FFCP PHASE1:Mm9::chr2:181501710..181501742,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17932|HGNC=|MCL_coexpression_id=367|UniProt=Q8CFC2|association_with_transcript=0bp_to_ENSMUST00000156190,NM_001171616,NM_008665,uc008ons.2,uc012cmw.1_5end|description=CAGE_peak_2_at_Myt1_5end|id=chr2:181501710..181501742,+|ontology_enrichment_celltype=CL:0000540!5.87e-22!33;CL:0000047!5.87e-22!33;CL:0000031!5.87e-22!33;CL:0000404!5.87e-22!33;CL:0000117!7.56e-18!23;CL:0000337!7.56e-18!23;CL:0000221!6.56e-17!44;CL:0000133!6.56e-17!44;CL:0002319!1.15e-16!43;CL:0000393!3.44e-16!39;CL:0000211!3.44e-16!39;CL:0000055!3.61e-12!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.48e-30,33;CL:0000047,2.48e-30,33;CL:0000031,2.48e-30,33;CL:0000404,2.48e-30,33;CL:0000117,7.49e-27,23;CL:0000337,7.49e-27,23;CL:0000393,4.68e-24,39;CL:0000211,4.68e-24,39;CL:0002319,7.28e-21,43;CL:0000221,3.69e-20,44;CL:0000133,3.69e-20,44;CL:0002321,3.75e-09,70;CL:0002609,1.16e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.52e-38!102;UBERON:0000924!4.52e-38!102;UBERON:0006601!4.52e-38!102;UBERON:0002346!1.56e-35!71;UBERON:0003075!1.56e-35!71;UBERON:0007284!1.56e-35!71;UBERON:0000073!4.18e-35!75;UBERON:0001016!4.18e-35!75;UBERON:0001017!5.55e-35!73;UBERON:0005743!5.55e-35!73;UBERON:0000033!8.15e-29!63;UBERON:0003056!1.30e-25!49;UBERON:0001049!3.87e-25!52;UBERON:0005068!3.87e-25!52;UBERON:0006241!3.87e-25!52;UBERON:0007135!3.87e-25!52;UBERON:0000955!1.38e-24!50;UBERON:0006238!1.38e-24!50;UBERON:0002616!9.89e-24!49;UBERON:0003080!3.43e-20!40;UBERON:0002780!2.23e-19!39;UBERON:0001890!2.23e-19!39;UBERON:0006240!2.23e-19!39;UBERON:0002020!2.31e-17!34;UBERON:0007811!3.68e-15!86;UBERON:0002791!1.77e-14!29;UBERON:0003528!1.77e-14!29;UBERON:0001893!1.77e-14!29;UBERON:0000153!1.77e-12!94;UBERON:0000956!6.75e-09!21;UBERON:0001869!6.75e-09!21;UBERON:0000203!6.75e-09!21;UBERON:0002420!3.22e-07!8;UBERON:0007245!3.22e-07!8;UBERON:0010009!3.22e-07!8;UBERON:0010011!3.22e-07!8;UBERON:0000454!3.22e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.01e-41,73;UBERON:0001016,3.73e-40,75;UBERON:0002346,1.87e-39,64;UBERON:0003075,1.87e-39,64;UBERON:0007284,1.87e-39,64;UBERON:0004121,2.42e-39,95;UBERON:0000924,2.42e-39,95;UBERON:0006601,2.42e-39,95;UBERON:0000073,1.42e-33,54;UBERON:0010371,1.26e-32,73;UBERON:0001049,5.32e-31,52;UBERON:0005068,5.32e-31,52;UBERON:0006241,5.32e-31,52;UBERON:0007135,5.32e-31,52;UBERON:0003056,2.18e-28,49;UBERON:0010314,1.98e-27,92;UBERON:0000955,9.04e-27,47;UBERON:0006238,9.04e-27,47;UBERON:0002616,1.47e-25,46;UBERON:0003080,9.74e-23,40;UBERON:0002020,1.10e-21,34;UBERON:0002780,1.41e-21,39;UBERON:0001890,1.41e-21,39;UBERON:0006240,1.41e-21,39;UBERON:0003528,2.32e-17,29;UBERON:0002791,2.32e-17,29;UBERON:0001893,2.32e-17,29;UBERON:0002420,2.40e-10,8;UBERON:0007245,2.40e-10,8;UBERON:0010009,2.40e-10,8;UBERON:0010011,2.40e-10,8;UBERON:0000454,2.40e-10,8;UBERON:0000956,2.50e-09,21;UBERON:0001869,2.50e-09,21;UBERON:0000203,2.50e-09,21;UBERON:0003076,1.42e-08,12;UBERON:0003057,1.42e-08,12;UBERON:0000025,1.64e-07,114;UBERON:0000369,2