FFCP PHASE1:Hg19::chrX:37765302..37765334,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-65bp_to_ENST00000449263_5end|coexpression_cluster_id=C4871|description=CAGE_peak_1_at_ENST00000449263_5end|id=chrX:37765302..37765334,+|ontology_enrichment_celltype=CL:0000128!4.85e-08!7;CL:0000126!4.85e-08!7;CL:0000127!4.85e-08!7;CL:0002453!4.85e-08!7|ontology_enrichment_celltype_v019=CL:0002586;3.38e-11;3!CL:0000149;1.69e-08;4!CL:0000147;2.07e-08;14!CL:0000128;2.68e-08;7!CL:0000126;2.68e-08;7!CL:0000127;2.68e-08;7!CL:0002322;8.27e-07;5|ontology_enrichment_celltype_v019_2=CL:0002586,2.52e-11,3;CL:0000149,1.36e-08,4;CL:0000147,2.07e-08,14;CL:0000128,3.57e-08,7;CL:0000126,3.57e-08,7;CL:0000127,3.57e-08,7;CL:0002453,3.57e-08,7;CL:0002322,9.81e-07,5|ontology_enrichment_development_v019=UBERON:0010122;3.36e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;9.86e-09;4!DOID:1612;9.86e-09;4!DOID:1909;5.89e-08;2|ontology_enrichment_disease_v019_2=DOID:5093,7.71e-09,4;DOID:1612,7.71e-09,4;DOID:1909,5.50e-08,2|ontology_enrichment_uberon=UBERON:0005743!5.43e-34!86;UBERON:0000073!2.83e-31!94;UBERON:0001016!2.83e-31!94;UBERON:0002346!1.77e-30!90;UBERON:0001017!4.24e-30!82;UBERON:0003075!8.95e-29!86;UBERON:0007284!8.95e-29!86;UBERON:0000955!9.47e-27!69;UBERON:0006238!9.47e-27!69;UBERON:0001049!2.55e-26!57;UBERON:0005068!2.55e-26!57;UBERON:0006241!2.55e-26!57;UBERON:0007135!2.55e-26!57;UBERON:0002616!5.35e-25!59;UBERON:0003056!8.37e-24!61;UBERON:0000924!6.89e-23!173;UBERON:0006601!6.89e-23!173;UBERON:0004121!2.02e-21!169;UBERON:0003080!2.82e-19!42;UBERON:0002780!1.91e-18!41;UBERON:0001890!1.91e-18!41;UBERON:0006240!1.91e-18!41;UBERON:0000033!4.66e-18!123;UBERON:0002020!5.69e-18!34;UBERON:0003528!5.69e-18!34;UBERON:0001869!8.93e-18!32;UBERON:0001893!1.77e-17!34;UBERON:0002791!5.51e-17!33;UBERON:0000153!2.36e-16!129;UBERON:0007811!2.36e-16!129;UBERON:0000956!9.87e-12!25;UBERON:0000203!9.87e-12!25;UBERON:0007625!2.03e-10!11;UBERON:0002619!1.42e-09!22;UBERON:0007023!1.61e-09!115;UBERON:0000475!1.12e-08!365;UBERON:0002420!1.61e-08!9;UBERON:0007245!1.61e-08!9;UBERON:0010009!1.61e-08!9;UBERON:0010011!1.61e-08!9;UBERON:0000454!1.61e-08!9;UBERON:0003076!3.27e-08!15;UBERON:0003057!3.27e-08!15;UBERON:0002308!4.76e-08!9;UBERON:0000125!4.76e-08!9;UBERON:0001950!8.08e-08!20;UBERON:0000349!6.90e-07!5;UBERON:0000062!7.40e-07!511|ontology_enrichment_uberon_v019=UBERON:0007625;3.14e-14;11!UBERON:0000369;8.15e-14;4!UBERON:0002435;8.15e-14;4!UBERON:0000204;8.15e-14;4!UBERON:0001781;3.38e-11;3!UBERON:0001782;3.38e-11;3!UBERON:0005383;5.19e-11;3!UBERON:0005382;5.19e-11;3!UBERON:0000349;1.01e-10;5!UBERON:0000125;3.03e-09;9!UBERON:0002308;3.03e-09;9!UBERON:0002420;4.22e-09;9!UBERON:0007245;4.22e-09