FFCP PHASE1:Hg19::chr8:120079417..120079436,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10584|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2220|TSSclassifier=S|UniProt=Q9Y6Z7|association_with_transcript=0bp_to_NM_006438,uc003yoo.2_5end|coexpression_cluster_id=C4721|description=CAGE_peak_2_at_COLEC10_5end|id=chr8:120079417..120079436,+|ontology_enrichment_celltype=CL:0002622!1.21e-10!3;CL:0002504!1.66e-10!3;CL:1000279!1.66e-10!3;CL:1000280!1.66e-10!3;CL:0002556!4.74e-08!6;CL:0002195!7.87e-08!2;CL:0002571!7.87e-08!2;CL:1000487!5.67e-07!2|ontology_enrichment_celltype_v019=CL:0002622;7.62e-21;3!CL:0002504;9.33e-21;3!CL:1000279;9.33e-21;3!CL:1000280;9.33e-21;3!CL:0002195;5.42e-15;2!CL:0002571;5.42e-15;2!CL:0000222;4.88e-08;1!CL:0000167;8.98e-08;1!CL:0000164;8.98e-08;1!CL:0000502;8.98e-08;1!CL:0000172;8.98e-08;1!CL:0000173;8.98e-08;1|ontology_enrichment_celltype_v019_2=CL:0002622,5.43e-21,3;CL:0002504,1.07e-20,3;CL:1000279,1.07e-20,3;CL:1000280,1.07e-20,3;CL:0002195,5.62e-15,2;CL:0002571,5.62e-15,2;CL:0000167,7.10e-08,1;CL:0000164,7.10e-08,1;CL:0000502,7.10e-08,1;CL:0000172,7.10e-08,1;CL:0000173,7.10e-08,1;CL:0002351,7.10e-08,1|ontology_enrichment_development_v019=UBERON:0003124;5.99e-08;1!CL:0002351;8.98e-08;1!UBERON:0003099;8.98e-08;1!UBERON:0003852;8.98e-08;1|ontology_enrichment_disease=DOID:3307!9.87e-08!2|ontology_enrichment_disease_v019=DOID:3307;9.74e-15;2!DOID:3571;1.90e-08;1!DOID:4430;8.98e-08;1|ontology_enrichment_disease_v019_2=DOID:3307,9.10e-15,2;DOID:3571,1.91e-08,1;DOID:4430,7.10e-08,1|ontology_enrichment_uberon=UBERON:0003929!3.44e-11!54;UBERON:0005256!1.11e-10!143;UBERON:0001007!4.56e-10!155;UBERON:0001555!4.56e-10!155;UBERON:0007026!4.56e-10!155;UBERON:0002367!7.49e-10!11;UBERON:0010147!7.49e-10!11;UBERON:0009846!7.49e-10!11;UBERON:0003353!7.49e-10!11;UBERON:0004902!7.49e-10!11;UBERON:0003820!7.49e-10!11;UBERON:0009847!7.49e-10!11;UBERON:0004119!1.70e-09!169;UBERON:0000925!1.70e-09!169;UBERON:0006595!1.70e-09!169;UBERON:0003937!5.75e-09!12;UBERON:0005399!5.75e-09!12;UBERON:0001758!4.74e-08!6;UBERON:0003672!4.74e-08!6;UBERON:0005911!5.13e-08!82;UBERON:0002107!1.29e-07!19;UBERON:0006925!1.29e-07!19;UBERON:0008836!1.29e-07!19;UBERON:0000162!1.41e-07!14;UBERON:0001353!1.41e-07!14;UBERON:0000163!1.41e-07!14;UBERON:0006866!1.41e-07!14;UBERON:0000164!1.41e-07!14;UBERON:0000931!1.41e-07!14;UBERON:0000075!1.49e-07!13;UBERON:0005944!1.49e-07!13;UBERON:0004288!1.49e-07!13;UBERON:0003089!1.49e-07!13;UBERON:0002100!3.39e-07!216;UBERON:0009497!4.61e-07!25;UBERON:0000015!4.61e-07!25;UBERON:0002423!4.61e-07!25;UBERON:0006235!4.61e-07!25;UBERON:0004161!4.61e-07!25;UBERON:0001046!4.73e-07!19;UBERON:0004122!5.07e-07!15|ontology_enrichment_uberon_v019=UBERON:0002367;4.38e-15;11!UBERON:0010147;4.38e-15;11!UBERON:0003937;8.16e-14;12!UBERON:0005399;8.16e-14;12!UBERON:0002107;9.11e-13;19!UBERON:0006925;9.11e-13;19!UBERON:0002423;1.44e-09;25!UBERON:0000077;2.08e-08;27!UBERON:0002530;7.23e-08;57!UBERON:0005705;8.98e-08;