.40e-07,5;UBERON:0002435,2.40e-07,5;UBERON:0000204,2.40e-07,5;UBERON:0010082,2.40e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,4.7609188134483,8.87363964908651,0,0,0,0,0,0.898800331555214,0.384218305321555,5.28817022773236,5.40023753326763,5.04779907243317,1.71390590642282,1.98781686856452,8.45186514583183,10.8305382250607,9.19218786610021,4.40463523997555,7.66124028511126,4.30098293117482,9.10015385338338,11.8933936683133,9.37644067002168,3.07101298901519,5.6276261003168,4.73674568108111,1.76777151284201,3.98640706237488,5.03278503728312,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,1.48442139064825,0.867426633830679,3.34912026143355,0.691846491768175,1.65794904607885,1.52865319276416,0.251333182659351,0,0.144599356919912,0,0,0,0,0,16.3957246326466,18.431310199584,0,0,0,0,7.78911324905078,3.20250421973039,5.02617408451458,2.9550134432687,2.04572365864264,3.74018480207208,6.32740925964255,0.101839363850316,0,0,2.31486041475121,0.260240885925407,0.919608417733892,4.32149111532838,2.86339153887859,4.08218994907967,5.63700369253339,5.528401749024,8.79591460512653,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,3.70456604565424,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.6335622843583,0,0,1.26203287766503,1.17131623288992,2.58508077279359,1.67278158566786,1.55959071857676,3.11384183867716,0.809621403349789,2.33804686329049,3.95287777946523,8.67567554338879,0,0,0,0.164970122972535,0,0,0.302323556964751,0.754420319023592,0,0,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,6.46835250932197,0.540183282093931,0.388076051348264,0.428674070063185,2.6601035046341,4.63758925765383,4.11372551505302,1.522324745573,0,0,0,0,0,0,0,0.164140899745061,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.324016022465404,0.209088296014469,0.218362563746178,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.71853182343688,0.685082519770642,1.5107877947794,1.35004500046361,1.80128481289688,0.453142408984205,1.03552062350364,0.518936737920883,2.39414924040619,1.70733605754134,1.21553358534147,0.628839487883947,0,1.11123363900808,0,0.962757628775446,0.758091635291392,0.25347929989024,0.754505365544305,1.12369808963859,1.28050304809739,0.516919220600519,1.42888107384922,0.927074607558844,1.54327376370964,0.412085900803307,0.883193520806384,1.37147700954166,0,0.238436189947321,1.30811774969096,0.941093804153306,1.01537529470012,0.73171189149109,0.789209134313529,0.950628796921032,0,0.711810108745045,0.788035859004508,0.409231043169689,0.77468420592983,0.578719832943424,2.74791635731741,0.935726433781634,0.644613162144895,0.57386499620653,0,0|short_description=p2@Myt1}} | ||
|EntrezGene=17932 | |||
|HGNC= | |||
|MCL_coexpression_id=367 | |||
|UniProt=Q8CFC2 | |||
|association_with_transcript=0bp_to_ENSMUST00000156190,NM_001171616,NM_008665,uc008ons.2,uc012cmw.1_5end | |||
|description=CAGE_peak_2_at_Myt1_5end | |||
