FFCP PHASE1:Mm9::chr1:162282122..162282136,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=29809|HGNC=|MCL_coexpression_id=13|UniProt=A6H6A9|association_with_transcript=-420bp_to_ENSMUST00000028052,NM_001038621,uc007deh.1_5end|description=CAGE_peak_9_at_Rabgap1l_5end|id=chr1:162282122..162282136,-|ontology_enrichment_celltype=CL:0000117!5.50e-17!23;CL:0000337!5.50e-17!23;CL:0000540!1.02e-12!33;CL:0000047!1.02e-12!33;CL:0000031!1.02e-12!33;CL:0000404!1.02e-12!33;CL:0000393!1.98e-10!39;CL:0000211!1.98e-10!39;CL:0000221!3.98e-09!44;CL:0000133!3.98e-09!44;CL:0002319!1.11e-08!43;CL:0000055!5.04e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-23,23;CL:0000337,1.22e-23,23;CL:0000540,1.64e-14,33;CL:0000047,1.64e-14,33;CL:0000031,1.64e-14,33;CL:0000404,1.64e-14,33;CL:0000393,2.48e-11,39;CL:0000211,2.48e-11,39;CL:0000221,2.24e-10,44;CL:0000133,2.24e-10,44;CL:0002319,1.01e-09,43;CL:0002609,6.44e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.38e-23!34;UBERON:0001049!1.72e-21!52;UBERON:0005068!1.72e-21!52;UBERON:0006241!1.72e-21!52;UBERON:0007135!1.72e-21!52;UBERON:0001017!2.46e-21!73;UBERON:0005743!2.46e-21!73;UBERON:0000073!6.52e-21!75;UBERON:0001016!6.52e-21!75;UBERON:0002346!1.21e-20!71;UBERON:0003075!1.21e-20!71;UBERON:0007284!1.21e-20!71;UBERON:0000955!5.06e-20!50;UBERON:0006238!5.06e-20!50;UBERON:0002616!2.85e-19!49;UBERON:0002791!3.95e-19!29;UBERON:0003528!3.95e-19!29;UBERON:0001893!3.95e-19!29;UBERON:0000033!6.65e-19!63;UBERON:0003080!7.84e-18!40;UBERON:0004121!1.27e-17!102;UBERON:0000924!1.27e-17!102;UBERON:0006601!1.27e-17!102;UBERON:0002780!3.93e-17!39;UBERON:0001890!3.93e-17!39;UBERON:0006240!3.93e-17!39;UBERON:0003056!8.70e-17!49;UBERON:0000956!3.96e-14!21;UBERON:0001869!3.96e-14!21;UBERON:0000203!3.96e-14!21;UBERON:0002619!1.07e-10!17;UBERON:0007811!6.61e-10!86;UBERON:0002021!1.56e-09!10;UBERON:0000411!1.56e-09!10;UBERON:0001950!1.56e-09!10;UBERON:0000153!1.42e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.29e-34,34;UBERON:0000073,1.13e-31,54;UBERON:0003528,5.60e-30,29;UBERON:0002791,5.60e-30,29;UBERON:0001893,5.60e-30,29;UBERON:0001049,1.92e-29,52;UBERON:0005068,1.92e-29,52;UBERON:0006241,1.92e-29,52;UBERON:0007135,1.92e-29,52;UBERON:0001017,3.68e-28,73;UBERON:0001016,4.58e-27,75;UBERON:0000955,4.85e-25,47;UBERON:0006238,4.85e-25,47;UBERON:0003080,5.52e-25,40;UBERON:0002616,7.14e-24,46;UBERON:0002780,7.41e-24,39;UBERON:0001890,7.41e-24,39;UBERON:0006240,7.41e-24,39;UBERON:0002346,7.95e-22,64;UBERON:0003075,7.95e-22,64;UBERON:0007284,7.95e-22,64;UBERON:0000956,1.28e-21,21;UBERON:0001869,1.28e-21,21;UBERON:0000203,1.28e-21,21;UBERON:0004121,9.27e-20,95;UBERON:0000924,9.27e-20,95;UBERON:0006601,9.27e-20,95;UBERON:0010371,6.12e-19,73;UBERON:0003056,1.02e-18,49;UBERON:0002619,6.20e-16,17;UBERON:0002021,7.24e-15,10;UBERON:0000411,7.24e-15,10;UBERON:0001950,7.24e-15,10;UBERON:0010314,8.79e-13,92;UBERON:0002420,2.56e-09,8;UBERON:0007245,2.56e-09,8;UBERON:0010009,2.56e-09,8;UBERON:0010011,2.56e-09,8;UBERON:0000454,2.56e-09,8;UBERON:0000025,1.02e-07,114;UBERON:0004111,3.74e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,2.53532561402472,0,0,0,0.988866362566974,0,0,0,7.67303131082735,6.48028503992115,4.83747411108179,2.85650984403804,0.441737081903227,2.81728838194394,0.670918297127655,3.67687514644008,3.30347642998166,1.65993539510744,2.61131106535614,2.1101806036831,1.9212