FFCP PHASE1:Mm9::chr4:126287063..126287140,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230757|HGNC=|MCL_coexpression_id=1|UniProt=Q8BP99|association_with_transcript=0bp_to_ENSMUST00000164362,NM_001013755,NM_001145950,uc008utp.2,uc012dlg.1_5end|description=CAGE_peak_1_at_5730409E04Rik_5end|id=chr4:126287063..126287140,+|ontology_enrichment_celltype=CL:0000055!1.14e-08!50;CL:0000221!3.90e-07!44;CL:0000133!3.90e-07!44;CL:0002319!5.60e-07!43|ontology_enrichment_celltype_v019_2=CL:0000221,3.79e-07,44;CL:0000133,3.79e-07,44;CL:0002319,5.45e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.92e-21!102;UBERON:0000924!6.92e-21!102;UBERON:0006601!6.92e-21!102;UBERON:0001017!2.82e-20!73;UBERON:0005743!2.82e-20!73;UBERON:0000073!9.37e-20!75;UBERON:0001016!9.37e-20!75;UBERON:0001049!2.28e-17!52;UBERON:0005068!2.28e-17!52;UBERON:0006241!2.28e-17!52;UBERON:0007135!2.28e-17!52;UBERON:0002346!1.53e-16!71;UBERON:0003075!1.53e-16!71;UBERON:0007284!1.53e-16!71;UBERON:0000033!2.23e-16!63;UBERON:0000955!4.65e-16!50;UBERON:0006238!4.65e-16!50;UBERON:0002616!1.39e-15!49;UBERON:0004111!2.54e-14!122;UBERON:0000025!2.30e-12!114;UBERON:0002020!9.07e-12!34;UBERON:0003080!6.70e-11!40;UBERON:0003056!1.35e-10!49;UBERON:0002780!2.15e-10!39;UBERON:0001890!2.15e-10!39;UBERON:0006240!2.15e-10!39;UBERON:0002791!6.64e-09!29;UBERON:0003528!6.64e-09!29;UBERON:0001893!6.64e-09!29;UBERON:0003076!7.86e-08!12;UBERON:0003057!7.86e-08!12;UBERON:0002021!9.70e-08!10;UBERON:0000411!9.70e-08!10;UBERON:0001950!9.70e-08!10;UBERON:0002619!4.12e-07!17;UBERON:0007811!7.05e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.56e-20,73;UBERON:0004121,2.79e-20,95;UBERON:0000924,2.79e-20,95;UBERON:0006601,2.79e-20,95;UBERON:0001016,8.54e-20,75;UBERON:0000073,9.41e-19,54;UBERON:0001049,2.10e-17,52;UBERON:0005068,2.10e-17,52;UBERON:0006241,2.10e-17,52;UBERON:0007135,2.10e-17,52;UBERON:0010371,4.33e-17,73;UBERON:0010314,3.21e-16,92;UBERON:0002346,3.22e-16,64;UBERON:0003075,3.22e-16,64;UBERON:0007284,3.22e-16,64;UBERON:0000955,3.31e-14,47;UBERON:0006238,3.31e-14,47;UBERON:0004111,3.69e-14,122;UBERON:0002616,9.61e-14,46;UBERON:0000025,3.28e-12,114;UBERON:0002020,8.60e-12,34;UBERON:0003080,6.39e-11,40;UBERON:0003056,1.29e-10,49;UBERON:0002780,2.05e-10,39;UBERON:0001890,2.05e-10,39;UBERON:0006240,2.05e-10,39;UBERON:0003528,6.40e-09,29;UBERON:0002791,6.40e-09,29;UBERON:0001893,6.40e-09,29;UBERON:0003076,7.61e-08,12;UBERON:0003057,7.61e-08,12;UBERON:0002021,9.40e-08,10;UBERON:0000411,9.40e-08,10;UBERON:0001950,9.40e-08,10;UBERON:0002619,4.01e-07,17|phase1_expression=10.7299727560212,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0.809901069559304,2.09868563438444,1.10411757875383,0.822686601634433,0.42438965179803,10.2051948181284,0,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0.7813353445238,0.523523743973798,0,0,0,11.9601977076798,11.8611009526832,9.54443111240744,22.6893489860931,13.2995345392072,20.6505011770404,18.8597002102055,18.1982348112971,17.2503077237966,0,0.725362142011344,0,14.663787854049,20.6304076755905,17.532851137433,17.1968991730658,27.5075309221457,29.7900759647904,23.7191172448392,23.1216646988896,15.7482450524245,18.7884608887725,22.7353636782752,26.3648097256196,18.0582603501131,3.42175720617976,1.35005938331691,3.15487442027073,93.12222091564,84.1509141025648,5.63457676388789,3.1629005436018,4.5960939330501,102.407769329431,72.9094700466422,66.8188419664659,21.2336923245612,20.4932321669398,26.045668527838,73.983494735366,69.7825636439283,58.5217288985183,85.7369183728373,63.2130262748017,33.9246991402047,3.63485727999283,7.10372665003784,13.3337664802772,8.60423876981386,2.719885334831,8.63525106620507,7.14754059192436,3.58421509677868,8.14577636764161,15.3387290320252,20.0035223544209,22.2603931941514,9.43650912503759,61.5967091588726,73.8935195149272,56.8853362522665,4.11332977921307,5.57391704045217,5.05524445014783,6.73684890342454,3.36619248741323,13.2113503767694,4.8575891494518,6.39377504455497,6.45723392316964,8.74191315205211