FFCP PHASE1:Mm9::chr14:40286744..40286796,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18183|HGNC=|MCL_coexpression_id=1|UniProt=O35181,E9Q396,B9EHF8,B7ZN23|association_with_transcript=-368bp_to_ENSMUST00000166968,NM_001190187,NM_001190188,NM_008734,uc007tbz.2,uc007tca.1,uc011zjc.1,uc011zjd.1_5end|description=CAGE_peak_2_at_Nrg3_5end|id=chr14:40286744..40286796,-|ontology_enrichment_celltype=CL:0000540!2.82e-19!33;CL:0000047!2.82e-19!33;CL:0000031!2.82e-19!33;CL:0000404!2.82e-19!33;CL:0000117!1.10e-14!23;CL:0000337!1.10e-14!23;CL:0000393!4.61e-14!39;CL:0000211!4.61e-14!39;CL:0000221!7.81e-14!44;CL:0000133!7.81e-14!44;CL:0002319!1.90e-13!43;CL:0000055!1.24e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,9.49e-24,33;CL:0000047,9.49e-24,33;CL:0000031,9.49e-24,33;CL:0000404,9.49e-24,33;CL:0000117,7.17e-19,23;CL:0000337,7.17e-19,23;CL:0000393,2.30e-18,39;CL:0000211,2.30e-18,39;CL:0000221,3.81e-16,44;CL:0000133,3.81e-16,44;CL:0002319,1.20e-15,43;CL:0000107,5.00e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.82e-31!75;UBERON:0001016!2.82e-31!75;UBERON:0001017!3.29e-31!73;UBERON:0005743!3.29e-31!73;UBERON:0004121!3.52e-30!102;UBERON:0000924!3.52e-30!102;UBERON:0006601!3.52e-30!102;UBERON:0002346!5.41e-29!71;UBERON:0003075!5.41e-29!71;UBERON:0007284!5.41e-29!71;UBERON:0000033!9.14e-26!63;UBERON:0001049!8.43e-24!52;UBERON:0005068!8.43e-24!52;UBERON:0006241!8.43e-24!52;UBERON:0007135!8.43e-24!52;UBERON:0000955!9.14e-23!50;UBERON:0006238!9.14e-23!50;UBERON:0002616!4.83e-22!49;UBERON:0003056!2.62e-21!49;UBERON:0002020!3.95e-20!34;UBERON:0003080!1.70e-17!40;UBERON:0002791!7.16e-17!29;UBERON:0003528!7.16e-17!29;UBERON:0001893!7.16e-17!29;UBERON:0002780!1.02e-16!39;UBERON:0001890!1.02e-16!39;UBERON:0006240!1.02e-16!39;UBERON:0007811!1.05e-12!86;UBERON:0000956!5.55e-12!21;UBERON:0001869!5.55e-12!21;UBERON:0000203!5.55e-12!21;UBERON:0000153!6.78e-10!94;UBERON:0002619!7.07e-10!17;UBERON:0002021!7.49e-10!10;UBERON:0000411!7.49e-10!10;UBERON:0001950!7.49e-10!10;UBERON:0003076!6.21e-07!12;UBERON:0003057!6.21e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.03e-36,73;UBERON:0001016,9.85e-35,75;UBERON:0004121,9.00e-34,95;UBERON:0000924,9.00e-34,95;UBERON:0006601,9.00e-34,95;UBERON:0002346,3.77e-33,64;UBERON:0003075,3.77e-33,64;UBERON:0007284,3.77e-33,64;UBERON:0000073,9.92e-29,54;UBERON:0010371,5.42e-28,73;UBERON:0001049,1.25e-26,52;UBERON:0005068,1.25e-26,52;UBERON:0006241,1.25e-26,52;UBERON:0007135,1.25e-26,52;UBERON:0002020,1.31e-26,34;UBERON:0003056,3.15e-23,49;UBERON:0000955,2.41e-22,47;UBERON:0006238,2.41e-22,47;UBERON:0003528,2.72e-22,29;UBERON:0002791,2.72e-22,29;UBERON:0001893,2.72e-22,29;UBERON:0002616,1.85e-21,46;UBERON:0010314,3.94e-20,92;UBERON:0003080,3.93e-19,40;UBERON:0002780,3.69e-18,39;UBERON:0001890,3.69e-18,39;UBERON:0006240,3.69e-18,39;UBERON:0000956,8.15e-16,21;UBERON:0001869,8.15e-16,21;UBERON:0000203,8.15e-16,21;UBERON:0002619,4.91e-13,17;UBERON:0002021,1.71e-12,10;UBERON:0000411,1.71e-12,10;UBERON:0001950,1.71e-12,10;UBERON:0003076,5.05e-08,12;UBERON:0003057,5.05e-08,12;UBERON:0002420,1.28e-07,8;UBERON:0007245,1.28e-07,8;UBERON:0010009,1.28e-07,8;UBERON:0010011,1.28e-07,8;UBERON:0000454,1.28e-07,8;UBERON:0002410,5.00e-07