FFCP PHASE1:Mm9::chr10:126515978..126516002,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=216439|HGNC=|MCL_coexpression_id=2|UniProt=Q3UHD9|association_with_transcript=15bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end|description=CAGE_peak_3_at_Agap2_5end|id=chr10:126515978..126516002,+|ontology_enrichment_celltype=CL:0000117!1.84e-13!23;CL:0000337!1.84e-13!23;CL:0000540!2.93e-07!33;CL:0000047!2.93e-07!33;CL:0000031!2.93e-07!33;CL:0000404!2.93e-07!33;CL:0002319!5.19e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.24e-19,23;CL:0000337,6.24e-19,23;CL:0000540,1.71e-11,33;CL:0000047,1.71e-11,33;CL:0000031,1.71e-11,33;CL:0000404,1.71e-11,33;CL:0002319,2.60e-10,43;CL:0000221,7.18e-10,44;CL:0000133,7.18e-10,44;CL:0000393,1.72e-08,39;CL:0000211,1.72e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.09e-26!52;UBERON:0005068!6.09e-26!52;UBERON:0006241!6.09e-26!52;UBERON:0007135!6.09e-26!52;UBERON:0000955!3.47e-25!50;UBERON:0006238!3.47e-25!50;UBERON:0001017!1.24e-24!73;UBERON:0005743!1.24e-24!73;UBERON:0002616!2.25e-24!49;UBERON:0000033!3.23e-24!63;UBERON:0002346!1.25e-23!71;UBERON:0003075!1.25e-23!71;UBERON:0007284!1.25e-23!71;UBERON:0000073!5.91e-23!75;UBERON:0001016!5.91e-23!75;UBERON:0004121!2.57e-21!102;UBERON:0000924!2.57e-21!102;UBERON:0006601!2.57e-21!102;UBERON:0003056!3.09e-20!49;UBERON:0003080!3.74e-20!40;UBERON:0002020!8.38e-20!34;UBERON:0002780!1.64e-19!39;UBERON:0001890!1.64e-19!39;UBERON:0006240!1.64e-19!39;UBERON:0002791!4.96e-17!29;UBERON:0003528!4.96e-17!29;UBERON:0001893!4.96e-17!29;UBERON:0007811!5.73e-13!86;UBERON:0000153!1.10e-12!94;UBERON:0000956!4.16e-12!21;UBERON:0001869!4.16e-12!21;UBERON:0000203!4.16e-12!21;UBERON:0002619!3.33e-10!17;UBERON:0002021!1.87e-08!10;UBERON:0000411!1.87e-08!10;UBERON:0001950!1.87e-08!10;UBERON:0000025!9.92e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-33,54;UBERON:0001017,4.32e-32,73;UBERON:0001049,1.67e-31,52;UBERON:0005068,1.67e-31,52;UBERON:0006241,1.67e-31,52;UBERON:0007135,1.67e-31,52;UBERON:0001016,1.15e-30,75;UBERON:0002346,2.56e-29,64;UBERON:0003075,2.56e-29,64;UBERON:0007284,2.56e-29,64;UBERON:0000955,1.32e-27,47;UBERON:0006238,1.32e-27,47;UBERON:0002020,7.71e-27,34;UBERON:0002616,1.69e-26,46;UBERON:0004121,1.65e-25,95;UBERON:0000924,1.65e-25,95;UBERON:0006601,1.65e-25,95;UBERON:0003056,1.15e-23,49;UBERON:0003080,1.43e-23,40;UBERON:0010371,2.35e-23,73;UBERON:0003528,8.51e-23,29;UBERON:0002791,8.51e-23,29;UBERON:0001893,8.51e-23,29;UBERON:0002780,1.14e-22,39;UBERON:0001890,1.14e-22,39;UBERON:0006240,1.14e-22,39;UBERON:0010314,1.35e-17,92;UBERON:0000956,1.17e-15,21;UBERON:0001869,1.17e-15,21;UBERON:0000203,1.17e-15,21;UBERON:0002619,6.95e-13,17;UBERON:0002021,1.27e-11,10;UBERON:0000411,1.27e-11,10;UBERON:0001950,1.27e-11,10;UBERON:0002420,2.61e-08,8;UBERON:0007245,2.61e-08,8;UBERON:0010009,2.61e-08,8;UBERON:0010011,2.61e-08,8;UBERON:0000454,2.61e-08,8;UBERON:0003076,3.19e-08,12;UBERON:0003057,3.19e-08,12;UBERON:0000025,3.66e-08,114|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.917733760808408,2.34717403304412,0.218025156380447,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0,12.5436205732951,11.6378015439847,13.3104594736298,1.0165335962074,0,0,0,0,4.49400165777607,3.07374644257244,3.11068836925433,4.99521971827255,2.73422449756797,12.8542942981712,9.718215801871,5.63457676388789,7.18841032636773,6.43453150627015,8.8092704799511,37.0293280447044,25.0378649207677,13.7161739239402,21.5910838901687,23.4411016750542,11.725685958058,15.1945904708554,24.2949213965128,11.490514833473,12.6710795911202,6.33758115806022,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,10.1922095882658,0,0,0,0,1.02765491747154,1.03575153458869,1.1875371125186,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0.587943535678524,0.251333182659351,0,1.44599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,22.2513405728776,13.4045892360611,0,0,0,0,17.6752954497691,74.5725982594361,15.2041766056566,95.9510247461366,56.7688315273334,29.9214784165767,43.3184172390913,0.712875546952214,0.497627882440372,0.252722758433675,2.52530227063769,0.130120442962