FFCP PHASE1:Mm9::chr1:140071815..140071831,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19264|HGNC=|MCL_coexpression_id=1285|UniProt=F8WGC7|association_with_transcript=44bp_to_ENSMUST00000081416_5end|description=CAGE_peak_2_at_Ptprc_5end|id=chr1:140071815..140071831,-|ontology_enrichment_celltype=CL:0000988!1.05e-10!32;CL:0002032!1.05e-10!32;CL:0000037!1.05e-10!32;CL:0000566!1.05e-10!32;CL:0000837!1.05e-10!32;CL:0000838!9.40e-09!12;CL:0002031!1.52e-08!25;CL:0000738!1.73e-08!17;CL:0002087!1.73e-08!17;CL:0000084!4.19e-08!11;CL:0000827!4.19e-08!11;CL:0000542!4.81e-08!13;CL:0000051!4.81e-08!13;CL:0000791!3.04e-07!9;CL:0000789!3.04e-07!9;CL:0002420!3.04e-07!9;CL:0002419!3.04e-07!9;CL:0000790!3.04e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,4.78e-12,32;CL:0002032,4.78e-12,32;CL:0000037,4.78e-12,32;CL:0000837,4.78e-12,32;CL:0002031,6.10e-10,25;CL:0000838,9.89e-10,12;CL:0000084,5.39e-09,11;CL:0000827,5.39e-09,11;CL:0000738,1.50e-08,17;CL:0002087,1.50e-08,17;CL:0000542,1.75e-08,13;CL:0000051,1.75e-08,13;CL:0000791,5.10e-08,9;CL:0000789,5.10e-08,9;CL:0002420,5.10e-08,9;CL:0002419,5.10e-08,9;CL:0000790,5.10e-08,9;CL:0002320,2.21e-07,46;CL:0000134,2.21e-07,46;CL:0000624,2.43e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.03e-18!48;UBERON:0002405!3.90e-18!70;UBERON:0002390!7.89e-17!45;UBERON:0003061!7.89e-17!45;UBERON:0004177!3.51e-11!29;UBERON:0005057!7.27e-11!51;UBERON:0000926!7.67e-10!193;UBERON:0004120!7.67e-10!193;UBERON:0006603!7.67e-10!193;UBERON:0000077!1.20e-09!97;UBERON:0004119!1.51e-09!130;UBERON:0000925!1.51e-09!130;UBERON:0006595!1.51e-09!130;UBERON:0001007!1.90e-09!128;UBERON:0001555!1.90e-09!128;UBERON:0007026!1.90e-09!128;UBERON:0001041!3.87e-09!92;UBERON:0003081!6.82e-09!88;UBERON:0003408!7.20e-09!24;UBERON:0004921!8.25e-09!126;UBERON:0004185!8.25e-09!126;UBERON:0006562!1.54e-08!24;UBERON:0001557!1.54e-08!24;UBERON:0001042!1.54e-08!24;UBERON:0008814!1.54e-08!24;UBERON:0009145!1.54e-08!24;UBERON:0002370!1.78e-08!23;UBERON:0000974!1.78e-08!23;UBERON:0004807!1.78e-08!23;UBERON:0005058!1.78e-08!23;UBERON:0003351!1.78e-08!23;UBERON:0009113!1.78e-08!23;UBERON:0003295!1.78e-08!23;UBERON:0009722!1.78e-08!23;UBERON:0005562!1.78e-08!23;UBERON:0007690!1.78e-08!23;UBERON:0003104!3.16e-08!131;UBERON:0009142!3.16e-08!131;UBERON:0001004!2.40e-07!42;UBERON:0000065!5.32e-07!41;UBERON:0002530!9.01e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.20e-21,48;UBERON:0002405,3.20e-21,48;UBERON:0002390,2.10e-19,45;UBERON:0003061,2.10e-19,45;UBERON:0004177,1.92e-13,29;UBERON:0005057,1.92e-13,29;UBERON:0001007,2.74e-12,116;UBERON:0001555,2.74e-12,116;UBERON:0007026,2.74e-12,116;UBERON:0000077,3.13e-12,35;UBERON:0004119,3.51e-12,118;UBERON:0000925,3.51e-12,118;UBERON:0006595,3.51e-12,118;UBERON:0001041,1.11e-11,80;UBERON:0004921,1.68e-11,114;UBERON:0003408,8.83e-11,24;UBERON:0006562,2.19e-10,24;UBERON:0001557,2.19e-10,24;UBERON:0001042,2.19e-10,24;UBERON:0008814,2.19e-10,24;UBERON:0009145,2.19e-10,24;UBERON:0002370,2.50e-10,23;UBERON:0000974,2.50e-10,23;UBERON:0004807,2.50e-10,23;UBERON:0005058,2.50e-10,23;UBERON:0003351,2.50e-10,23;UBERON:0009113,2.50e-10,23;UBERON:0003295,2.50e-10,23;UBERON:0009722,2.50e-10,23;UBERON:0005562,2.50e-10,23;UBERON:0007690,2.50e-10,23;UBERON:0001004,5.15e-09,42;UBERON:0003081,6.22e-09,87;UBERON:0000065,1.32e-08,41;UBERON:0000072,4.13e-08,27;UBERON:0002384,2.21e-07,46;UBERON:0005911,5.81e-07,69;UBERON:0002530,7.18e-07,65;UBERON:0002371,8.81e-07,16|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,91.6775596435191,274.819585640054,285.32465758651,113.51751293351,128.911808936464,90.0515839438142,85.6719943706175,23.6507930889121