,9|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,7.48570905180512,8.46385566835253,6.97214543856797,0,0,0,0,0,0,0,3.21437798156281,2.56511282830212,1.68259969081106,7.42692559449889,5.30084498283872,2.32732518508413,1.15014565221884,5.51531271966013,18.7196997698961,20.1745994174597,19.5080297235429,4.74790635828698,4.7573574673253,3.12548022334056,12.2840519560608,16.8828783009504,13.7518422999129,10.0173719061047,7.83044244395066,7.08317894136142,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.983110940922263,0,0,0,1.69012103732017,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.173485326766136,0,0.691846491768175,0,1.41106448562846,0.502666365318702,0,0,0,0,0,0,0,24.3008061519584,35.3964934514739,0.255457055208591,0,0,0,26.6627338140584,13.2675174817402,2.01046963380583,33.2004451567248,30.4301394223093,16.2074674756457,16.5486088329113,0.101839363850316,0,0,2.10441855886474,0.260240885925407,1.60931473103431,1.0803727788321,2.10986744970001,3.40182495756639,2.8185018462667,1.78033276663485,5.17406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9775451135921,3.2929475961371,0,0,0.213288250535234,0,0.38660238396628,0.80673409849337,0,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0.456994050438915,1.1270773567308,0.203651327845314,0,0.49095073923223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4633178485961,16.8784828692773,0,0,1.26203287766503,3.51394869866975,4.52389135238878,1.19484398976276,3.11918143715352,2.26461224631066,5.66734982344852,8.47541987942804,7.51046778098395,12.8528526568723,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.36175842301515,0,0.129358683782755,0.214337035031592,0,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0.492422699235184,0,16.1320012749143,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.87345025498471,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,36.1441179274923,34.5243927380383,37.2382083735608,26.1216837162405,50.6961064630275,38.5250887668747,43.2014400148356,49.5353323546642,47.5799529433415,51.2582708634302,0,1.99512436700516,1.19513524027894,1.21553358534147,1.04806581313991,0.367687016900028,1.55572709461131,1.44224540067226,2.88827288632634,1.76888048234658,2.02783439912192,3.01802146217722,1.591905626988,1.79270426733634,1.37845125493472,1.42888107384922,1.62238056322798,1.54327376370964,0.824171801606613,1.76638704161277,1.71434626192708,0.887379030796687,1.90748951957857,1.45346416632329,2.07040636913727,1.26921911837515,1.82927972872773,2.10455769150274,0.950628796921032,1.12228454331548,1.42362021749009,1.47756723563345,1.22769312950907,0.929621047115796,1.15743966588685,1.99848462350357,0.233931608445408,1.93383948643468,0.956441660344217,0.441182838239031,0.231867835620421|short_description=p2@Nrg3}} | ||
|EntrezGene=18183 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=O35181,E9Q396,B9EHF8,B7ZN23 | |||
|association_with_transcript=-368bp_to_ENSMUST00000166968,NM_001190187,NM_001190188,NM_008734,uc007tbz.2,uc007tca.1,uc011zjc.1,uc011zjd.1_5end | |||
|description=CAGE_peak_2_at_Nrg3_5end | |||
|id=chr14:40286744..40286796,- | |||