1!UBERON:0008193;8.98e-08;1!UBERON:0010912;8.98e-08;1!UBERON:0002514;8.98e-08;1!UBERON:0003457;8.98e-08;1!UBERON:0008907;8.98e-08;1!UBERON:0008001;8.98e-08;1!UBERON:0007213;8.98e-08;1!UBERON:0009891;8.98e-08;1!UBERON:0007914;8.98e-08;1!UBERON:0007375;8.98e-08;1!UBERON:0003323;8.98e-08;1!UBERON:0010258;8.98e-08;1!UBERON:0005253;8.98e-08;1!UBERON:0007842;8.98e-08;1!UBERON:0002397;8.98e-08;1!UBERON:0003113;8.98e-08;1!UBERON:0003277;8.98e-08;1!UBERON:0001709;8.98e-08;1!UBERON:0002244;8.98e-08;1!UBERON:0005620;8.98e-08;1!UBERON:0010364;8.98e-08;1!UBERON:0004288;8.98e-08;1!UBERON:0003101;1.93e-07;22!UBERON:0000079;1.93e-07;22!UBERON:0001135;2.88e-07;15!UBERON:0001155;2.95e-07;9!UBERON:0002365;3.35e-07;31!UBERON:0002330;3.35e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0003929,5.03e-16,54;UBERON:0002367,4.00e-15,11;UBERON:0010147,4.00e-15,11;UBERON:0009846,4.00e-15,11;UBERON:0003353,4.00e-15,11;UBERON:0004902,4.00e-15,11;UBERON:0003820,4.00e-15,11;UBERON:0009847,4.00e-15,11;UBERON:0003937,7.52e-14,12;UBERON:0005399,7.52e-14,12;UBERON:0002107,9.21e-13,19;UBERON:0006925,9.21e-13,19;UBERON:0008836,9.21e-13,19;UBERON:0002530,4.74e-12,59;UBERON:0000162,7.60e-12,14;UBERON:0001353,7.60e-12,14;UBERON:0000163,7.60e-12,14;UBERON:0006866,7.60e-12,14;UBERON:0000164,7.60e-12,14;UBERON:0000931,7.60e-12,14;UBERON:0005911,1.48e-11,82;UBERON:0004921,2.04e-11,118;UBERON:0001007,2.20e-11,145;UBERON:0001555,2.20e-11,145;UBERON:0007026,2.20e-11,145;UBERON:0004119,2.46e-11,160;UBERON:0000925,2.46e-11,160;UBERON:0006595,2.46e-11,160;UBERON:0004122,4.82e-11,15;UBERON:0005256,5.50e-11,122;UBERON:0008835,6.04e-11,22;UBERON:0003894,6.04e-11,22;UBERON:0009854,1.91e-10,23;UBERON:0007499,1.46e-09,25;UBERON:0009497,1.46e-09,25;UBERON:0000015,1.46e-09,25;UBERON:0002423,1.46e-09,25;UBERON:0006235,1.46e-09,25;UBERON:0004161,1.46e-09,25;UBERON:0009856,3.57e-09,26;UBERON:0003104,8.88e-09,160;UBERON:0009142,8.88e-09,160;UBERON:0001046,1.13e-08,19;UBERON:0000490,1.45e-08,148;UBERON:0003064,4.66e-08,28;UBERON:0000077,8.33e-08,29;UBERON:0005705,8.69e-08,1;UBERON:0008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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10584 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2220 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y6Z7 | |||
|association_with_transcript=0bp_to_NM_006438,uc003yoo.2_5end | |||
|coexpression_cluster_id=C4721 | |||
|description=CAGE_peak_2_at_COLEC10_5end | |||
|id=chr8:120079417..120079436,+ | |||
|ontology_enrichment_celltype=CL:0002622!1.21e-10!3;CL:0002504!1.66e-10!3;CL:1000279!1.66e-10!3;CL:1000280!1.66e-10!3;CL:0002556!4.74e-08!6;CL:0002195!7.87e-08!2;CL:0002571!7.87e-08!2;CL:1000487!5.67e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002622;7.62e-21;3!CL:0002504;9.33e-21;3!CL:1000279;9.33e-21;3!CL:1000280;9.33e-21;3!CL:0002195;5.42e-15;2!CL:0002571;5.42e-15;2!CL:0000222;4.88e-08;1!CL:0000167;8.98e-08;1!CL:0000164;8.98e-08;1!CL:0000502;8.98e-08;1!CL:0000172;8.98e-08