405156506,1.56274011167028,1.3959149950069,2.8138130501584,1.5279824777681,5.00868595305235,5.69486723196412,3.16879057903011,0,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.913396434936424,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,2.54644086988199,2.28750301409313,1.88481528169297,3.82413504423008,3.83573185995496,3.1168206683934,1.78465389374533,0.611036183101898,0,0,0,0.130120442962704,0,0.360124259610698,0.150704817835715,0.136072998302656,0.512454881139399,0,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,8.62188789112922,4.01327988279209,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.69586879162067,0,0,0,0.390438744296638,0.861693590931196,0,0,0,0,0.584511715822624,0,2.89189184779626,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0.20331946712684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| ||
|EntrezGene=29809 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=A6H6A9 | |||
|association_with_transcript=-420bp_to_ENSMUST00000028052,NM_001038621,uc007deh.1_5end | |||
|description=CAGE_peak_9_at_Rabgap1l_5end | |||
|id=chr1:162282122..162282136,- | |||
|ontology_enrichment_celltype=CL:0000117!5.50e-17!23;CL:0000337!5.50e-17!23;CL:0000540!1.02e-12!33;CL:0000047!1.02e-12!33;CL:0000031!1.02e-12!33;CL:0000404!1.02e-12!33;CL:0000393!1.98e-10!39;CL:0000211!1.98e-10!39;CL:0000221!3.98e-09!44;CL:0000133!3.98e-09!44;CL:0002319!1.11e-08!43;CL:0000055!5.04e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-23,23;CL:0000337,1.22e-23,23;CL:0000540,1.64e-14,33;CL:0000047,1.64e-14,33;CL:0000031,1.64e-14,33;CL:0000404,1.64e-14,33;CL:0000393,2.48e-11,39;CL:0000211,2.48e-11,39;CL:0000221,2.24e-10,44;CL:0000133,2.24e-10,44;CL:0002319,1.01e-09,43;CL:0002609,6.44e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.38e-23!34;UBERON:0001049!1.72e-21!52;UBERON:0005068!1.72e-21!52;UBERON:0006241!1.72e-21!52;UBERON:0007135!1.72e-21!52;UBERON:0001017!2.46e-21!73;UBERON:0005743!2.46e-21!73;UBERON:0000073!6.52e-21!75;UBERON:0001016!6.52e-21!75;UBERON:0002346!1.21e-20!71;UBERON:0003075!1.21e-20!71;UBERON:0007284!1.21e-20!71;UBERON:0000955!5.06e-20!50;UBERON:0006238!5.06e-20!50;UBERON:0002616!2.85e-19!49;UBERON:0002791!3.95e-19!29;UBERON:0003528!3.95e-19!29;UBERON:0001893!3.95e-19!29;UBERON:0000033!6.65e-19!63;UBERON:0003080!7.84e-18!40;UBERON:0004121!1.27e-17!102;UBERON:0000924!1.27e-17!102;UBERON:0006601!1.27e-17!102;UBERON:0002780!3.93e-17!39;UBERON:0001890!3.93e-17!39;UBERON:0006240!3.93e-17!39;UBERON:0003056!8.70e-17!49;UBERON:0000956!3.96e-14!21;UBERON:0001869!3.96e-14!21;UBERON:0000203!3.96e-14!21;UBERON:0002619!1.07e-10!17;UBERON:0007811!6.61e-10!86;UBERON:0002021!1.56e-09!10;UBERON:0000411!1.56e-09!10;UBERON:0001950!1.56e-09!10;UBERON:0000153!1.42e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.29e-34,34;UBERON:0000073,1.13e-31,54;UBERON:0003528,5.60e-30,29;UBERON:0002791,5.60e-30,29;UBERON:0001893,5.60e-30,29;UBERON:0001049,1.92e-29,52;UBERON:0005068,1.92e-29,52;UBERON:0006241,1.92e-29,52;UBERON:0007135,1.92e-29,52;UBERON:0001017,3.68e-28,73;UBERON:0001016,4.58e-27,75;UBERON:0000955,4.85e-25,47;UBERON:0006238,4.85e-25,47;UBERON:0003080,5.52e-25,40;UBERON:0002616,7.14e-24,46;UBERON:0002780,7.41e-24,39;UBERON:0001890,7.41e-24,39;UBERON:0006240,7.41e-24,39;UBERON:0002346,7.95e-22,64;UBERON:0003075,7.95e-22,64;UBERON:0007284,7.95e-22,64;UBERON:0000956,1.28e-21