|ontology_enrichment_celltype=CL:0000540!2.82e-19!33;CL:0000047!2.82e-19!33;CL:0000031!2.82e-19!33;CL:0000404!2.82e-19!33;CL:0000117!1.10e-14!23;CL:0000337!1.10e-14!23;CL:0000393!4.61e-14!39;CL:0000211!4.61e-14!39;CL:0000221!7.81e-14!44;CL:0000133!7.81e-14!44;CL:0002319!1.90e-13!43;CL:0000055!1.24e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.49e-24,33;CL:0000047,9.49e-24,33;CL:0000031,9.49e-24,33;CL:0000404,9.49e-24,33;CL:0000117,7.17e-19,23;CL:0000337,7.17e-19,23;CL:0000393,2.30e-18,39;CL:0000211,2.30e-18,39;CL:0000221,3.81e-16,44;CL:0000133,3.81e-16,44;CL:0002319,1.20e-15,43;CL:0000107,5.00e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.82e-31!75;UBERON:0001016!2.82e-31!75;UBERON:0001017!3.29e-31!73;UBERON:0005743!3.29e-31!73;UBERON:0004121!3.52e-30!102;UBERON:0000924!3.52e-30!102;UBERON:0006601!3.52e-30!102;UBERON:0002346!5.41e-29!71;UBERON:0003075!5.41e-29!71;UBERON:0007284!5.41e-29!71;UBERON:0000033!9.14e-26!63;UBERON:0001049!8.43e-24!52;UBERON:0005068!8.43e-24!52;UBERON:0006241!8.43e-24!52;UBERON:0007135!8.43e-24!52;UBERON:0000955!9.14e-23!50;UBERON:0006238!9.14e-23!50;UBERON:0002616!4.83e-22!49;UBERON:0003056!2.62e-21!49;UBERON:0002020!3.95e-20!34;UBERON:0003080!1.70e-17!40;UBERON:0002791!7.16e-17!29;UBERON:0003528!7.16e-17!29;UBERON:0001893!7.16e-17!29;UBERON:0002780!1.02e-16!39;UBERON:0001890!1.02e-16!39;UBERON:0006240!1.02e-16!39;UBERON:0007811!1.05e-12!86;UBERON:0000956!5.55e-12!21;UBERON:0001869!5.55e-12!21;UBERON:0000203!5.55e-12!21;UBERON:0000153!6.78e-10!94;UBERON:0002619!7.07e-10!17;UBERON:0002021!7.49e-10!10;UBERON:0000411!7.49e-10!10;UBERON:0001950!7.49e-10!10;UBERON:0003076!6.21e-07!12;UBERON:0003057!6.21e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.03e-36,73;UBERON:0001016,9.85e-35,75;UBERON:0004121,9.00e-34,95;UBERON:0000924,9.00e-34,95;UBERON:0006601,9.00e-34,95;UBERON:0002346,3.77e-33,64;UBERON:0003075,3.77e-33,64;UBERON:0007284,3.77e-33,64;UBERON:0000073,9.92e-29,54;UBERON:0010371,5.42e-28,73;UBERON:0001049,1.25e-26,52;UBERON:0005068,1.25e-26,52;UBERON:0006241,1.25e-26,52;UBERON:0007135,1.25e-26,52;UBERON:0002020,1.31e-26,34;UBERON:0003056,3.15e-23,49;UBERON:0000955,2.41e-22,47;UBERON:0006238,2.41e-22,47;UBERON:0003528,2.72e-22,29;UBERON:0002791,2.72e-22,29;UBERON:0001893,2.72e-22,29;UBERON:0002616,1.85e-21,46;UBERON:0010314,3.94e-20,92;UBERON:0003080,3.93e-19,40;UBERON:0002780,3.69e-18,39;UBERON:0001890,3.69e-18,39;UBERON:0006240,3.69e-18,39;UBERON:0000956,8.15e-16,21;UBERON:0001869,8.15e-16,21;UBERON:0000203,8.15e-16,21;UBERON:0002619,4.91e-13,17;UBERON:0002021,1.71e-12,10;UBERON:0000411,1.71e-12,10;UBERON:0001950,1.71e-12,10;UBERON:0003076,5.05e-08,12;UBERON:0003057,5.05e-08,12;UBERON:0002420,1.28e-07,8;UBERON:0007245,1.28e-07,8;UBERON:0010009,1.28e-07,8;UBERON:0010011,1.28e-07,8;UBERON:0000454,1.28e-07,8;UBERON:0002410,5.00e-07,9 