704,0,0.540186389416048,1.05493372485001,1.36072998302656,1.40925092313335,2.15513966487376,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0,1.02891068203972,0.995171334092466,0,0,0,0,0,0,0,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0.492502392237286,1.13496333364198,0.438599962275997,1.09775057645525,1.07365135008297,116.921211401655,11.936935035997,0,0.528901133327089,0,0.464473343720877,0,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.974820435595601,0,0,0,0.189667900953082,0.342745537829186,0,0,0.387904974335251,0.49095073923223,0.7588384454910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| ||
|EntrezGene=216439 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q3UHD9 | |||
|association_with_transcript=15bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end | |||
|description=CAGE_peak_3_at_Agap2_5end | |||
|id=chr10:126515978..126516002,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.84e-13!23;CL:0000337!1.84e-13!23;CL:0000540!2.93e-07!33;CL:0000047!2.93e-07!33;CL:0000031!2.93e-07!33;CL:0000404!2.93e-07!33;CL:0002319!5.19e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.24e-19,23;CL:0000337,6.24e-19,23;CL:0000540,1.71e-11,33;CL:0000047,1.71e-11,33;CL:0000031,1.71e-11,33;CL:0000404,1.71e-11,33;CL:0002319,2.60e-10,43;CL:0000221,7.18e-10,44;CL:0000133,7.18e-10,44;CL:0000393,1.72e-08,39;CL:0000211,1.72e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.09e-26!52;UBERON:0005068!6.09e-26!52;UBERON:0006241!6.09e-26!52;UBERON:0007135!6.09e-26!52;UBERON:0000955!3.47e-25!50;UBERON:0006238!3.47e-25!50;UBERON:0001017!1.24e-24!73;UBERON:0005743!1.24e-24!73;UBERON:0002616!2.25e-24!49;UBERON:0000033!3.23e-24!63;UBERON:0002346!1.25e-23!71;UBERON:0003075!1.25e-23!71;UBERON:0007284!1.25e-23!71;UBERON:0000073!5.91e-23!75;UBERON:0001016!5.91e-23!75;UBERON:0004121!2.57e-21!102;UBERON:0000924!2.57e-21!102;UBERON:0006601!2.57e-21!102;UBERON:0003056!3.09e-20!49;UBERON:0003080!3.74e-20!40;UBERON:0002020!8.38e-20!34;UBERON:0002780!1.64e-19!39;UBERON:0001890!1.64e-19!39;UBERON:0006240!1.64e-19!39;UBERON:0002791!4.96e-17!29;UBERON:0003528!4.96e-17!29;UBERON:0001893!4.96e-17!29;UBERON:0007811!5.73e-13!86;UBERON:0000153!1.10e-12!94;UBERON:0000956!4.16e-12!21;UBERON:0001869!4.16e-12!21;UBERON:0000203!4.16e-12!21;UBERON:0002619!3.33e-10!17;UBERON:0002021!1.87e-08!10;UBERON:0000411!1.87e-08!10;UBERON:0001950!1.87e-08!10;UBERON:0000025!9.92e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-33,54;UBERON:0001017,4.32e-32,73;UBERON:0001049,1.67e-31,52;UBERON:0005068,1.67e-31,52;UBERON:0006241,1.67e-31,52;UBERON:0007135,1.67e-31,52;UBERON:0001016,1.15e-30,75;UBERON:0002346,2.56e-29,64;UBERON:0003075,2.56e-29,64;UBERON:0007284,2.56e-29,64;UBERON:0000955,1.32e-27,47;UBERON:0006238,1.32e-27,47;UBERON:0002020,7.71e-27,34;UBERON:0002616,1.69e-26,46;UBERON:0004121,1.65e-25,95;UBERON:0000924,1.65e-25,95;UBERON:0006601,1.65e-25,95;UBERON:0003056,1.15e-23,49;UBERON:0003080,1.43e-23,40;UBERON:0010371,2.35e-23,73;UBERON:0003528,8.51e-23,29;UBERON:0002791,8.51e-23,29;UBERON:0001893,8.51e-23,29;UBERON:0002780,1.14e-22,39;UBERON:0001890,1.14e-22,39;UBERON:0006240,1.14e-22,39;UBERON:0010314,1.35e-17,92;UBERON:0000956,1.17e-15,21;UBERON:0001869,1.17e-15,21;UBERON:0000203,1.17e-15,21;UBERON:0002619,6.95e-13,17;UBERON:0002021,1.27e-11,10;UBERON:0000411,1.27e-11,10;UBERON:0001950,1.27e-11,10;UBERON:0002420,2.61e-08,8;UBERON:0007245,2.61e-08,8;UBERON:0010009,2.61e-08,8;UBERON:0010011,2.61e-08,8;UBERON:0000454,2.61e-08,8;UBERON:0003076,3.19e-08,12;UBERON:0003057,3.19e-08,12;UBERON:0000025,3.66e-08,114 