,30.7762406432535,2.79824751251259,121.452933662922,126.14527891728,86.5754889667982,6.12311689087702,30.1844491650691,21.6795824985316,17.1191892388945,13.7645568640302,0,0,0,1.14014051673824,3.02436155711917,2.21730510655305,0,0,0,0,0,0,62.7797446105362,44.5361146378566,62.299325532882,137.057936711226,92.2111404693902,77.6816564849846,0,0,0,0,0,0,0,0,0,102.850737513392,67.458679207055,84.023449785616,0,0,0.515672092277442,0,0,0,0,0,6.29929802096979,8.89979726310277,3.5524005747305,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0,0,1.10115880999389,0.766124028511126,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0.372798891650601,0.757261933331841,0,0.869593466105033,1.72084775396277,0,0,1.29955283489534,0.896053774194671,8.42666520790511,0,0,0,0,0,0,0,0,0,0,11.1900202124679,397.728589282056,8.16431764856536,0.346970653532272,0,0.691846491768175,0.753613202763113,1.76383060703557,2.63899841792318,0,10.4111536982336,13.2691582792481,3.558870698843,10.1587098491781,13.5765070877862,3.72783522436244,0.292780797011547,0.628340120440365,9.19645398750929,30.1934113754919,10.7982491578813,35.1984528992389,0.449371918214468,0.457500602818626,0.251308704225729,1.39059456153821,0.255715457330331,0,0.162241263067758,0.509196819251581,12.5651040316194,1.76905930903572,2.52530227063769,0.520481771850815,0.22990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| ||
|EntrezGene=19264 | |||
|HGNC= | |||
|MCL_coexpression_id=1285 | |||
|UniProt=F8WGC7 | |||
|association_with_transcript=44bp_to_ENSMUST00000081416_5end | |||
|description=CAGE_peak_2_at_Ptprc_5end | |||
|id=chr1:140071815..140071831,- | |||
|ontology_enrichment_celltype=CL:0000988!1.05e-10!32;CL:0002032!1.05e-10!32;CL:0000037!1.05e-10!32;CL:0000566!1.05e-10!32;CL:0000837!1.05e-10!32;CL:0000838!9.40e-09!12;CL:0002031!1.52e-08!25;CL:0000738!1.73e-08!17;CL:0002087!1.73e-08!17;CL:0000084!4.19e-08!11;CL:0000827!4.19e-08!11;CL:0000542!4.81e-08!13;CL:0000051!4.81e-08!13;CL:0000791!3.04e-07!9;CL:0000789!3.04e-07!9;CL:0002420!3.04e-07!9;CL:0002419!3.04e-07!9;CL:0000790!3.04e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.78e-12,32;CL:0002032,4.78e-12,32;CL:0000037,4.78e-12,32;CL:0000837,4.78e-12,32;CL:0002031,6.10e-10,25;CL:0000838,9.89e-10,12;CL:0000084,5.39e-09,11;CL:0000827,5.39e-09,11;CL:0000738,1.50e-08,17;CL:0002087,1.50e-08,17;CL:0000542,1.75e-08,13;CL:0000051,1.75e-08,13;CL:0000791,5.10e-08,9;CL:0000789,5.10e-08,9;CL:0002420,5.10e-08,9;CL:0002419,5.10e-08,9;CL:0000790,5.10e-08,9;CL:0002320,2.21e-07,46;CL:0000134,2.21e-07,46;CL:0000624,2.43e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.03e-18!48;UBERON:0002405!3.90e-18!70;UBERON:0002390!7.89e-17!45;UBERON:0003061!7.89e-17!45;UBERON:0004177!3.51e-11!29;UBERON:0005057!7.27e-11!51;UBERON:0000926!7.67e-10!193;UBERON:0004120!7.67e-10!193;UBERON:0006603!7.67e-10!193;UBERON:0000077!1.20e-09!97;UBERON:0004119!1.51e-09!130;UBERON:0000925!1.51e-09!130;UBERON:0006595!1.51e-09!130;UBERON:0001007!1.90e-09!128;UBERON:0001555!1.90e-09!128;UBERON:0007026!1.90e-09!128;UBERON:0001041!3.87e-09!92;UBERON:0003081!6.82e-09!88;UBERON:0003408!7.20e-09!24;UBERON:0004921!8.25e-09!126;UBERON:0004185!8.25e-09!126;UBERON:0006562!1.54e-08!24;UBERON:0001557!1.54e-08!24;UBERON:0001042!1.54e-08!24;UBERON:0008814!1.54e-08!24;UBERON:0009145!1.54e-08!24;UBERON:0002370!1.78e-08!23;UBERON:0000974!1.78e-08!23;UBERON:0004807!1.78e-08!23;UBERON:0005058!1.78e-08!23;UBERON:0003351!1.78e-08!23;UBERON:0009113!1.78e-08!23;UBERON:0003295!1.78e-08!23;UBERON:0009722!1.78e-08!23;UBERON:0005562!1.78e-08!23;UBERON:0007690!1.78e-08!23;UBERON:0003104!3.16e-08!131;UBERON:0009142!3.16e-08!131;UBERON:0001004!2.40e-07!42;UBERON:0000065!5.32e-07!41;UBERON:0002530!9.01e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.20e-21,48;UBERON:0002405,3.20e-21,48;UBERON:0002390,2.10e-19,45;UBERON:0003061,2.10e-19,45;UBERON:0004177,1.92e-13,29;UBERON:0005057,1.92e-13,29;UBERON:0001007,2.74e-12,116;UBERON:0001555,2.74e-12,116;UBERON:0007026,2.74e-12,116;UBERON:0000077,3.13e-12,35;UBERON:0004119,3.51e-12,118;UBERON:0000925,3.51e-12,118;UBERON:0006595,3.51e-12,118;UBERON:0001041,1.11e-11,80;UBERON:0004921,1.68e-11,114;UBERON:0003408,8.83e-11,24;UBERON:0006562,2.19e-10,24;UBERON:0001557,2.19e-10,24;UBERON:0001042,2.19e-10,24;UBERON:0008814,2.19e-10,24;UBERON:0009145,2.19e-10,24;UBERON:0002370,2.50e-10,23;UBERON:0000974,2.50e-10,23;UBERON:0004807,2.50e-10,23;UBERON:0005058,2.50e-10,23;UBERON:0003351,2.50e-10,23;UBERON:0009113,2.50e-10,23;UBERON:0003295,2.50e-10,23;UBERON:0009722,2.50e-10,23;UBERON:0005562,2.50e-10,23;UBERON:0007690,2.50e-10,23;UBERON:0001004,5.15e-09,42;UBERON:0003081,6.22e-09,87;UBERON:0000065,1.32e-08,41;UBERON:0000072,4.13e-08,27;UBERON:0002384,2.21e-07,46;UBERON:0005911,5.81e-07,69;UBERON:0002530,7.18e-07,65;UBERON:0002371,8.81e-07,16 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,91.6775596435191,274.819585640054,285.32465758651,113.51751293351,128.911808936464,90.0515839438142,85.6719943706175,23.6507930889121,30.7762406432535,2.79824751251259,121.452933662922,126.14527891728,86.5754889667982,6.12311689087702,30.1844491650691,21.6795824985316,17.1191892388945,13.7645568640302,0,0,0,1.14014051673824,3.02436155711917,2.21730510655305,0,0,0,0,0,0,62.7797446105362,44.5361146378566,62.299325532882,137.057936711226,92.2111404693902,77.6816564849846,0,0,0,0,0,0,0,0,0,102.850737513392,67.458679207055,84.023449785616,0,0,0.515672092277442,0,0,0,0,0,6.29929802096979,8.89979726310277,3.5524005747305,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0,0,1.10115880999389,0.766124028511126,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0.372798891650601,0.757261933331841,0,0.869593466105033,1.72084775396277,0,0,1.29955283489534,0.896053774194671,8.42666520790511,0,0,0,0,0,0,0,0,0,0,11.1900202124679,397.728589282056,8.16431764856536,0.346970653532272,0,0.691846491768175,0.753613202763113,1.76383060703557,2.63899841792318,0,10.4111536982336,13.2691582792481,3.558870698843,10.1587098491781,13.5765070877862,3.72783522436244,0.292780797011547,0.628340120440365,9.19645398750929,30.1934113754919,10.7982491578813,35.1984528992389,0.449371918214468,0.457500602818626,0.251308704225729,1.39059456153821,0.255715457330331,0,0.162241263067758,0.509196819251581,12.5651040316194,1.76905930903572,2.52530227063769,0.520481771850815,0.229902104433473,0,0.150704817835715,0.136072998302656,0.2562274405697,0.374806898238915,1.03481348295606,0,0.189106080167819,0,0.219195732427575,0.834141747676794,0.348252166522167,1.4404749548556,0.199034266818493,15.4486901208912,20.0731367549478,29.268840437746,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0.393528463494808,0.308534225774757,0,0.536546802799238,1.16765342367169,0.658239399653922,1.31333971263276,1.21603214318784,2.92399974850665,7.90380415047782,3.75777972529041,0.210289948564127,0.411618449517138,8.26046957459495,6.08236303326152,0.639864751605702,0.232236671860439,0.77320476793256,2.01683524623343,1.77902435075896,2.28270751335071,7.11793592316767,1.81168850196412,3.51869292320377,4.57599885694647,6.43381487493096,7.19055526923377,9.29393614461185,6.37252074413975,0.189667900953082,0.685491075658373,0,0.814605311381257,0.775809948670503,0.841629838683823,1.13825766823663,2.50937251565324,3.767969468193,2.22