FFCP PHASE1:Hg19::chr3:98699909..98699935,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=7bp_to_ENST00000473756_5end|coexpression_cluster_id=C1081|description=CAGE_peak_3_at_ENST00000473756_5end|id=chr3:98699909..98699935,+|ontology_enrichment_celltype=CL:0000220!2.12e-16!246;CL:0000548!3.10e-16!679;CL:0000004!3.10e-16!679;CL:0000255!3.10e-16!679;CL:0002321!5.41e-16!248;CL:0000012!7.63e-16!682;CL:0000680!1.46e-14!57;CL:0000056!1.46e-14!57;CL:0000355!1.46e-14!57;CL:0000187!4.42e-14!54;CL:0000183!6.43e-14!59;CL:0000192!3.67e-13!42;CL:0000514!3.67e-13!42;CL:0000359!5.02e-13!32;CL:0002371!1.25e-12!591;CL:0000393!5.22e-12!60;CL:0000211!5.22e-12!60;CL:0000144!5.53e-12!625;CL:0000003!7.85e-12!722;CL:0000055!2.58e-11!180;CL:0000066!1.67e-10!254;CL:1000497!4.24e-09!18;CL:0002518!4.24e-09!18;CL:0000222!5.47e-09!119;CL:1000507!3.16e-08!12;CL:1000494!3.16e-08!12;CL:1000449!6.64e-08!16;CL:0002539!7.82e-08!10|ontology_enrichment_celltype_v019=CL:1000507;1.97e-16;10!CL:1000494;1.97e-16;10!CL:1000497;3.05e-16;17!CL:0002518;3.05e-16;17!CL:1000449;2.55e-14;15!CL:0000359;7.46e-13;32!CL:0002681;2.30e-10;12!CL:0002584;2.30e-10;12!CL:0000192;4.06e-10;43!CL:0000306;2.88e-07;4!CL:0002222;2.88e-07;4!CL:0002224;2.88e-07;4!CL:0002594;7.68e-07;4|ontology_enrichment_celltype_v019_2=CL:1000507,2.35e-16,10;CL:1000494,2.35e-16,10;CL:1000497,2.96e-16,17;CL:0002518,2.96e-16,17;CL:1000449,2.98e-14,15;CL:0000359,1.29e-13,32;CL:0000066,2.05e-13,253;CL:0000192,3.71e-12,43;CL:0000514,3.71e-12,43;CL:0002681,2.65e-10,12;CL:0002584,2.65e-10,12;CL:0000680,2.82e-09,58;CL:0000056,2.82e-09,58;CL:0000355,2.82e-09,58;CL:0000187,3.60e-09,55;CL:0002321,4.92e-08,250;CL:0000393,1.13e-07,61;CL:0000211,1.13e-07,61;CL:0000306,2.11e-07,4;CL:0002222,2.11e-07,4;CL:0002224,2.11e-07,4;CL:0002594,8.54e-07,4|ontology_enrichment_development_v019=CL:0000514;4.06e-10;43|ontology_enrichment_disease=DOID:120!3.69e-09!27;DOID:193!4.50e-08!29;DOID:2394!1.47e-07!14|ontology_enrichment_disease_v019=DOID:120;2.16e-07;27!DOID:0060072;3.30e-07;4|ontology_enrichment_disease_v019_2=DOID:120,2.80e-07,27;DOID:0060072,3.37e-07,4|ontology_enrichment_uberon=UBERON:0005256!3.26e-19!143;UBERON:0000486!8.92e-17!82;UBERON:0000119!9.51e-16!312;UBERON:0000483!7.86e-15!309;UBERON:0004290!9.42e-15!70;UBERON:0000914!3.76e-14!83;UBERON:0002329!3.76e-14!83;UBERON:0003077!3.76e-14!83;UBERON:0003059!3.76e-14!83;UBERON:0007282!3.76e-14!83;UBERON:0009618!3.76e-14!83;UBERON:0007285!3.76e-14!83;UBERON:0002100!1.83e-13!216;UBERON:0001134!1.04e-12!61;UBERON:0002036!1.04e-12!61;UBERON:0003082!1.04e-12!61;UBERON:0002385!6.93e-12!63;UBERON:0001015!6.93e-12!63;UBERON:0000383!6.93e-12!63;UBERON:0003104!1.34e-11!238;UBERON:0009142!1.34e-11!238;UBERON:0003914!1.77e-11!118;UBERON:0000490!1.97e-11!138;UBERON:0007625!6.68e-11!11;UBERON:0000475!8.34e-11!365;UBERON:0001637!1.27e-10!42;UBERON:0003509!1.27e-10!42;UBERON:0004572!1.27e-10!42;UBERON:0000481!2.32e-10!347;UBERON:0004573!1