FFCP PHASE1:Hg19::chrX:47446158..47446174,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-69bp_to_CU674427_5end|coexpression_cluster_id=C609|description=CAGE_peak_3_at_CU674427_5end|id=chrX:47446158..47446174,-|ontology_enrichment_celltype=CL:0000055!8.83e-27!180;CL:0000048!2.18e-17!430;CL:0000723!5.09e-16!436;CL:0000057!6.66e-16!75;CL:0000034!9.22e-15!444;CL:0000680!3.54e-14!57;CL:0000056!3.54e-14!57;CL:0000355!3.54e-14!57;CL:0000187!9.94e-13!54;CL:0002371!5.78e-12!591;CL:0000183!7.40e-12!59;CL:0000192!6.36e-11!42;CL:0000514!6.36e-11!42;CL:0000393!1.09e-10!60;CL:0000211!1.09e-10!60;CL:0000144!3.37e-10!625;CL:0000548!1.61e-09!679;CL:0000004!1.61e-09!679;CL:0000255!1.61e-09!679;CL:0000012!5.10e-09!682;CL:0002320!6.20e-09!365;CL:0000359!4.02e-08!32;CL:0000134!5.71e-08!358;CL:0000219!5.43e-07!390;CL:0002494!9.99e-07!16|ontology_enrichment_celltype_v019=CL:0000134;1.11e-11;55!CL:0002494;1.36e-10;16!CL:0000048;1.10e-09;58!CL:0000499;4.00e-09;28!CL:0000723;4.45e-09;61!CL:0000192;1.96e-08;43!CL:0002334;3.71e-08;12!CL:0000359;4.23e-08;32!CL:0002570;1.54e-07;8!CL:0000034;3.18e-07;69!CL:0000057;7.71e-07;73|ontology_enrichment_celltype_v019_2=CL:0000048,3.56e-25,427;CL:0000723,2.90e-24,433;CL:0000034,4.33e-23,441;CL:0000057,3.34e-19,76;CL:0002320,2.11e-14,361;CL:0000134,3.95e-14,354;CL:0000680,1.04e-12,58;CL:0000056,1.04e-12,58;CL:0000355,1.04e-12,58;CL:0000219,3.02e-11,386;CL:0000192,3.79e-11,43;CL:0000514,3.79e-11,43;CL:0000187,1.07e-10,55;CL:0002494,1.54e-10,16;CL:0000499,2.84e-09,28;CL:0000393,7.65e-09,61;CL:0000211,7.65e-09,61;CL:0002334,2.98e-08,12;CL:0000359,3.35e-08,32;CL:0002570,2.31e-07,8|ontology_enrichment_development_v019=CL:0000514;1.96e-08;43!CL:0000355;3.96e-07;58|ontology_enrichment_disease=DOID:2394!2.29e-07!14|ontology_enrichment_disease_v019=DOID:2394;1.39e-12;14|ontology_enrichment_disease_v019_2=DOID:2394,1.61e-12,14|ontology_enrichment_uberon=UBERON:0000914!1.16e-13!83;UBERON:0002329!1.16e-13!83;UBERON:0003077!1.16e-13!83;UBERON:0003059!1.16e-13!83;UBERON:0007282!1.16e-13!83;UBERON:0009618!1.16e-13!83;UBERON:0007285!1.16e-13!83;UBERON:0001134!3.55e-13!61;UBERON:0002036!3.55e-13!61;UBERON:0003082!3.55e-13!61;UBERON:0002385!3.92e-13!63;UBERON:0001015!3.92e-13!63;UBERON:0000383!3.92e-13!63;UBERON:0004290!1.08e-12!70;UBERON:0000486!4.59e-11!82;UBERON:0002204!1.63e-10!167;UBERON:0005256!3.28e-09!143;UBERON:0002384!5.68e-09!375;UBERON:0000926!7.15e-08!448;UBERON:0004120!7.15e-08!448;UBERON:0006603!7.15e-08!448;UBERON:0001013!1.07e-07!14;UBERON:0004872!6.29e-07!84|ontology_enrichment_uberon_v019=UBERON:0001013;5.42e-12;14!UBERON:0000948;8.05e-08;22!UBERON:0002384;2.36e-07;198!UBERON:0004573;9.20e-07;33!UBERON:0004571;9.20e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.11e-14,371;UBERON:0001013,7.47e-12,14;UBERON:0007524,1.03e-11,73;UBERON:0002329,2.74e-11,71;UBERON:0003059,2.74e-11,71;UBERON:0007282,2.74e-11,71;UBERON:0004290,2.74e-11,71;UBERON:0009618,2.74e-11,71;UBERON:0001134,2.80e-11,62;UBERON:0002036,2.80e-11,62;UBERON:0003082,2.80e-11,62;UBERON:0003077,5.42e-11,72;UBERON:0007285,5.42