FFCP PHASE1:Mm9::chr11:41813786..41813844,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14406|HGNC=|MCL_coexpression_id=1|UniProt=Q3UVW2,Q8C8H5|association_with_transcript=0bp_to_ENSMUST00000109292,ENSMUST00000163704,NM_177408_5end|description=CAGE_peak_1_at_Gabrg2_5end|id=chr11:41813786..41813844,-|ontology_enrichment_celltype=CL:0000117!2.38e-13!23;CL:0000337!2.38e-13!23;CL:0000540!7.78e-13!33;CL:0000047!7.78e-13!33;CL:0000031!7.78e-13!33;CL:0000404!7.78e-13!33;CL:0002319!3.33e-09!43;CL:0000393!3.65e-09!39;CL:0000211!3.65e-09!39;CL:0000221!9.60e-09!44;CL:0000133!9.60e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.48e-16,23;CL:0000337,3.48e-16,23;CL:0000540,1.31e-10,33;CL:0000047,1.31e-10,33;CL:0000031,1.31e-10,33;CL:0000404,1.31e-10,33;CL:0000393,7.58e-08,39;CL:0000211,7.58e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.59e-30!71;UBERON:0003075!2.59e-30!71;UBERON:0007284!2.59e-30!71;UBERON:0000073!5.20e-29!75;UBERON:0001016!5.20e-29!75;UBERON:0001017!1.61e-28!73;UBERON:0005743!1.61e-28!73;UBERON:0004121!5.64e-28!102;UBERON:0000924!5.64e-28!102;UBERON:0006601!5.64e-28!102;UBERON:0000033!1.06e-25!63;UBERON:0001049!2.21e-25!52;UBERON:0005068!2.21e-25!52;UBERON:0006241!2.21e-25!52;UBERON:0007135!2.21e-25!52;UBERON:0000955!1.05e-24!50;UBERON:0006238!1.05e-24!50;UBERON:0003056!4.01e-24!49;UBERON:0002616!7.74e-24!49;UBERON:0003080!5.20e-20!40;UBERON:0002020!3.34e-19!34;UBERON:0002780!4.16e-19!39;UBERON:0001890!4.16e-19!39;UBERON:0006240!4.16e-19!39;UBERON:0002791!2.85e-16!29;UBERON:0003528!2.85e-16!29;UBERON:0001893!2.85e-16!29;UBERON:0007811!5.54e-14!86;UBERON:0000153!4.73e-11!94;UBERON:0000956!5.17e-11!21;UBERON:0001869!5.17e-11!21;UBERON:0000203!5.17e-11!21;UBERON:0002619!1.69e-09!17;UBERON:0002021!1.92e-09!10;UBERON:0000411!1.92e-09!10;UBERON:0001950!1.92e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.17e-32,64;UBERON:0003075,5.17e-32,64;UBERON:0007284,5.17e-32,64;UBERON:0000073,6.29e-32,54;UBERON:0001049,6.38e-30,52;UBERON:0005068,6.38e-30,52;UBERON:0006241,6.38e-30,52;UBERON:0007135,6.38e-30,52;UBERON:0001017,7.28e-28,73;UBERON:0003056,3.51e-27,49;UBERON:0001016,1.32e-26,75;UBERON:0000955,3.72e-26,47;UBERON:0006238,3.72e-26,47;UBERON:0010371,1.01e-25,73;UBERON:0004121,2.52e-25,95;UBERON:0000924,2.52e-25,95;UBERON:0006601,2.52e-25,95;UBERON:0002616,4.09e-25,46;UBERON:0002020,7.66e-24,34;UBERON:0003080,6.60e-23,40;UBERON:0002780,8.32e-22,39;UBERON:0001890,8.32e-22,39;UBERON:0006240,8.32e-22,39;UBERON:0003528,3.41e-20,29;UBERON:0002791,3.41e-20,29;UBERON:0001893,3.41e-20,29;UBERON:0010314,2.35e-17,92;UBERON:0000956,1.21e-13,21;UBERON:0001869,1.21e-13,21;UBERON:0000203,1.21e-13,21;UBERON:0002619,8.99e-12,17;UBERON:0002021,2.44e-11,10;UBERON:0000411,2.44e-11,10;UBERON:0001950,2.44e-11,10;UBERON:0002420,8.22e-08,8;UBERON:0007245,8.22e-08,8;UBERON:0010009,8.22e-08,8;UBERON:0010011,8.22e-08,8;UBERON:0000454,8.22e-08,8;UBERON:0003076,2.13e-07,12;UBERON:0003057,2.13e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,7.93486468908049,6.33831403506179,0,0,0,0,0,0.299600110518405,0,2.90330914463737,1.21505344498522,1.68259969081106,4.28476476605705,4.8591079009355,4.89963196859816,1.53352753629178,2.75765635983006,38.540558349786,59.1192375334419,66.8188419664659,7.51751840062105,7.593474419,11.9810075228055,36.0146068711781,52.3369227329462,36.213184723104,15.3206864446307,25.4845308630394,13.4207600994216,0.605809546665472,0.831287161174641,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,1.03909497345377,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.