FFCP PHASE1:Mm9::chr13:100204591..100204603,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100204591..100204603,-|id=chr13:100204591..100204603,-|ontology_enrichment_celltype=CL:0000540!1.07e-10!33;CL:0000047!1.07e-10!33;CL:0000031!1.07e-10!33;CL:0000404!1.07e-10!33;CL:0000117!1.64e-10!23;CL:0000337!1.64e-10!23;CL:0000393!4.68e-08!39;CL:0000211!4.68e-08!39;CL:0002319!4.37e-07!43;CL:0000221!4.99e-07!44;CL:0000133!4.99e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.81e-21,23;CL:0000337,2.81e-21,23;CL:0000540,4.91e-18,33;CL:0000047,4.91e-18,33;CL:0000031,4.91e-18,33;CL:0000404,4.91e-18,33;CL:0000393,2.45e-14,39;CL:0000211,2.45e-14,39;CL:0002319,1.86e-12,43;CL:0000221,4.82e-12,44;CL:0000133,4.82e-12,44;CL:0002609,4.68e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.50e-20!71;UBERON:0003075!1.50e-20!71;UBERON:0007284!1.50e-20!71;UBERON:0001017!1.93e-19!73;UBERON:0005743!1.93e-19!73;UBERON:0000073!4.68e-19!75;UBERON:0001016!4.68e-19!75;UBERON:0000033!7.33e-18!63;UBERON:0003056!1.21e-17!49;UBERON:0004121!1.66e-17!102;UBERON:0000924!1.66e-17!102;UBERON:0006601!1.66e-17!102;UBERON:0001049!2.20e-17!52;UBERON:0005068!2.20e-17!52;UBERON:0006241!2.20e-17!52;UBERON:0007135!2.20e-17!52;UBERON:0000955!5.05e-17!50;UBERON:0006238!5.05e-17!50;UBERON:0002616!1.13e-16!49;UBERON:0003080!1.18e-14!40;UBERON:0002780!1.30e-14!39;UBERON:0001890!1.30e-14!39;UBERON:0006240!1.30e-14!39;UBERON:0002020!1.53e-14!34;UBERON:0002791!2.76e-12!29;UBERON:0003528!2.76e-12!29;UBERON:0001893!2.76e-12!29;UBERON:0000956!1.04e-08!21;UBERON:0001869!1.04e-08!21;UBERON:0000203!1.04e-08!21;UBERON:0007811!2.97e-08!86;UBERON:0000025!1.74e-07!114;UBERON:0000153!3.39e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.56e-29,54;UBERON:0002346,7.05e-29,64;UBERON:0003075,7.05e-29,64;UBERON:0007284,7.05e-29,64;UBERON:0003056,1.31e-27,49;UBERON:0001017,1.18e-26,73;UBERON:0004121,9.84e-26,95;UBERON:0000924,9.84e-26,95;UBERON:0006601,9.84e-26,95;UBERON:0001016,1.17e-25,75;UBERON:0002020,4.95e-25,34;UBERON:0001049,2.05e-24,52;UBERON:0005068,2.05e-24,52;UBERON:0006241,2.05e-24,52;UBERON:0007135,2.05e-24,52;UBERON:0010371,4.89e-24,73;UBERON:0002780,6.49e-24,39;UBERON:0001890,6.49e-24,39;UBERON:0006240,6.49e-24,39;UBERON:0003080,4.00e-23,40;UBERON:0003528,1.53e-22,29;UBERON:0002791,1.53e-22,29;UBERON:0001893,1.53e-22,29;UBERON:0002616,2.47e-22,46;UBERON:0000955,1.10e-21,47;UBERON:0006238,1.10e-21,47;UBERON:0010314,3.64e-19,92;UBERON:0000956,7.61e-16,21;UBERON:0001869,7.61e-16,21;UBERON:0000203,7.61e-16,21;UBERON:0002021,2.84e-13,10;UBERON:0000411,2.84e-13,10;UBERON:0001950,2.84e-13,10;UBERON:0002619,1.15e-12,17;UBERON:0000025,7.10e-08,114;UBERON:0002420,7.68e-08,8;UBERON:0007245,7.68e-08,8;UBERON:0010009,7.68e-08,8;UBERON:0010011,7.68e-08,8;UBERON:0000454,7.68e-08,8;UBERON:0004111,7.97e-07,122|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,3.84401275633236,0,2.53532561402472,0,0,0,0,0,0,0.384218305321555,4.25127410464758,2.8351247049655,2.73422449756797,0.571301968807607,0.220868540951614,2.08234358665422,2.01275489138296,0,2.20231761998777,4.72443150915195,6.91229399653096,2.63772575460388,3.11057988248193,4.16730696445408,1.95428099300967,0,7.18151764551008,2.94628585473668,3.27454865837937,4.10078780815661,0,0.453429360640713,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0,0.753613202763113,1.05829836422134,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,0.299581278809645,0.915001205637253,6.03140890141749,0.869121600961382,2.55715457330331,2.28566849015516,2.59586020908412,0.916554274652847,0,0,0,1.04096354370163,0.459804208866946,0.540186389416048,2.41127708537144,1.29269348387523,1.92170580427275,1.59292931751539,1.55222022443409,0,0.378212160335639,0,0.219195732427575,0.556094498451196,0,0,0.398068533636986,0,0,0,0.207125772535502,0.938104239924385,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,1.16266972375204,0.804820204198858,0.350296027101508,0.493679549740441,0.492502392237286,0.0810688095458557,0,0,0,0.420579897128254,8.43817821510132,0,0,0.639864751605702,0.464473343720877,0,0,0.444756087689741,0,0,0.494096864172033,