FFCP PHASE1:Mm9::chr6:77929646..77929702,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12386|HGNC=|MCL_coexpression_id=1|UniProt=E0CXB9,Q61301|association_with_transcript=0bp_to_ENSMUST00000160894,ENSMUST00000161846,NM_001109764,NM_009819,NM_145732,uc009cjq.2,uc012enl.1,uc012enm.1_5end|description=CAGE_peak_2_at_Ctnna2_5end|id=chr6:77929646..77929702,-|ontology_enrichment_celltype=CL:0000117!9.07e-15!23;CL:0000337!9.07e-15!23;CL:0000540!3.83e-14!33;CL:0000047!3.83e-14!33;CL:0000031!3.83e-14!33;CL:0000404!3.83e-14!33;CL:0000221!1.34e-13!44;CL:0000133!1.34e-13!44;CL:0002319!1.76e-13!43;CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0000055!3.02e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.77e-18,23;CL:0000337,4.77e-18,23;CL:0000540,4.95e-15,33;CL:0000047,4.95e-15,33;CL:0000031,4.95e-15,33;CL:0000404,4.95e-15,33;CL:0000221,2.40e-11,44;CL:0000133,2.40e-11,44;CL:0002319,3.51e-11,43;CL:0000393,4.48e-11,39;CL:0000211,4.48e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.95e-33!73;UBERON:0005743!5.95e-33!73;UBERON:0000073!1.11e-32!75;UBERON:0001016!1.11e-32!75;UBERON:0002346!1.77e-29!71;UBERON:0003075!1.77e-29!71;UBERON:0007284!1.77e-29!71;UBERON:0001049!6.60e-29!52;UBERON:0005068!6.60e-29!52;UBERON:0006241!6.60e-29!52;UBERON:0007135!6.60e-29!52;UBERON:0000033!7.03e-28!63;UBERON:0000955!8.49e-28!50;UBERON:0006238!8.49e-28!50;UBERON:0004121!2.40e-27!102;UBERON:0000924!2.40e-27!102;UBERON:0006601!2.40e-27!102;UBERON:0002616!4.03e-27!49;UBERON:0003056!1.55e-24!49;UBERON:0003080!8.19e-23!40;UBERON:0002020!1.56e-22!34;UBERON:0002780!4.03e-22!39;UBERON:0001890!4.03e-22!39;UBERON:0006240!4.03e-22!39;UBERON:0002791!1.43e-19!29;UBERON:0003528!1.43e-19!29;UBERON:0001893!1.43e-19!29;UBERON:0000956!1.11e-14!21;UBERON:0001869!1.11e-14!21;UBERON:0000203!1.11e-14!21;UBERON:0007811!1.43e-14!86;UBERON:0000153!3.22e-13!94;UBERON:0002619!6.48e-12!17;UBERON:0002021!5.66e-09!10;UBERON:0000411!5.66e-09!10;UBERON:0001950!5.66e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.44e-36,64;UBERON:0003075,7.44e-36,64;UBERON:0007284,7.44e-36,64;UBERON:0000073,1.12e-35,54;UBERON:0001017,5.92e-35,73;UBERON:0001049,7.17e-34,52;UBERON:0005068,7.17e-34,52;UBERON:0006241,7.17e-34,52;UBERON:0007135,7.17e-34,52;UBERON:0001016,2.40e-33,75;UBERON:0004121,4.74e-30,95;UBERON:0000924,4.74e-30,95;UBERON:0006601,4.74e-30,95;UBERON:0000955,6.49e-30,47;UBERON:0006238,6.49e-30,47;UBERON:0010371,2.01e-29,73;UBERON:0003056,2.10e-29,49;UBERON:0002616,4.30e-29,46;UBERON:0003080,3.30e-27,40;UBERON:0002020,8.46e-27,34;UBERON:0002780,2.39e-26,39;UBERON:0001890,2.39e-26,39;UBERON:0006240,2.39e-26,39;UBERON:0003528,4.24e-23,29;UBERON:0002791,4.24e-23,29;UBERON:0001893,4.24e-23,29;UBERON:0010314,1.26e-18,92;UBERON:0000956,5.39e-17,21;UBERON:0001869,5.39e-17,21;UBERON:0000203,5.39e-17,21;UBERON:0002619,1.47e-13,17;UBERON:0002021,8.17e-11,10;UBERON:0000411,8.17e-11,10;UBERON:0001950,8.17e-11,10;UBERON:0002420,3.20e-07,8;UBERON:0007245,3.20e-07,8;UBERON:0010009,3.20e-07,8;UBERON:0010011,3.20e-07,8;UBERON:0000454,3.20e-07,8;UBERON:0003076,4.86e-07,12;UBERON:0003057,4.86e-07,12|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.659058548203415,2.91644848611425,0.979904951377538,0,0,0,0,0,0,0,23.4687094597133,23.2756030879694,25.3532561402472,0,0,0,0,0,0.898800331555214,2.30530983192933,36.2913643079672,39.1517221161903,34.4932936616267,17.7103610330358,18.3320888989839,34.9098777762619,28.6577958344527,38.6071890376209,25.3266526298594,32.0495218593821,29.3388478519425,22.420668914133,21.4081086029639,27.0874952689515,22.3346399201105,23.6360296213306,27.350886352049,33.8822873294718,27.3353627134278,24.6047268489397,0.37863096666592,0.453429360640713,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,1.54927761754349,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,0,0.922461989024234,0.753613202763113,0.352766121407114,0.502666365318702,0,0,0,0,0,0,0,20.7874365878198,16.546289838263,0.255457055208591,0,0,0,30.407499799179