,8.23120949949934,16.5879900555172,1.23597483867187,10.1219549843938,3.5384422077995,11.8089800461609,7.06692859073259,8.24287930329878,3.72783522436244,30.4492028892009,42.7271281899448,2.29911349687732,0.479260498023681,0,0.508280908292259,57.5196055314519,29.7375391832107,9.29842205635197,51.1043501365293,54.7231078686907,42.5965491347098,39.4246269254651,9.47106083807942,6.59356944233493,10.6143558542143,71.5502310014011,3.25301107406759,5.9774547152703,4.68161537493908,6.48030716693575,6.66757691683013,7.43059577652129,6.74652416830048,35.7010651619842,2.58681591519411,3.02569728268511,7.38994721488585,5.69908904311695,6.95118123063995,6.61679116392116,8.84863186554157,2.9855140022774,1.40442637462647,1.54408744268829,1.13665399758237,3.10688658803253,2.57978665979206,4.32148947506436,2.3674473558521,3.54175617145327,5.39934895105824,5.5808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| ||
|EntrezGene=230757 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BP99 | |||
|association_with_transcript=0bp_to_ENSMUST00000164362,NM_001013755,NM_001145950,uc008utp.2,uc012dlg.1_5end | |||
|description=CAGE_peak_1_at_5730409E04Rik_5end | |||
|id=chr4:126287063..126287140,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.14e-08!50;CL:0000221!3.90e-07!44;CL:0000133!3.90e-07!44;CL:0002319!5.60e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.79e-07,44;CL:0000133,3.79e-07,44;CL:0002319,5.45e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.92e-21!102;UBERON:0000924!6.92e-21!102;UBERON:0006601!6.92e-21!102;UBERON:0001017!2.82e-20!73;UBERON:0005743!2.82e-20!73;UBERON:0000073!9.37e-20!75;UBERON:0001016!9.37e-20!75;UBERON:0001049!2.28e-17!52;UBERON:0005068!2.28e-17!52;UBERON:0006241!2.28e-17!52;UBERON:0007135!2.28e-17!52;UBERON:0002346!1.53e-16!71;UBERON:0003075!1.53e-16!71;UBERON:0007284!1.53e-16!71;UBERON:0000033!2.23e-16!63;UBERON:0000955!4.65e-16!50;UBERON:0006238!4.65e-16!50;UBERON:0002616!1.39e-15!49;UBERON:0004111!2.54e-14!122;UBERON:0000025!2.30e-12!114;UBERON:0002020!9.07e-12!34;UBERON:0003080!6.70e-11!40;UBERON:0003056!1.35e-10!49;UBERON:0002780!2.15e-10!39;UBERON:0001890!2.15e-10!39;UBERON:0006240!2.15e-10!39;UBERON:0002791!6.64e-09!29;UBERON:0003528!6.64e-09!29;UBERON:0001893!6.64e-09!29;UBERON:0003076!7.86e-08!12;UBERON:0003057!7.86e-08!12;UBERON:0002021!9.70e-08!10;UBERON:0000411!9.70e-08!10;UBERON:0001950!9.70e-08!10;UBERON:0002619!4.12e-07!17;UBERON:0007811!7.05e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.56e-20,73;UBERON:0004121,2.79e-20,95;UBERON:0000924,2.79e-20,95;UBERON:0006601,2.79e-20,95;UBERON:0001016,8.54e-20,75;UBERON:0000073,9.41e-19,54;UBERON:0001049,2.10e-17,52;UBERON:0005068,2.10e-17,52;UBERON:0006241,2.10e-17,52;UBERON:0007135,2.10e-17,52;UBERON:0010371,4.33e-17,73;UBERON:0010314,3.21e-16,92;UBERON:0002346,3.22e-16,64;UBERON:0003075,3.22e-16,64;UBERON:0007284,3.22e-16,64;UBERON:0000955,3.31e-14,47;UBERON:0006238,3.31e-14,47;UBERON:0004111,3.69e-14,122;UBERON:0002616,9.61e-14,46;UBERON:0000025,3.28e-12,114;UBERON:0002020,8.60e-12,34;UBERON:0003080,6.39e-11,40;UBERON:0003056,1.29e-10,49;UBERON:0002780,2.05e-10,39;UBERON:0001890,2.05e-10,39;UBERON:0006240,2.05e-10,39;UBERON:0003528,6.40e-09,29;UBERON:0002791,6.40e-09,29;UBERON:0001893,6.40e-09,29;UBERON:0003076,7.61e-08,12;UBERON:0003057,7.61e-08,12;UBERON:0002021,9.40e-08,10;UBERON:0000411,9.40e-08,10;UBERON:0001950,9.40e-08,10;UBERON:0002619,4.01e-07,17 | |||
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| |||
|short_description=p1@5730409E04Rik | |||
}} |
Revision as of 03:46, 14 September 2013
Short description: | p1@5730409E04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_5730409E04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000164362, NM_001013755, NM_001145950, uc008utp.2, uc012dlg.1_5end |
EntrezGene: | 5730409E04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.79e-07 | 44 |
neurectodermal cell | 3.79e-07 | 44 |
neural cell | 5.45e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.