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,7.48570905180512,8.46385566835253,6.97214543856797,0,0,0,0,0,0,0,3.21437798156281,2.56511282830212,1.68259969081106,7.42692559449889,5.30084498283872,2.32732518508413,1.15014565221884,5.51531271966013,18.7196997698961,20.1745994174597,19.5080297235429,4.74790635828698,4.7573574673253,3.12548022334056,12.2840519560608,16.8828783009504,13.7518422999129,10.0173719061047,7.83044244395066,7.08317894136142,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.983110940922263,0,0,0,1.69012103732017,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.173485326766136,0,0.691846491768175,0,1.41106448562846,0.502666365318702,0,0,0,0,0,0,0,24.3008061519584,35.3964934514739,0.255457055208591,0,0,0,26.6627338140584,13.2675174817402,2.01046963380583,33.2004451567248,30.4301394223093,16.2074674756457,16.5486088329113,0.101839363850316,0,0,2.10441855886474,0.260240885925407,1.60931473103431,1.0803727788321,2.10986744970001,3.40182495756639,2.8185018462667,1.78033276663485,5.17406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9775451135921,3.2929475961371,0,0,0.213288250535234,0,0.38660238396628,0.80673409849337,0,0.380451252225118,0,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0.456994050438915,1.1270773567308,0.203651327845314,0,0.49095073923223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4633178485961,16.8784828692773,0,0,1.26203287766503,3.51394869866975,4.52389135238878,1.19484398976276,3.11918143715352,2.26461224631066,5.66734982344852,8.47541987942804,7.51046778098395,12.8528526568723,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.36175842301515,0,0.129358683782755,0.214337035031592,0,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0.492422699235184,0,16.1320012749143,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.87345025498471,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,36.1441179274923,34.5243927380383,37.2382083735608,26.1216837162405,50.6961064630275,38.5250887668747,43.2014400148356,49.5353323546642,47.5799529433415,51.2582708634302,0,1.99512436700516,1.19513524027894,1.21553358534147,1.04806581313991,0.367687016900028,1.55572709461131,1.44224540067226,2.88827288632634,1.76888048234658,2.02783439912192,3.01802146217722,1.591905626988,1.79270426733634,1.37845125493472,1.42888107384922,1.62238056322798,1.54327376370964,0.824171801606613,1.76638704161277,1.71434626192708,0.887379030796687,1.90748951957857,1.45346416632329,2.07040636913727,1.26921911837515,1.82927972872773,2.10455769150274,0.950628796921032,1.12228454331548,1.42362021749009,1.47756723563345,1.22769312950907,0.929621047115796,1.15743966588685,1.99848462350357,0.233931608445408,1.93383948643468,0.956441660344217,0.441182838239031,0.231867835620421 | |||
|short_description=p2@Nrg3 | |||
}} |
Revision as of 02:06, 13 September 2013
Short description: | p2@Nrg3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nrg3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -368bp_to_ENSMUST00000166968, NM_001190187, NM_001190188, NM_008734, uc007tbz.2, uc007tca.1, uc011zjc.1, uc011zjd.1_5end |
EntrezGene: | Nrg3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.49e-24 | 33 |
neuronal stem cell | 9.49e-24 | 33 |
neuroblast | 9.49e-24 | 33 |
electrically signaling cell | 9.49e-24 | 33 |
CNS neuron (sensu Vertebrata) | 7.17e-19 | 23 |
neuroblast (sensu Vertebrata) | 7.17e-19 | 23 |
electrically responsive cell | 2.30e-18 | 39 |
electrically active cell | 2.30e-18 | 39 |
ectodermal cell | 3.81e-16 | 44 |
neurectodermal cell | 3.81e-16 | 44 |
neural cell | 1.20e-15 | 43 |
autonomic neuron | 5.00e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.