|id=chr2:181501710..181501742,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.87e-22!33;CL:0000047!5.87e-22!33;CL:0000031!5.87e-22!33;CL:0000404!5.87e-22!33;CL:0000117!7.56e-18!23;CL:0000337!7.56e-18!23;CL:0000221!6.56e-17!44;CL:0000133!6.56e-17!44;CL:0002319!1.15e-16!43;CL:0000393!3.44e-16!39;CL:0000211!3.44e-16!39;CL:0000055!3.61e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.48e-30,33;CL:0000047,2.48e-30,33;CL:0000031,2.48e-30,33;CL:0000404,2.48e-30,33;CL:0000117,7.49e-27,23;CL:0000337,7.49e-27,23;CL:0000393,4.68e-24,39;CL:0000211,4.68e-24,39;CL:0002319,7.28e-21,43;CL:0000221,3.69e-20,44;CL:0000133,3.69e-20,44;CL:0002321,3.75e-09,70;CL:0002609,1.16e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.52e-38!102;UBERON:0000924!4.52e-38!102;UBERON:0006601!4.52e-38!102;UBERON:0002346!1.56e-35!71;UBERON:0003075!1.56e-35!71;UBERON:0007284!1.56e-35!71;UBERON:0000073!4.18e-35!75;UBERON:0001016!4.18e-35!75;UBERON:0001017!5.55e-35!73;UBERON:0005743!5.55e-35!73;UBERON:0000033!8.15e-29!63;UBERON:0003056!1.30e-25!49;UBERON:0001049!3.87e-25!52;UBERON:0005068!3.87e-25!52;UBERON:0006241!3.87e-25!52;UBERON:0007135!3.87e-25!52;UBERON:0000955!1.38e-24!50;UBERON:0006238!1.38e-24!50;UBERON:0002616!9.89e-24!49;UBERON:0003080!3.43e-20!40;UBERON:0002780!2.23e-19!39;UBERON:0001890!2.23e-19!39;UBERON:0006240!2.23e-19!39;UBERON:0002020!2.31e-17!34;UBERON:0007811!3.68e-15!86;UBERON:0002791!1.77e-14!29;UBERON:0003528!1.77e-14!29;UBERON:0001893!1.77e-14!29;UBERON:0000153!1.77e-12!94;UBERON:0000956!6.75e-09!21;UBERON:0001869!6.75e-09!21;UBERON:0000203!6.75e-09!21;UBERON:0002420!3.22e-07!8;UBERON:0007245!3.22e-07!8;UBERON:0010009!3.22e-07!8;UBERON:0010011!3.22e-07!8;UBERON:0000454!3.22e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.01e-41,73;UBERON:0001016,3.73e-40,75;UBERON:0002346,1.87e-39,64;UBERON:0003075,1.87e-39,64;UBERON:0007284,1.87e-39,64;UBERON:0004121,2.42e-39,95;UBERON:0000924,2.42e-39,95;UBERON:0006601,2.42e-39,95;UBERON:0000073,1.42e-33,54;UBERON:0010371,1.26e-32,73;UBERON:0001049,5.32e-31,52;UBERON:0005068,5.32e-31,52;UBERON:0006241,5.32e-31,52;UBERON:0007135,5.32e-31,52;UBERON:0003056,2.18e-28,49;UBERON:0010314,1.98e-27,92;UBERON:0000955,9.04e-27,47;UBERON:0006238,9.04e-27,47;UBERON:0002616,1.47e-25,46;UBERON:0003080,9.74e-23,40;UBERON:0002020,1.10e-21,34;UBERON:0002780,1.41e-21,39;UBERON:0001890,1.41e-21,39;UBERON:0006240,1.41e-21,39;UBERON:0003528,2.32e-17,29;UBERON:0002791,2.32e-17,29;UBERON:0001893,2.32e-17,29;UBERON:0002420,2.40e-10,8;UBERON:0007245,2.40e-10,8;UBERON:0010009,2.40e-10,8;UBERON:0010011,2.40e-10,8;UBERON:0000454,2.40e-10,8;UBERON:0000956,2.50e-09,21;UBERON:0001869,2.50e-09,21;UBERON:0000203,2.50e-09,21;UBERON:0003076,1.42e-08,12;UBERON:0003057,1.42e-08,12;UBERON:0000025,1.64e-07,114;UBERON:0000369,2.40e-07,5;UBERON:0002435,2.40e-07,5;UBERON:0000204,2.40e-07,5;UBERON:0010082,2.40e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,4.7609188134483,8.87363964908651,0,0,0,0,0,0.898800331555214,0.384218305321555,5.28817022773236,5.40023753326763,5.04779907243317,1.71390590642282,1.98781686856452,8.45186514583183,10.8305382250607,9.19218786610021,4.40463523997555,7.66124028511126,4.30098293117482,9.10015385338338,11.8933936683133,9.37644067002168,3.07101