114895059241,6.52195779591728,1.16791574001266,1.17935397067922,1.57403478669398,2.02860121388503,2.17059443777175,2.80088436959562,4.31544206176216,3.56697498905078,4.11842119782122,7.18841032636773,6.69853705803306,11.2333562321242,6.31447194867779,5.38192240565737,5.30687873499704,37.5048976038208,0.189491411770485,0.162964976442026,0.169745085775188,0.938760993154008,2.51259386162724,1.90434912708811,2.34160377429359,9.14283835815908,7.52979944805835,8.77001227616179,17.2056480451525,23.13978757003,13.5970115066621,88.9668575241706,126.186118645941,9.83528546038072,13.2449638226272,1.28440471990234,0.820481806145422,0,3.02965112645248,0,0,0,0,0,0,0,0,0,0.642642632843614,5.10984306749767,0.178065603667255,0.162886959353576,11.8778488540226,2.65490276679926,0,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,2.58428293168221,2.90826983582004,0.712994756769443,2.84433082142234,6.32511651449993,0,3.74483566329167,0.540183282093931,0.129358683782755,0,0.532020700926821,0.356737635204141,0.493647061806363,0.608929898229199,5.16277757740163,0.63549621259146,1.54369878638473,5.7710188529518,1.13025098687134,1.26657142349127,1.07435109602823,2.9545361954111,8.74442509889552,2.59595422814714,72.7909952198852,7.22354037871279,18.3342582096015,20.3437933565066,49.8933931181742,57.6520996480437,14.6181449794716,19.5932033253121,18.2423965421839,3.81868247206045,0.632671987162271,1.21991680276109,0.540026704109006,1.25452977608681,1.74690050996942,0.674321731924103,2.14898984885873,3.40282724579238,4.27729411862916,15.5334828271731,0.56369293868419,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.704143431874524,0.781226309063701,0.104859344425711,0,0.576060012515731,71.7345243825965,4.45995473638361,9.34669710199928,18.9684401547581,23.6315238281076,39.3389082466905,44.1117299738286,46.2268220056427,64.9214273166589,47.8578745793399,57.5717517131359,76.2120627384864,78.7012864617895,83.0994774510955,2.94749498699775,0,0,0,4.25017106870819,12.5747258552292,8.97442958909599,5.57357785605571,4.01257683228291,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0,0,0.512200817262403,1.70174701947806,0.209613162627982,0.735374033800057,0.888986911206461,0.824140228955577,1.28367683836726,2.02157769411038,1.2673964994512,0.377252682772152,1.12369808963859,1.40855335290712,1.49332219284595,2.38146845641537,1.0429589335037,1.54327376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| |||
|short_description=p2@Ptprc | |||
}} |
Revision as of 19:08, 13 September 2013
Short description: | p2@Ptprc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptprc_5end |
Coexpression cluster: | MCL_coexpression_mm9:1285 |
Association with transcript: | 44bp_to_ENSMUST00000081416_5end |
EntrezGene: | Ptprc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.78e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.78e-12 | 32 |
hematopoietic stem cell | 4.78e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.78e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 6.10e-10 | 25 |
lymphoid lineage restricted progenitor cell | 9.89e-10 | 12 |
T cell | 5.39e-09 | 11 |
pro-T cell | 5.39e-09 | 11 |
leukocyte | 1.50e-08 | 17 |
nongranular leukocyte | 1.50e-08 | 17 |
lymphocyte | 1.75e-08 | 13 |
common lymphoid progenitor | 1.75e-08 | 13 |
mature alpha-beta T cell | 5.10e-08 | 9 |
alpha-beta T cell | 5.10e-08 | 9 |
immature T cell | 5.10e-08 | 9 |
mature T cell | 5.10e-08 | 9 |
immature alpha-beta T cell | 5.10e-08 | 9 |
connective tissue cell | 2.21e-07 | 46 |
mesenchymal cell | 2.21e-07 | 46 |
CD4-positive, alpha-beta T cell | 2.43e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.