587943535678524,0.251333182659351,0,0,0,0,0,0.484875253135222,0,66.4612409216212,92.1565509979202,0,0,0,0,105.90198205921,43.4625572677695,20.4816593943969,101.339578672097,92.5689955535797,75.8426362642394,71.7106382759489,0,0,0,5.89237196482127,0.130120442962704,2.06911893990126,2.16074555766419,4.52114453507145,5.10273743634959,8.07116437794554,6.46541899462129,18.1092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.1159794256509,27.2697222805104,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,53.1422452859591,63.6459458195663,0,0,0.315508219416257,0,0.646270193198397,0.716906393857656,1.11399337041197,0.849229592366497,1.21443210502468,0.584511715822624,0.790575555893047,72.6186175113284,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,33.3630813638712,0.540183282093931,0,0.428674070063185,4.07882537377229,1.24858172321449,3.9491764944509,1.522324745573,0,0,0,0,0,0,0,0,0.291480836629851,53.9587628850583,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821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| ||
|EntrezGene=14406 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q3UVW2,Q8C8H5 | |||
|association_with_transcript=0bp_to_ENSMUST00000109292,ENSMUST00000163704,NM_177408_5end | |||
|description=CAGE_peak_1_at_Gabrg2_5end | |||
|id=chr11:41813786..41813844,- | |||
|ontology_enrichment_celltype=CL:0000117!2.38e-13!23;CL:0000337!2.38e-13!23;CL:0000540!7.78e-13!33;CL:0000047!7.78e-13!33;CL:0000031!7.78e-13!33;CL:0000404!7.78e-13!33;CL:0002319!3.33e-09!43;CL:0000393!3.65e-09!39;CL:0000211!3.65e-09!39;CL:0000221!9.60e-09!44;CL:0000133!9.60e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.48e-16,23;CL:0000337,3.48e-16,23;CL:0000540,1.31e-10,33;CL:0000047,1.31e-10,33;CL:0000031,1.31e-10,33;CL:0000404,1.31e-10,33;CL:0000393,7.58e-08,39;CL:0000211,7.58e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.59e-30!71;UBERON:0003075!2.59e-30!71;UBERON:0007284!2.59e-30!71;UBERON:0000073!5.20e-29!75;UBERON:0001016!5.20e-29!75;UBERON:0001017!1.61e-28!73;UBERON:0005743!1.61e-28!73;UBERON:0004121!5.64e-28!102;UBERON:0000924!5.64e-28!102;UBERON:0006601!5.64e-28!102;UBERON:0000033!1.06e-25!63;UBERON:0001049!2.21e-25!52;UBERON:0005068!2.21e-25!52;UBERON:0006241!2.21e-25!52;UBERON:0007135!2.21e-25!52;UBERON:0000955!1.05e-24!50;UBERON:0006238!1.05e-24!50;UBERON:0003056!4.01e-24!49;UBERON:0002616!7.74e-24!49;UBERON:0003080!5.20e-20!40;UBERON:0002020!3.34e-19!34;UBERON:0002780!4.16e-19!39;UBERON:0001890!4.16e-19!39;UBERON:0006240!4.16e-19!39;UBERON:0002791!2.85e-16!29;UBERON:0003528!2.85e-16!29;UBERON:0001893!2.85e-16!29;UBERON:0007811!5.54e-14!86;UBERON:0000153!4.73e-11!94;UBERON:0000956!5.17e-11!21;UBERON:0001869!5.17e-11!21;UBERON:0000203!5.17e-11!21;UBERON:0002619!1.69e-09!17;UBERON:0002021!1.92e-09!10;UBERON:0000411!1.92e-09!10;UBERON:0001950!1.92e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.17e-32,64;UBERON:0003075,5.17e-32,64;UBERON:0007284,5.17e-32,64;UBERON:0000073,6.29e-32,54;UBERON:0001049,6.38e-30,52;UBERON:0005068,6.38e-30,52;UBERON:0006241,6.38e-30,52;UBERON:0007135,6.38e-30,52;UBERON:0001017,7.28e-28,73;UBERON:0003056,3.51e-27,49;UBERON:0001016,1.32e-26,75;UBERON:0000955,3.72e-26,47;UBERON:0006238,3.72e-26,47;UBERON:0010371,1.01e-25,73;UBERON:0004121,2.52e-25,95;UBERON:0000924,2.52e-25,95;UBERON:0006601,2.52e-25,95;UBERON:0002616,4.09e-25,46;UBERON:0002020,7.66e-24,34;UBERON:0003080,6.60e-23,40;UBERON:0002780,8.32e-22,39;UBERON:0001890,8.32e-22,39;UBERON:0006240,8.32e-22,39;UBERON:0003528,3.41e-20,29;UBERON:0002791,3.41e-20,29;UBERON:0001893,3.