.10e-09!33;UBERON:0004571!1.10e-09!33;UBERON:0006554!2.60e-08!44;UBERON:0009773!3.16e-08!12;UBERON:0001231!3.16e-08!12;UBERON:0004810!3.16e-08!12;UBERON:0001008!6.12e-08!45;UBERON:0004211!6.64e-08!16;UBERON:0001285!6.64e-08!16;UBERON:0007684!6.64e-08!16;UBERON:0003220!6.64e-08!16;UBERON:0004208!6.64e-08!16;UBERON:0004237!7.82e-08!10;UBERON:0004695!7.82e-08!10;UBERON:0002111!7.82e-08!10;UBERON:0004178!7.82e-08!10;UBERON:0000058!1.42e-07!26;UBERON:0006555!3.43e-07!17;UBERON:0005103!3.43e-07!17;UBERON:0000083!3.43e-07!17;UBERON:0009201!3.43e-07!17;UBERON:0004819!3.43e-07!17;UBERON:0006553!3.43e-07!17;UBERON:0003074!3.43e-07!17;UBERON:0003060!3.43e-07!17;UBERON:0001135!5.50e-07!15;UBERON:0002049!8.49e-07!79;UBERON:0007798!8.49e-07!79;UBERON:0000019!9.81e-07!19;UBERON:0000047!9.81e-07!19;UBERON:0004088!9.81e-07!19;UBERON:0003072!9.81e-07!19;UBERON:0003071!9.81e-07!19;UBERON:0004128!9.81e-07!19|ontology_enrichment_uberon_v019=UBERON:0004211;1.97e-16;10!UBERON:0009773;1.97e-16;10!UBERON:0001231;1.97e-16;10!UBERON:0004810;1.97e-16;10!UBERON:0006555;2.55e-14;15!UBERON:0004819;2.55e-14;15!UBERON:0001285;2.55e-14;15!UBERON:0007684;2.55e-14;15!UBERON:0007625;3.00e-14;11!UBERON:0006554;1.32e-11;30!UBERON:0001008;1.32e-11;30!UBERON:0001225;2.30e-10;12!UBERON:0008987;2.30e-10;12!UBERON:0002113;2.51e-10;24!UBERON:0011143;2.51e-10;24!UBERON:0000019;1.24e-08;19!UBERON:0000047;1.24e-08;19!UBERON:0004088;1.24e-08;19!UBERON:0010230;1.24e-08;19!UBERON:0001801;1.74e-08;14!UBERON:0010371;1.88e-08;31!UBERON:0000970;4.64e-08;20!UBERON:0000489;6.72e-08;29!UBERON:0001851;7.52e-08;15!UBERON:0000353;7.52e-08;15!UBERON:0000488;1.06e-07;4!UBERON:0002104;1.52e-07;21!UBERON:0001456;1.52e-07;21!UBERON:0010077;2.88e-07;4!UBERON:0005389;2.88e-07;4!UBERON:0000484;2.88e-07;4!UBERON:0000965;2.88e-07;4!UBERON:0001803;2.88e-07;4!UBERON:0003914;7.51e-07;74!UBERON:0001310;7.68e-07;4!UBERON:0000483;7.98e-07;136!UBERON:0004573;8.95e-07;33!UBERON:0004571;8.95e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0004810,2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENST00000473756_5end | |||
|coexpression_cluster_id=C1081 | |||
|description=CAGE_peak_3_at_ENST00000473756_5end | |||
|id=chr3:98699909..98699935,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.12e-16!246;CL:0000548!3.10e-16!679;CL:0000004!3.10e-16!679;CL:0000255!3.10e-16!679;CL:0002321!5.41e-16!248;CL:0000012!7.63e-16!682;CL:0000680!1.46e-14!57;CL:0000056!1.46e-14!57;CL:0000355!1.46e-14!57;CL:0000187!4.42e-14!54;CL:0000183!6.43e-14!59;CL:0000192!3.67e-13!42;CL:0000514!3.67e-13!42;CL:0000359!5.02e-13!32;CL:0002371!1.25e-12!591;CL:0000393!5.22e-12!60;CL:0000211!5.22e-12!60;CL:0000144!5.53e-12!625;CL:0000003!7.85e-12!722;CL:0000055!2.58e-11!180;CL:0000066!1.67e-10!254;CL:1000497!4.24e-09!18;CL:0002518!4.24e-09!18;CL:0000222!5.47e-09!119;CL:1000507!3.16e-08!12;CL:1000494!3.16e-08!12;CL:1000449!6.64e-08!16;CL:0002539!7.82e-08!10 | |||