,41.1750542536764,59.9371259578363,45.7157962105687,53.7002460393694,26.3890816590641,32.772735139687,0.305518091550949,0,0,2.10441855886474,1.82168620147785,1.83921683546778,3.24111833649629,4.37043971723574,4.83059143974428,5.12454881139399,3.74806898238915,4.65666067330228,0.215567992932842,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,0,0,0.995171334092466,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0,0,0,0,0,28.3891430561572,42.3967003002652,0,0,0.853153002140936,0.928946687441754,1.03093969057675,0,0.667134131534611,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.16296497644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| ||
|EntrezGene=12386 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E0CXB9,Q61301 | |||
|association_with_transcript=0bp_to_ENSMUST00000160894,ENSMUST00000161846,NM_001109764,NM_009819,NM_145732,uc009cjq.2,uc012enl.1,uc012enm.1_5end | |||
|description=CAGE_peak_2_at_Ctnna2_5end | |||
|id=chr6:77929646..77929702,- | |||
|ontology_enrichment_celltype=CL:0000117!9.07e-15!23;CL:0000337!9.07e-15!23;CL:0000540!3.83e-14!33;CL:0000047!3.83e-14!33;CL:0000031!3.83e-14!33;CL:0000404!3.83e-14!33;CL:0000221!1.34e-13!44;CL:0000133!1.34e-13!44;CL:0002319!1.76e-13!43;CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0000055!3.02e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.77e-18,23;CL:0000337,4.77e-18,23;CL:0000540,4.95e-15,33;CL:0000047,4.95e-15,33;CL:0000031,4.95e-15,33;CL:0000404,4.95e-15,33;CL:0000221,2.40e-11,44;CL:0000133,2.40e-11,44;CL:0002319,3.51e-11,43;CL:0000393,4.48e-11,39;CL:0000211,4.48e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.95e-33!73;UBERON:0005743!5.95e-33!73;UBERON:0000073!1.11e-32!75;UBERON:0001016!1.11e-32!75;UBERON:0002346!1.77e-29!71;UBERON:0003075!1.77e-29!71;UBERON:0007284!1.77e-29!71;UBERON:0001049!6.60e-29!52;UBERON:0005068!6.60e-29!52;UBERON:0006241!6.60e-29!52;UBERON:0007135!6.60e-29!52;UBERON:0000033!7.03e-28!63;UBERON:0000955!8.49e-28!50;UBERON:0006238!8.49e-28!50;UBERON:0004121!2.40e-27!102;UBERON:0000924!2.40e-27!102;UBERON:0006601!2.40e-27!102;UBERON:0002616!4.03e-27!49;UBERON:0003056!1.55e-24!49;UBERON:0003080!8.19e-23!40;UBERON:0002020!1.56e-22!34;UBERON:0002780!4.03e-22!39;UBERON:0001890!4.03e-22!39;UBERON:0006240!4.03e-22!39;UBERON:0002791!1.43e-19!29;UBERON:0003528!1.43e-19!29;UBERON:0001893!1.43e-19!29;UBERON:0000956!1.11e-14!21;UBERON:0001869!1.11e-14!21;UBERON:0000203!1.11e-14!21;UBERON:0007811!1.43e-14!86;UBERON:0000153!3.22e-13!94;UBERON:0002619!6.48e-12!17;UBERON:0002021!5.66e-09!10;UBERON:0000411!5.66e-09!10;UBERON:0001950!5.66e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.44e-36,64;UBERON:0003075,7.44e-36,64;UBERON:0007284,7.44e-36,64;UBERON:0000073,1.12e-35,54;UBERON:0001017,5.92e-35,73;UBERON:0001049,7.17e-34,52;UBERON:0005068,7.17e-34,52;UBERON:0006241,7.17e-34,52;UBERON:0007135,7.17e-34,52;UBERON:0001016,2.40e-33,75;UBERON:0004121,4.74e-30,95;UBERON:0000924,4.74e-30,95;UBERON:0006601,4.74e-30,95;UBERON:0000955,6.49e-30,47;UBERON:0006238,6.49e-30,47;UBERON:0010371,2.01e-29,73;UBERON:0003056,2.10e-29,49;UBERON:0002616,4.30e-29,46;UBERON:0003080,3.30e-27,40;UBERON:0002020,8.46e-27,34;UBERON:0002780,2.39e-26,39;UBERON:0001890,2.39e-26,39;UBERON:0006240,2.39e-26,39;UBERON:0003528,4.24e-23,29;UBERON:0002791,4.24e-23,29;UBERON:0001893,4.24e-23,29;UBERON:0010314,1.26e-18,92;UBERON:0000956,5.39e-17,21;UBERON:0001869,5.39e-17,21;UBERON:0000203,5.39e-17,21;UBERON:0002619,1.47e-13,17;UBERON:0002021,8.17e-11,10;UBERON:0000411,8.17e-11,10;UBERON:0001950,8.17e-11,10;UBERON:0002420,3.20e-07,8;UBERON:0007245,3.20e-07,8;UBERON:0010009,3.20e-07,8;UBERON:0010011,3.20e-07,8;UBERON:0000454,3.20e-07,8;UBERON:0003076,4.86e-07,12;UBERON:0003057,4.86e-07,12 