FFCP PHASE1:Hg19::chr5:131826457..131826514,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6116 | |||
|TSSclassifier=S | |||
|UniProt=P10914,C9J9C5,Q6FHN8 | |||
|association_with_transcript=0bp_to_ENST00000245414,ENST00000437654,ENST00000459982,ENST00000463784,NM_002198,uc003kxa.2,uc003kxd.2_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_IRF1_5end | |||
|id=chr5:131826457..131826514,- | |||
|ontology_enrichment_celltype=CL:0000738!3.54e-46!140;CL:0000988!4.40e-39!182;CL:0002031!5.43e-38!124;CL:0000037!1.30e-37!172;CL:0000566!1.30e-37!172;CL:0002087!2.00e-36!119;CL:0002032!1.88e-34!165;CL:0000837!1.88e-34!165;CL:0002057!2.56e-24!42;CL:0000766!7.94e-24!76;CL:0000860!1.88e-21!45;CL:0000557!2.01e-20!71;CL:0000839!1.37e-19!70;CL:0002009!2.16e-18!65;CL:0002194!1.56e-17!63;CL:0000576!1.56e-17!63;CL:0000040!1.56e-17!63;CL:0000559!1.56e-17!63;CL:0000763!2.31e-17!112;CL:0000049!2.31e-17!112;CL:0000838!8.03e-17!52;CL:0000542!8.49e-17!53;CL:0000051!8.49e-17!53;CL:0000134!8.82e-15!358;CL:0002320!1.33e-14!365;CL:0000048!7.53e-11!430;CL:0000084!2.35e-10!25;CL:0000827!2.35e-10!25;CL:0000791!7.96e-10!18;CL:0000789!7.96e-10!18;CL:0002420!7.96e-10!18;CL:0002419!7.96e-10!18;CL:0000790!7.96e-10!18;CL:0000723!1.61e-09!436;CL:0000034!7.98e-09!444;CL:0000219!4.21e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-17;33!CL:0002057;1.76e-17;33!CL:0000576;1.37e-14;48!CL:0000473;5.52e-14;39!CL:0000234;5.52e-14;39!CL:0000766;8.25e-13;69!CL:0002087;1.87e-12;104!CL:0000738;1.91e-10;136!CL:0000084;2.36e-10;25!CL:0000542;4.61e-10;53!CL:0000791;7.93e-10;18!CL:0000789;7.93e-10;18!CL:0002419;7.93e-10;18!CL:0000988;2.93e-07;177 | |||
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| |||
|short_description=p1@IRF1 | |||
}} |
Revision as of 13:06, 13 September 2013
Short description: | p1@IRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IRF1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000245414, ENST00000437654, ENST00000459982, ENST00000463784, NM_002198, uc003kxa.2, uc003kxd.2_5end |
EntrezGene: | IRF1 |
HGNC: | 6116 |
UniProt: | P10914C9J9C5Q6FHN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.91e-31 | 108 |
hematopoietic system | 3.25e-29 | 98 |
blood island | 3.25e-29 | 98 |
immune system | 7.33e-24 | 93 |
bone marrow | 6.76e-20 | 76 |
bone element | 1.78e-16 | 82 |
connective tissue | 1.87e-14 | 371 |
skeletal element | 8.99e-14 | 90 |
lateral plate mesoderm | 1.85e-11 | 203 |
skeletal system | 3.10e-11 | 100 |
blood | 1.20e-08 | 15 |
haemolymphatic fluid | 1.20e-08 | 15 |
organism substance | 1.20e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.