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.917733760808408,2.34717403304412,0.218025156380447,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0,12.5436205732951,11.6378015439847,13.3104594736298,1.0165335962074,0,0,0,0,4.49400165777607,3.07374644257244,3.11068836925433,4.99521971827255,2.73422449756797,12.8542942981712,9.718215801871,5.63457676388789,7.18841032636773,6.43453150627015,8.8092704799511,37.0293280447044,25.0378649207677,13.7161739239402,21.5910838901687,23.4411016750542,11.725685958058,15.1945904708554,24.2949213965128,11.490514833473,12.6710795911202,6.33758115806022,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,10.1922095882658,0,0,0,0,1.02765491747154,1.03575153458869,1.1875371125186,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0.587943535678524,0.251333182659351,0,1.44599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,22.2513405728776,13.4045892360611,0,0,0,0,17.6752954497691,74.5725982594361,15.2041766056566,95.9510247461366,56.7688315273334,29.9214784165767,43.3184172390913,0.712875546952214,0.497627882440372,0.252722758433675,2.52530227063769,0.130120442962704,0,0.540186389416048,1.05493372485001,1.36072998302656,1.40925092313335,2.15513966487376,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0,1.02891068203972,0.995171334092466,0,0,0,0,0,0,0,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0.492502392237286,1.13496333364198,0.438599962275997,1.09775057645525,1.07365135008297,116.921211401655,11.936935035997,0,0.528901133327089,0,0.464473343720877,0,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.974820435595601,0,0,0,0.189667900953082,0.342745537829186,0,0,0.387904974335251,0.49095073923223,0.758838445491087,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0.234690248288502,0.502518772325447,0,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0.491764273019036,0,6.58257418949947,4.68846746368813,1.3114795630134,0.757412781613119,0,0,0.215423397732799,0,0,0,0,1.16902343164525,0,115.996995228272,1.70328102249922,1.6025904330053,0.488660878060728,5.77395430403874,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,0,0,0,0.632073515871632,0,0,2.04263763452273,0.540183282093931,0.646793418913773,0.857348140126369,2.30542303734956,0.713475270408282,2.63278432963394,2.13125464380219,0,0,0.441056796109924,0.8244312647074,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,8.71498919449395,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.756037385752609,0.209088296014469,0,0.674321731924103,0.578574190077352,0,0.388844919875379,0.621339313086926,0,0.299033092087958,0.165458490457098,0.972255941720238,0.645799117388655,0.337912250981556,0.352071715937262,0.5208175393758,0.314578033277133,0.241584120826006,0.576060012515731,0,0.608175645870493,0.308132871494482,0,0,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,0.221985953374065,0,0,0.772758376128762,1.12609485270709,3.84618410961257,0.643105137237198,0,100.525827985838,101.271552031579,101.975401392213,115.313485352614,83.5800674120184,92.9134493789332,101.253375034771,95.918416286759,104.675896475351,100.445500479853,0.415149390336707,1.19707462020309,0.853668028770671,1.70174701947806,1.88651846365184,1.47074806760011,2.44471400581777,2.26638562962784,2.88827288632634,2.52697211763797,2.5347929989024,1.69763707247469,1.49826411951812,1.34452820050225,1.43588672389033,3.33405583898152,1.97003354106254,1.54327376370964,2.06042950401653,2.64958056241915,1.02860775715625,1.77475806159337,0.715308569841963,0.581385666529314,1.78807822789128,1.18460451048347,0.914639864363863,0.789209134313529,1.7654534799962,1.12228454331548,1.54225523561426,0.985044823755635,3.27384834535751,0.77468420592983,2.3148793317737,4.99621155875892,3.27504251823572,1.71896843238639,0.765153328275374,1.32354851471709,0.695603506861264 | |||
|short_description=p3@Agap2 | |||
}} |
Revision as of 15:58, 12 September 2013
Short description: | p3@Agap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Agap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 15bp_to_ENSMUST00000039259, ENSMUST00000105254, NM_001033263, uc007hhx.1, uc007hhy.1_5end |
EntrezGene: | Agap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.24e-19 | 23 |
neuroblast (sensu Vertebrata) | 6.24e-19 | 23 |
neuron | 1.71e-11 | 33 |
neuronal stem cell | 1.71e-11 | 33 |
neuroblast | 1.71e-11 | 33 |
electrically signaling cell | 1.71e-11 | 33 |
neural cell | 2.60e-10 | 43 |
ectodermal cell | 7.18e-10 | 44 |
neurectodermal cell | 7.18e-10 | 44 |
electrically responsive cell | 1.72e-08 | 39 |
electrically active cell | 1.72e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.