,21;UBERON:0001869,1.28e-21,21;UBERON:0000203,1.28e-21,21;UBERON:0004121,9.27e-20,95;UBERON:0000924,9.27e-20,95;UBERON:0006601,9.27e-20,95;UBERON:0010371,6.12e-19,73;UBERON:0003056,1.02e-18,49;UBERON:0002619,6.20e-16,17;UBERON:0002021,7.24e-15,10;UBERON:0000411,7.24e-15,10;UBERON:0001950,7.24e-15,10;UBERON:0010314,8.79e-13,92;UBERON:0002420,2.56e-09,8;UBERON:0007245,2.56e-09,8;UBERON:0010009,2.56e-09,8;UBERON:0010011,2.56e-09,8;UBERON:0000454,2.56e-09,8;UBERON:0000025,1.02e-07,114;UBERON:0004111,3.74e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,1.82084814773638,4.23192783417626,2.53532561402472,0,0,0,0.988866362566974,0,0,0,7.67303131082735,6.48028503992115,4.83747411108179,2.85650984403804,0.441737081903227,2.81728838194394,0.670918297127655,3.67687514644008,3.30347642998166,1.65993539510744,2.61131106535614,2.1101806036831,1.9212405156506,1.56274011167028,1.3959149950069,2.8138130501584,1.5279824777681,5.00868595305235,5.69486723196412,3.16879057903011,0,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.913396434936424,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,2.54644086988199,2.28750301409313,1.88481528169297,3.82413504423008,3.83573185995496,3.1168206683934,1.78465389374533,0.611036183101898,0,0,0,0.130120442962704,0,0.360124259610698,0.150704817835715,0.136072998302656,0.512454881139399,0,0.517406741478031,0,0,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,8.62188789112922,4.01327988279209,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.69586879162067,0,0,0,0.390438744296638,0.861693590931196,0,0,0,0,0.584511715822624,0,2.89189184779626,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,5.0827665835536,5.52390283808612,9.73922372846974,4.46818274093588,4.7955776383945,4.5323633843382,2.02506750069542,3.60256962579376,3.17199686288943,2.5888015587591,0.415149390336707,0.798049746802062,1.02440163452481,1.45864030240976,2.51535795153579,2.02227859295016,1.77797382241292,1.23621034343337,2.24643446714271,1.76888048234658,1.01391719956096,0.754505365544305,1.96647165686753,0.640251524048693,0.631790158511746,0.952587382566147,1.0429589335037,0.964546102318525,1.23625770240992,0.883193520806384,0.685738504770831,1.4198064492747,1.1921809497366,1.59881058295561,1.31753132581463,0.930760686808441,1.64635175585495,0.526139422875686,0.543216455383447,1.12228454331548,1.06771516311757,0.886540341380071,1.63692417267876,1.39443157067369,1.15743966588685,1.24905288968973,0.467863216890817,0.859484216193193,0,0.220591419119515,0 | |||
|short_description=p9@Rabgap1l | |||
}} |
Revision as of 19:24, 13 September 2013
Short description: | p9@Rabgap1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Rabgap1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -420bp_to_ENSMUST00000028052, NM_001038621, uc007deh.1_5end |
EntrezGene: | Rabgap1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.22e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-23 | 23 |
neuron | 1.64e-14 | 33 |
neuronal stem cell | 1.64e-14 | 33 |
neuroblast | 1.64e-14 | 33 |
electrically signaling cell | 1.64e-14 | 33 |
electrically responsive cell | 2.48e-11 | 39 |
electrically active cell | 2.48e-11 | 39 |
ectodermal cell | 2.24e-10 | 44 |
neurectodermal cell | 2.24e-10 | 44 |
neural cell | 1.01e-09 | 43 |
neuron of cerebral cortex | 6.44e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.