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.280543279561274,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0.325929952884052,0.509235257325564,0,0,0,0.195133647857799,0.472905432318573,0.664394068946325,0.637819074629948,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0,0.80275294993896,1.64096361229084,0.327869890753351,0,0,0.780877488593277,1.07711698866399,0.716906393857656,1.11399337041197,0.566153061577665,0,1.75353514746787,0.395287777946524,0.642642632843614,0.283880170416537,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,1.08036656418786,0.388076051348264,0.214337035031592,0.709360934569094,1.60531935841864,1.15184314421485,0,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.756037385752609,0.209088296014469,0.436725127492355,0.674321731924103,0.41326727862668,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.506868376472335,0.469428954583016,1.17183946359555,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,1.6942555278512,2.30162618253588,4.58316410751517,3.09335728218638,5.48066015816514,4.5323633843382,4.05013500139084,3.15224842256954,2.26571204492102,0,1.45302286617847,0.399024873401031,0.341467211508268,0.243106717068294,0,0.551530525350042,0.888986911206461,0.618105171716683,0.64183841918363,0.252697211763798,0,0.377252682772152,0.749132059759059,0.448176066834085,0.516919220600519,0,0.811190281613988,0.38581844092741,0,0.294397840268795,1.37147700954166,1.95223386775271,0.238436189947321,0.726732083161643,0.376437521661322,0.25384382367503,2.19513567447327,2.89376682581627,1.08643291076689,1.68342681497322,0.711810108745045,1.18205378850676,0,0.77468420592983,0,0,0.233931608445408,0,0,0,0|short_description=p@chr13:100204591..100204603,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100204591..100204603,- | |||
|id=chr13:100204591..100204603,- | |||
|ontology_enrichment_celltype=CL:0000540!1.07e-10!33;CL:0000047!1.07e-10!33;CL:0000031!1.07e-10!33;CL:0000404!1.07e-10!33;CL:0000117!1.64e-10!23;CL:0000337!1.64e-10!23;CL:0000393!4.68e-08!39;CL:0000211!4.68e-08!39;CL:0002319!4.37e-07!43;CL:0000221!4.99e-07!44;CL:0000133!4.99e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.81e-21,23;CL:0000337,2.81e-21,23;CL:0000540,4.91e-18,33;CL:0000047,4.91e-18,33;CL:0000031,4.91e-18,33;CL:0000404,4.91e-18,33;CL:0000393,2.45e-14,39;CL:0000211,2.45e-14,39;CL:0002319,1.86e-12,43;CL:0000221,4.82e-12,44;CL:0000133,4.82e-12,44;CL:0002609,4.68e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.50e-20!71;UBERON:0003075!1.50e-20!71;UBERON:0007284!1.50e-20!71;UBERON:0001017!1.93e-19!73;UBERON:0005743!1.93e-19!73;UBERON:0000073!4.68e-19!75;UBERON:0001016!4.68e-19!75;UBERON:0000033!7.33e-18!63;UBERON:0003056!1.21e-17!49;UBERON:0004121!1.66e-17!102;UBERON:0000924!1.66e-17!102;UBERON:0006601!1.66e-17!102;UBERON:0001049!2.20e-17!52;UBERON:0005068!2.20e-17!52;UBERON:0006241!2.20e-17!52;UBERON:0007135!2.20e-17!52;UBERON:0000955!5.05e-17!50;UBERON:0006238!5.05e-17!50;UBERON:0002616!1.13e-16!49;UBERON:0003080!1.18e-14!40;UBERON:0002780!1.30e-14!39;UBERON:0001890!1.30e-14!39;UBERON:0006240!1.30e-14!39;UBERON:0002020!1.53e-14!34;UBERON:0002791!2.76e-12!29;UBERON:0003528!2.76e-12!29;UBERON:0001893!2.76e-12!29;UBERON:0000956!1.04e-08!21;UBERON:0001869!1.04e-08!21;UBERON:0000203!1.04e-08!21;UBERON:0007811!2.97e-08!86;UBERON:0000025!1.74e-07!114;UBERON:0000153!3.39e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.56e-29,54;UBERON:0002346,7.05e-29,64;UBERON:0003075,7.05e-29,64;UBERON:0007284,7.05e-29,64;UBERON:0003056,1.31e-27,49;UBERON:0001017,1.18e-26,73;UBERON:0004121,9.84e-26,95;UBERON:0000924,9.84e-26,95;UBERON:0006601,9.84e-26,95;UBERON:0001016,1.17e-25,75;UBERON:0002020,4.95e-25,34;UBERON:0001049,2.05e-24,52;UBERON:0005068,2.05e-24,52;UBERON:0006241,2.05e-24,52;UBERON:0007135,2.05e-24,52;UBERON:0010371,4.89e-24,73;UBERON:0002780,6.49e-24,39;UBERON:0001890,6.49e-24,39;UBERON:0006240,6.49e-24,39;UBERON:0003080,4.00e-23,40;UBERON:0003528,1.53e-22,29;UBERON:0002791,1.53e-22,29;UBERON:0001893,1.53e-22,29;UBERON:0002616,2.47e-22,46;UBERON:0000955,1.10e-21,47;UBERON:0006238,1.10e-21,47;UBERON:0010314,3.64e