;9!UBERON:0010009;4.22e-09;9!UBERON:0010011;4.22e-09;9!UBERON:0000454;4.22e-09;9!UBERON:0001873;3.36e-08;2!UBERON:0009663;6.48e-08;7!UBERON:0000019;8.21e-08;19!UBERON:0000047;8.21e-08;19!UBERON:0004088;8.21e-08;19!UBERON:0010230;8.21e-08;19!UBERON:0001954;9.53e-08;2!UBERON:0003022;9.53e-08;2!UBERON:0002421;9.53e-08;2!UBERON:0002600;9.53e-08;2!UBERON:0000970;2.26e-07;20!UBERON:0003528;3.33e-07;34!UBERON:0002020;3.33e-07;34!UBERON:0002791;5.36e-07;32!UBERON:0002104;5.65e-07;21!UBERON:0001456;5.65e-07;21!UBERON:0010371;5.95e-07;31!UBERON:0000966;7.19e-07;5!UBERON:0005388;7.19e-07;5!UBERON:0001802;7.19e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.19e-14,11;UBERON:0000369,5.45e-14,4;UBERON:0002435,5.45e-14,4;UBERON:0000204,5.45e-14,4;UBERON:0010082,5.45e-14,4;UBERON:0001782,2.52e-11,3;UBERON:0005424,2.52e-11,3;UBERON:0003075,3.55e-11,82;UBERON:0007284,3.55e-11,82;UBERON:0005383,4.09e-11,3;UBERON:0005382,4.09e-11,3;UBERON:0000349,9.10e-11,5;UBERON:0002346,1.90e-10,86;UBERON:0003056,4.08e-10,61;UBERON:0004121,5.14e-10,171;UBERON:0000924,5.14e-10,171;UBERON:0006601,5.14e-10,171;UBERON:0010371,5.37e-10,104;UBERON:0000125,2.56e-09,9;UBERON:0002308,2.56e-09,9;UBERON:0002420,3.18e-09,9;UBERON:0007245,3.18e-09,9;UBERON:0010009,3.18e-09,9;UBERON:0010011,3.18e-09,9;UBERON:0000454,3.18e-09,9;UBERON:0001017,1.10e-08,81;UBERON:0001781,1.36e-08,4;UBERON:0001016,1.97e-08,89;UBERON:0001873,3.25e-08,2;UBERON:0010122,3.25e-08,2;UBERON:0009663,5.19e-08,7;UBERON:0001954,1.13e-07,2;UBERON:0003022,1.13e-07,2;UBERON:0002421,1.13e-07,2;UBERON:0002600,1.13e-07,2;UBERON:0003528,1.13e-07,34;UBERON:0002020,1.13e-07,34;UBERON:0000019,1.88e-07,20;UBERON:0000047,1.88e-07,20;UBERON:0010312,1.88e-07,20;UBERON:0004088,1.88e-07,20;UBERON:0010230,1.88e-07,20;UBERON:0003072,1.88e-07,20;UBERON:0004128,1.88e-07,20;UBERON:0003071,1.88e-07,20;UBERON:0000955,2.33e-07,68;UBERON:0006238,2.33e-07,68;UBERON:0000970,4.75e-07,21;UBERON:0002104,4.75e-07,21;UBERON:0001049,5.13e-07,56;UBERON:0005068,5.13e-07,56;UBERON:0006241,5.13e-07,56;UBERON:0007135,5.13e-07,56;UBERON:0010314,7.93e-07,132|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.618831764800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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-65bp_to_ENST00000449263_5end | |||
|coexpression_cluster_id=C4871 | |||
|description=CAGE_peak_1_at_ENST00000449263_5end | |||
|id=chrX:37765302..37765334,+ | |||