298901519,5.6276261003168,4.73674568108111,1.76777151284201,3.98640706237488,5.03278503728312,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,1.48442139064825,0.867426633830679,3.34912026143355,0.691846491768175,1.65794904607885,1.52865319276416,0.251333182659351,0,0.144599356919912,0,0,0,0,0,16.3957246326466,18.431310199584,0,0,0,0,7.78911324905078,3.20250421973039,5.02617408451458,2.9550134432687,2.04572365864264,3.74018480207208,6.32740925964255,0.101839363850316,0,0,2.31486041475121,0.260240885925407,0.919608417733892,4.32149111532838,2.86339153887859,4.08218994907967,5.63700369253339,5.528401749024,8.79591460512653,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,3.70456604565424,0,0,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.6335622843583,0,0,1.26203287766503,1.17131623288992,2.58508077279359,1.67278158566786,1.55959071857676,3.11384183867716,0.809621403349789,2.33804686329049,3.95287777946523,8.67567554338879,0,0,0,0.164970122972535,0,0,0.302323556964751,0.754420319023592,0,0,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,6.46835250932197,0.540183282093931,0.388076051348264,0.428674070063185,2.6601035046341,4.63758925765383,4.11372551505302,1.522324745573,0,0,0,0,0,0,0,0.164140899745061,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.324016022465404,0.209088296014469,0.218362563746178,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.71853182343688,0.685082519770642,1.5107877947794,1.35004500046361,1.80128481289688,0.453142408984205,1.03552062350364,0.518936737920883,2.39414924040619,1.70733605754134,1.21553358534147,0.628839487883947,0,1.11123363900808,0,0.962757628775446,0.758091635291392,0.25347929989024,0.754505365544305,1.12369808963859,1.28050304809739,0.516919220600519,1.42888107384922,0.927074607558844,1.54327376370964,0.412085900803307,0.883193520806384,1.37147700954166,0,0.238436189947321,1.30811774969096,0.941093804153306,1.01537529470012,0.73171189149109,0.789209134313529,0.950628796921032,0,0.711810108745045,0.788035859004508,0.409231043169689,0.77468420592983,0.578719832943424,2.74791635731741,0.935726433781634,0.644613162144895,0.57386499620653,0,0 | |||
|short_description=p2@Myt1 | |||
}} |
Revision as of 23:17, 13 September 2013
Short description: | p2@Myt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Myt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | 0bp_to_ENSMUST00000156190, NM_001171616, NM_008665, uc008ons.2, uc012cmw.1_5end |
EntrezGene: | Myt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.48e-30 | 33 |
neuronal stem cell | 2.48e-30 | 33 |
neuroblast | 2.48e-30 | 33 |
electrically signaling cell | 2.48e-30 | 33 |
CNS neuron (sensu Vertebrata) | 7.49e-27 | 23 |
neuroblast (sensu Vertebrata) | 7.49e-27 | 23 |
electrically responsive cell | 4.68e-24 | 39 |
electrically active cell | 4.68e-24 | 39 |
neural cell | 7.28e-21 | 43 |
ectodermal cell | 3.69e-20 | 44 |
neurectodermal cell | 3.69e-20 | 44 |
embryonic cell | 3.75e-09 | 70 |
neuron of cerebral cortex | 1.16e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.