-19,92;UBERON:0000956,7.61e-16,21;UBERON:0001869,7.61e-16,21;UBERON:0000203,7.61e-16,21;UBERON:0002021,2.84e-13,10;UBERON:0000411,2.84e-13,10;UBERON:0001950,2.84e-13,10;UBERON:0002619,1.15e-12,17;UBERON:0000025,7.10e-08,114;UBERON:0002420,7.68e-08,8;UBERON:0007245,7.68e-08,8;UBERON:0010009,7.68e-08,8;UBERON:0010011,7.68e-08,8;UBERON:0000454,7.68e-08,8;UBERON:0004111,7.97e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,3.84401275633236,0,2.53532561402472,0,0,0,0,0,0,0.384218305321555,4.25127410464758,2.8351247049655,2.73422449756797,0.571301968807607,0.220868540951614,2.08234358665422,2.01275489138296,0,2.20231761998777,4.72443150915195,6.91229399653096,2.63772575460388,3.11057988248193,4.16730696445408,1.95428099300967,0,7.18151764551008,2.94628585473668,3.27454865837937,4.10078780815661,0,0.453429360640713,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0,0.753613202763113,1.05829836422134,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,0.299581278809645,0.915001205637253,6.03140890141749,0.869121600961382,2.55715457330331,2.28566849015516,2.59586020908412,0.916554274652847,0,0,0,1.04096354370163,0.459804208866946,0.540186389416048,2.41127708537144,1.29269348387523,1.92170580427275,1.59292931751539,1.55222022443409,0,0.378212160335639,0,0.219195732427575,0.556094498451196,0,0,0.398068533636986,0,0,0,0.207125772535502,0.938104239924385,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,1.16266972375204,0.804820204198858,0.350296027101508,0.493679549740441,0.492502392237286,0.0810688095458557,0,0,0,0.420579897128254,8.43817821510132,0,0,0.639864751605702,0.464473343720877,0,0,0.444756087689741,0,0,0.494096864172033,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.280543279561274,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0.325929952884052,0.509235257325564,0,0,0,0.195133647857799,0.472905432318573,0.664394068946325,0.637819074629948,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0,0.80275294993896,1.64096361229084,0.327869890753351,0,0,0.780877488593277,1.07711698866399,0.716906393857656,1.11399337041197,0.566153061577665,0,1.75353514746787,0.395287777946524,0.642642632843614,0.283880170416537,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,1.08036656418786,0.388076051348264,0.214337035031592,0.709360934569094,1.60531935841864,1.15184314421485,0,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.756037385752609,0.209088296014469,0.436725127492355,0.674321731924103,0.41326727862668,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.506868376472335,0.469428954583016,1.17183946359555,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,1.6942555278512,2.30162618253588,4.58316410751517,3.09335728218638,5.48066015816514,4.5323633843382,4.05013500139084,3.15224842256954,2.26571204492102,0,1.45302286617847,0.399024873401031,0.341467211508268,0.243106717068294,0,0.551530525350042,0.888986911206461,0.618105171716683,0.64183841918363,0.252697211763798,0,0.377252682772152,0.749132059759059,0.448176066834085,0.516919220600519,0,0.811190281613988,0.38581844092741,0,0.294397840268795,1.37147700954166,1.95223386775271,0.238436189947321,0.726732083161643,0.376437521661322,0.25384382367503,2.19513567447327,2.89376682581627,1.08643291076689,1.68342681497322,0.711810108745045,1.18205378850676,0,0.77468420592983,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr13:100204591..100204603,- | |||
}} |
Revision as of 23:41, 12 September 2013
Short description: | p@chr13:100204591..100204603, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100204591..100204603, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.81e-21 | 23 |
neuroblast (sensu Vertebrata) | 2.81e-21 | 23 |
neuron | 4.91e-18 | 33 |
neuronal stem cell | 4.91e-18 | 33 |
neuroblast | 4.91e-18 | 33 |
electrically signaling cell | 4.91e-18 | 33 |
electrically responsive cell | 2.45e-14 | 39 |
electrically active cell | 2.45e-14 | 39 |
neural cell | 1.86e-12 | 43 |
ectodermal cell | 4.82e-12 | 44 |
neurectodermal cell | 4.82e-12 | 44 |
neuron of cerebral cortex | 4.68e-07 | 6 |
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