|ontology_enrichment_celltype=CL:0000128!4.85e-08!7;CL:0000126!4.85e-08!7;CL:0000127!4.85e-08!7;CL:0002453!4.85e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.38e-11;3!CL:0000149;1.69e-08;4!CL:0000147;2.07e-08;14!CL:0000128;2.68e-08;7!CL:0000126;2.68e-08;7!CL:0000127;2.68e-08;7!CL:0002322;8.27e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.52e-11,3;CL:0000149,1.36e-08,4;CL:0000147,2.07e-08,14;CL:0000128,3.57e-08,7;CL:0000126,3.57e-08,7;CL:0000127,3.57e-08,7;CL:0002453,3.57e-08,7;CL:0002322,9.81e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.36e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;9.86e-09;4!DOID:1612;9.86e-09;4!DOID:1909;5.89e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.71e-09,4;DOID:1612,7.71e-09,4;DOID:1909,5.50e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!5.43e-34!86;UBERON:0000073!2.83e-31!94;UBERON:0001016!2.83e-31!94;UBERON:0002346!1.77e-30!90;UBERON:0001017!4.24e-30!82;UBERON:0003075!8.95e-29!86;UBERON:0007284!8.95e-29!86;UBERON:0000955!9.47e-27!69;UBERON:0006238!9.47e-27!69;UBERON:0001049!2.55e-26!57;UBERON:0005068!2.55e-26!57;UBERON:0006241!2.55e-26!57;UBERON:0007135!2.55e-26!57;UBERON:0002616!5.35e-25!59;UBERON:0003056!8.37e-24!61;UBERON:0000924!6.89e-23!173;UBERON:0006601!6.89e-23!173;UBERON:0004121!2.02e-21!169;UBERON:0003080!2.82e-19!42;UBERON:0002780!1.91e-18!41;UBERON:0001890!1.91e-18!41;UBERON:0006240!1.91e-18!41;UBERON:0000033!4.66e-18!123;UBERON:0002020!5.69e-18!34;UBERON:0003528!5.69e-18!34;UBERON:0001869!8.93e-18!32;UBERON:0001893!1.77e-17!34;UBERON:0002791!5.51e-17!33;UBERON:0000153!2.36e-16!129;UBERON:0007811!2.36e-16!129;UBERON:0000956!9.87e-12!25;UBERON:0000203!9.87e-12!25;UBERON:0007625!2.03e-10!11;UBERON:0002619!1.42e-09!22;UBERON:0007023!1.61e-09!115;UBERON:0000475!1.12e-08!365;UBERON:0002420!1.61e-08!9;UBERON:0007245!1.61e-08!9;UBERON:0010009!1.61e-08!9;UBERON:0010011!1.61e-08!9;UBERON:0000454!1.61e-08!9;UBERON:0003076!3.27e-08!15;UBERON:0003057!3.27e-08!15;UBERON:0002308!4.76e-08!9;UBERON:0000125!4.76e-08!9;UBERON:0001950!8.08e-08!20;UBERON:0000349!6.90e-07!5;UBERON:0000062!7.40e-07!511 | |||
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|short_description=p1@ENST00000449263 | |||
}} |
Revision as of 11:48, 14 September 2013
Short description: | p1@ENST00000449263 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000449263_5end |
Coexpression cluster: | C4871_Mesenchymal_astrocytoma_tubular_melanoma_Prostate_MCF7_mesenchymal |
Association with transcript: | -65bp_to_ENST00000449263_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.52e-11 | 3 |
visual pigment cell | 1.36e-08 | 4 |
pigment cell | 2.07e-08 | 14 |
oligodendrocyte | 3.57e-08 | 7 |
macroglial cell | 3.57e-08 | 7 |
astrocyte | 3.57e-08 | 7 |
oligodendrocyte precursor cell | 3.57e-08 | 7 |
embryonic stem cell | 9.81e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.71e-09 | 4 |
breast cancer | 7.71e-09 | 4 |
melanoma | 5.50e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.