41e-20,29;UBERON:0010314,2.35e-17,92;UBERON:0000956,1.21e-13,21;UBERON:0001869,1.21e-13,21;UBERON:0000203,1.21e-13,21;UBERON:0002619,8.99e-12,17;UBERON:0002021,2.44e-11,10;UBERON:0000411,2.44e-11,10;UBERON:0001950,2.44e-11,10;UBERON:0002420,8.22e-08,8;UBERON:0007245,8.22e-08,8;UBERON:0010009,8.22e-08,8;UBERON:0010011,8.22e-08,8;UBERON:0000454,8.22e-08,8;UBERON:0003076,2.13e-07,12;UBERON:0003057,2.13e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,7.93486468908049,6.33831403506179,0,0,0,0,0,0.299600110518405,0,2.90330914463737,1.21505344498522,1.68259969081106,4.28476476605705,4.8591079009355,4.89963196859816,1.53352753629178,2.75765635983006,38.540558349786,59.1192375334419,66.8188419664659,7.51751840062105,7.593474419,11.9810075228055,36.0146068711781,52.3369227329462,36.213184723104,15.3206864446307,25.4845308630394,13.4207600994216,0.605809546665472,0.831287161174641,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,1.03909497345377,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.587943535678524,0.251333182659351,0,0,0,0,0,0.484875253135222,0,66.4612409216212,92.1565509979202,0,0,0,0,105.90198205921,43.4625572677695,20.4816593943969,101.339578672097,92.5689955535797,75.8426362642394,71.7106382759489,0,0,0,5.89237196482127,0.130120442962704,2.06911893990126,2.16074555766419,4.52114453507145,5.10273743634959,8.07116437794554,6.46541899462129,18.1092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.1159794256509,27.2697222805104,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,53.1422452859591,63.6459458195663,0,0,0.315508219416257,0,0.646270193198397,0.716906393857656,1.11399337041197,0.849229592366497,1.21443210502468,0.584511715822624,0.790575555893047,72.6186175113284,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,33.3630813638712,0.540183282093931,0,0.428674070063185,4.07882537377229,1.24858172321449,3.9491764944509,1.522324745573,0,0,0,0,0,0,0,0,0.291480836629851,53.9587628850583,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,50.827665835536,73.6520378411483,68.7474616127276,59.8049074556033,74.673994655,67.2300568676833,71.5523850245714,86.9119922222745,94.2536210687146,62.1312374102184,0.62272408550506,2.39414924040619,3.75613932659095,3.40349403895612,2.93458427679175,1.83843508450014,5.778414922842,4.12070114477788,2.24643446714271,3.53776096469316,5.57654459758527,5.09291121742406,5.3375659257833,4.92993673517493,4.7671439233159,7.1444053692461,5.09891034157364,5.40145817298374,4.53294490883637,3.97437084362873,3.77156177623957,3.90446773550542,6.19934093863034,4.65108533223451,4.14081273827455,4.73841804193388,3.84148743032822,5.5244639401947,4.20992752922171,3.36685362994643,2.84724043498018,3.64466584789585,2.86461730218783,2.16911577660352,2.89359916471712,4.99621155875892,3.50897412668113,4.51229213501426,2.48674831689496,1.32354851471709,1.85494268496337 | |||
|short_description=p1@Gabrg2 | |||
}} |
Revision as of 19:38, 12 September 2013
Short description: | p1@Gabrg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gabrg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000109292, ENSMUST00000163704, NM_177408_5end |
EntrezGene: | Gabrg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.48e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.48e-16 | 23 |
neuron | 1.31e-10 | 33 |
neuronal stem cell | 1.31e-10 | 33 |
neuroblast | 1.31e-10 | 33 |
electrically signaling cell | 1.31e-10 | 33 |
electrically responsive cell | 7.58e-08 | 39 |
electrically active cell | 7.58e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.