;1!CL:0000173;8.98e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,5.43e-21,3;CL:0002504,1.07e-20,3;CL:1000279,1.07e-20,3;CL:1000280,1.07e-20,3;CL:0002195,5.62e-15,2;CL:0002571,5.62e-15,2;CL:0000167,7.10e-08,1;CL:0000164,7.10e-08,1;CL:0000502,7.10e-08,1;CL:0000172,7.10e-08,1;CL:0000173,7.10e-08,1;CL:0002351,7.10e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.99e-08;1!CL:0002351;8.98e-08;1!UBERON:0003099;8.98e-08;1!UBERON:0003852;8.98e-08;1 | |||
|ontology_enrichment_disease=DOID:3307!9.87e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3307;9.74e-15;2!DOID:3571;1.90e-08;1!DOID:4430;8.98e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.10e-15,2;DOID:3571,1.91e-08,1;DOID:4430,7.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003929!3.44e-11!54;UBERON:0005256!1.11e-10!143;UBERON:0001007!4.56e-10!155;UBERON:0001555!4.56e-10!155;UBERON:0007026!4.56e-10!155;UBERON:0002367!7.49e-10!11;UBERON:0010147!7.49e-10!11;UBERON:0009846!7.49e-10!11;UBERON:0003353!7.49e-10!11;UBERON:0004902!7.49e-10!11;UBERON:0003820!7.49e-10!11;UBERON:0009847!7.49e-10!11;UBERON:0004119!1.70e-09!169;UBERON:0000925!1.70e-09!169;UBERON:0006595!1.70e-09!169;UBERON:0003937!5.75e-09!12;UBERON:0005399!5.75e-09!12;UBERON:0001758!4.74e-08!6;UBERON:0003672!4.74e-08!6;UBERON:0005911!5.13e-08!82;UBERON:0002107!1.29e-07!19;UBERON:0006925!1.29e-07!19;UBERON:0008836!1.29e-07!19;UBERON:0000162!1.41e-07!14;UBERON:0001353!1.41e-07!14;UBERON:0000163!1.41e-07!14;UBERON:0006866!1.41e-07!14;UBERON:0000164!1.41e-07!14;UBERON:0000931!1.41e-07!14;UBERON:0000075!1.49e-07!13;UBERON:0005944!1.49e-07!13;UBERON:0004288!1.49e-07!13;UBERON:0003089!1.49e-07!13;UBERON:0002100!3.39e-07!216;UBERON:0009497!4.61e-07!25;UBERON:0000015!4.61e-07!25;UBERON:0002423!4.61e-07!25;UBERON:0006235!4.61e-07!25;UBERON:0004161!4.61e-07!25;UBERON:0001046!4.73e-07!19;UBERON:0004122!5.07e-07!15 | |||
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|short_description=p2@COLEC10 | |||
}} |
Revision as of 03:18, 14 September 2013
Short description: | p2@COLEC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_COLEC10_5end |
Coexpression cluster: | C4721_Hepatocyte_Prostate_normal_hepatic_liver_sacrococcigeal_Mesenchymal |
Association with transcript: | 0bp_to_NM_006438, uc003yoo.2_5end |
EntrezGene: | COLEC10 |
HGNC: | 2220 |
UniProt: | Q9Y6Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 5.43e-21 | 3 |
enteric smooth muscle cell | 1.07e-20 | 3 |
smooth muscle cell of large intestine | 1.07e-20 | 3 |
smooth muscle cell of colon | 1.07e-20 | 3 |
hepatic stem cell | 5.62e-15 | 2 |
hepatic mesenchymal stem cell | 5.62e-15 | 2 |
peptide hormone secreting cell | 7.10e-08 | 1 |
enteroendocrine cell | 7.10e-08 | 1 |
type D enteroendocrine cell | 7.10e-08 | 1 |
somatostatin secreting cell | 7.10e-08 | 1 |
pancreatic D cell | 7.10e-08 | 1 |
progenitor cell of endocrine pancreas | 7.10e-08 | 1 |
Ontology term | p-value | n |
---|
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.