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.659058548203415,2.91644848611425,0.979904951377538,0,0,0,0,0,0,0,23.4687094597133,23.2756030879694,25.3532561402472,0,0,0,0,0,0.898800331555214,2.30530983192933,36.2913643079672,39.1517221161903,34.4932936616267,17.7103610330358,18.3320888989839,34.9098777762619,28.6577958344527,38.6071890376209,25.3266526298594,32.0495218593821,29.3388478519425,22.420668914133,21.4081086029639,27.0874952689515,22.3346399201105,23.6360296213306,27.350886352049,33.8822873294718,27.3353627134278,24.6047268489397,0.37863096666592,0.453429360640713,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,1.54927761754349,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,0,0.922461989024234,0.753613202763113,0.352766121407114,0.502666365318702,0,0,0,0,0,0,0,20.7874365878198,16.546289838263,0.255457055208591,0,0,0,30.407499799179,41.1750542536764,59.9371259578363,45.7157962105687,53.7002460393694,26.3890816590641,32.772735139687,0.305518091550949,0,0,2.10441855886474,1.82168620147785,1.83921683546778,3.24111833649629,4.37043971723574,4.83059143974428,5.12454881139399,3.74806898238915,4.65666067330228,0.215567992932842,0.567318240503458,0.879755620819744,0.219195732427575,0.278047249225598,0,0,0.995171334092466,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0,0,0,0,0,28.3891430561572,42.3967003002652,0,0,0.853153002140936,0.928946687441754,1.03093969057675,0,0.667134131534611,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.119284958242,24.8488775575471,0,0,1.57754109708128,0.780877488593277,3.01592756825919,0.955875191810208,0,1.13230612315533,3.23848561339915,3.21481443702443,3.95287777946523,26.66966926301,0.425820255624806,0.178065603667255,0.81443479676788,0,0,0.971122544619926,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,8.85142974959849,1.8006109403131,1.94038025674132,2.14337035031592,3.72414490648775,4.28085162244969,5.26556865926787,1.522324745573,0,0,0.441056796109924,0.16488625294148,0,0,0,0,0.291480836629851,25.5886916774503,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.813277868507395,0.972048067396211,0,0.655087691238533,0.539457385539283,0.578574190077352,0,0.129614973291793,0,5.6369293868419,1.64468200648377,2.15096037594227,4.083474955225,3.09983576346555,2.87225413334323,4.5769323071844,3.3853140059427,5.24296722128554,6.52277126230216,5.18454011264158,0,0.810900861160657,0.410843828659309,0.389762468933385,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,77.9357542811552,58.9216302729186,68.7474616127276,58.9456415438848,64.3977568584404,49.8559972277202,51.9767325178491,49.5353323546642,56.1896587140414,50.7405105516784,1.97195960409936,2.79317411380722,5.12200817262403,7.29320151204882,3.5634237646757,7.72142735490059,6.88964856185007,7.41726206060019,8.66481865897901,6.31743029409494,8.11133759648767,5.09291121742406,4.96299989590377,7.04276676453562,6.77738533676237,6.66811167796303,7.53248118641561,8.68091492086673,8.65380391686944,6.32955356577908,6.17164654293748,5.50174999093946,5.48403236878838,5.81385666529314,7.15231291156513,6.59993941555077,5.67076715905595,5.5244639401947,7.60503037536826,6.17256498823512,8.77899134118889,7.68334962529395,7.36615877705441,8.36658942404216,5.98010494041538,9.74261253957989,3.97683734357194,4.08255002691767,1.53030665655075,1.10295709559758,0.695603506861264 | |||
|short_description=p2@Ctnna2 | |||
}} |
Revision as of 10:39, 14 September 2013
Short description: | p2@Ctnna2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ctnna2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000160894, ENSMUST00000161846, NM_001109764, NM_009819, NM_145732, uc009cjq.2, uc012enl.1, uc012enm.1_5end |
EntrezGene: | Ctnna2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.77e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.77e-18 | 23 |
neuron | 4.95e-15 | 33 |
neuronal stem cell | 4.95e-15 | 33 |
neuroblast | 4.95e-15 | 33 |
electrically signaling cell | 4.95e-15 | 33 |
ectodermal cell | 2.40e-11 | 44 |
neurectodermal cell | 2.40e-11 | 44 |
neural cell | 3.51e-11 | 43 |
electrically responsive cell | 4.48e-11 | 39 |
electrically active cell | 4.48e-11 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.