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|ontology_enrichment_development_v019=CL:0000514;4.06e-10;43 | |||
|ontology_enrichment_disease=DOID:120!3.69e-09!27;DOID:193!4.50e-08!29;DOID:2394!1.47e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:120;2.16e-07;27!DOID:0060072;3.30e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:120,2.80e-07,27;DOID:0060072,3.37e-07,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;1.97e-16;10!UBERON:0009773;1.97e-16;10!UBERON:0001231;1.97e-16;10!UBERON:0004810;1.97e-16;10!UBERON:0006555;2.55e-14;15!UBERON:0004819;2.55e-14;15!UBERON:0001285;2.55e-14;15!UBERON:0007684;2.55e-14;15!UBERON:0007625;3.00e-14;11!UBERON:0006554;1.32e-11;30!UBERON:0001008;1.32e-11;30!UBERON:0001225;2.30e-10;12!UBERON:0008987;2.30e-10;12!UBERON:0002113;2.51e-10;24!UBERON:0011143;2.51e-10;24!UBERON:0000019;1.24e-08;19!UBERON:0000047;1.24e-08;19!UBERON:0004088;1.24e-08;19!UBERON:0010230;1.24e-08;19!UBERON:0001801;1.74e-08;14!UBERON:0010371;1.88e-08;31!UBERON:0000970;4.64e-08;20!UBERON:0000489;6.72e-08;29!UBERON:0001851;7.52e-08;15!UBERON:0000353;7.52e-08;15!UBERON:0000488;1.06e-07;4!UBERON:0002104;1.52e-07;21!UBERON:0001456;1.52e-07;21!UBERON:0010077;2.88e-07;4!UBERON:0005389;2.88e-07;4!UBERON:0000484;2.88e-07;4!UBERON:0000965;2.88e-07;4!UBERON:0001803;2.88e-07;4!UBERON:0003914;7.51e-07;74!UBERON:0001310;7.68e-07;4!UBERON:0000483;7.98e-07;136!UBERON:0004573;8.95e-07;33!UBERON:0004571;8.95e-07;33 | |||
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| |||
|short_description=p3@ENST00000473756 | |||
}} |
Revision as of 01:41, 13 September 2013
Short description: | p3@ENST00000473756 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENST00000473756_5end |
Coexpression cluster: | C1081_papillotubular_Renal_Mast_giant_meningioma_mucinous_gall |
Association with transcript: | 7bp_to_ENST00000473756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.35e-16 | 10 |
nephron tubule epithelial cell | 2.35e-16 | 10 |
kidney cell | 2.96e-16 | 17 |
kidney epithelial cell | 2.96e-16 | 17 |
epithelial cell of nephron | 2.98e-14 | 15 |
vascular associated smooth muscle cell | 1.29e-13 | 32 |
epithelial cell | 2.05e-13 | 253 |
smooth muscle cell | 3.71e-12 | 43 |
smooth muscle myoblast | 3.71e-12 | 43 |
kidney cortical cell | 2.65e-10 | 12 |
renal cortical epithelial cell | 2.65e-10 | 12 |
muscle precursor cell | 2.82e-09 | 58 |
myoblast | 2.82e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.82e-09 | 58 |
muscle cell | 3.60e-09 | 55 |
embryonic cell | 4.92e-08 | 250 |
electrically responsive cell | 1.13e-07 | 61 |
electrically active cell | 1.13e-07 | 61 |
crystallin accumulating cell | 2.11e-07 | 4 |
vertebrate lens cell | 2.11e-07 | 4 |
lens epithelial cell | 2.11e-07 | 4 |
smooth muscle cell of the umbilical artery | 8.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 2.80e-07 | 27 |
benign neoplasm | 3.37e-07 | 4 |
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