e-11,72;UBERON:0000486,1.19e-10,83;UBERON:0002385,1.23e-10,64;UBERON:0001015,1.23e-10,64;UBERON:0000383,1.23e-10,64;UBERON:0000926,1.69e-10,315;UBERON:0004120,1.69e-10,315;UBERON:0006603,1.69e-10,315;UBERON:0007503,4.01e-10,78;UBERON:0000948,1.13e-09,24;UBERON:0005498,1.13e-09,24;UBERON:0004140,1.13e-09,24;UBERON:0009881,1.13e-09,24;UBERON:0004141,1.13e-09,24;UBERON:0003084,1.13e-09,24;UBERON:0007005,1.13e-09,24;UBERON:0004139,1.13e-09,24;UBERON:0004291,1.13e-09,24;UBERON:0005256,5.36e-09,122;UBERON:0007100,4.27e-08,27;UBERON:0004872,9.78e-08,83;UBERON:0003104,1.56e-07,160;UBERON:0009142,1.56e-07,160;UBERON:0004573,1.93e-07,33;UBERON:0004571,1.93e-07,33|phase1_expression=3.99692434395225,0.642301571672949,3.80576891059122,0,0.446961094427288,6.97870819280295,5.06599756336621,5.05375898741465,3.65659879479774,0.982935746006035,0,0,0.527533956456907,1.98026164736075,0.994192127183747,2.6893005858071,0.602694528023977,1.46062018077475,0.975865597581014,0.123121058076788,0.816002764977012,0.313454721478088,0.572471974262113,0,0.376627918784408,0.229240217243854,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,1.11957737119962,0.647787332037959,0,0,1.13362783106643,0.242584061187816,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0.47296445977717,1.03423704220986,0,1.35426486594342,1.12945403725563,0.272906150057846,1.79778787556068,2.75475503133812,0.641858054152187,0,0,0.199463657621632,0,2.32167390902867,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,0.949387162322653,0.422510572623884,0.212604299965044,0.838634582033504,0.112328631146495,0.150176892841506,0,0,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0.164437904603676,0.5527000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-69bp_to_CU674427_5end | |||
|coexpression_cluster_id=C609 | |||
|description=CAGE_peak_3_at_CU674427_5end | |||
|id=chrX:47446158..47446174,- | |||
|ontology_enrichment_celltype=CL:0000055!8.83e-27!180;CL:0000048!2.18e-17!430;CL:0000723!5.09e-16!436;CL:0000057!6.66e-16!75;CL:0000034!9.22e-15!444;CL:0000680!3.54e-14!57;CL:0000056!3.54e-14!57;CL:0000355!3.54e-14!57;CL:0000187!9.94e-13!54;CL:0002371!5.78e-12!591;CL:0000183!7.40e-12!59;CL:0000192!6.36e-11!42;CL:0000514!6.36e-11!42;CL:0000393!1.09e-10!60;CL:0000211!1.09e-10!60;CL:0000144!3.37e-10!625;CL:0000548!1.61e-09!679;CL:0000004!1.61e-09!679;CL:0000255!1.61e-09!679;CL:0000012!5.10e-09!682;CL:0002320!6.20e-09!365;CL:0000359!4.02e-08!32;CL:0000134!5.71e-08!358;CL:0000219!5.43e-07!390;CL:0002494!9.99e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.11e-11;55!CL:0002494;1.36e-10;16!CL:0000048;1.10e-09;58!CL:0000499;4.00e-09;28!CL:0000723;4.45e-09;61!CL:0000192;1.96e-08;43!CL:0002334;3.71e-08;12!CL:0000359;4.23e-08;32!CL:0002570;1.54e-07;8!CL:0000034;3.18e-07;69!CL:0000057;7.71e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.56e-25,427;CL:0000723,2.90e-24,433;CL:0000034,4.33e-23,441;CL:0000057,3.34e-19,76;CL:0002320,2.11e-14,361;CL:0000134,3.95e-14,354;CL:0000680,1.04e-12,58;CL:0000056,1.04e-12,58;CL:0000355,1.04e-12,58;CL:0000219,3.02e-11,386;CL:0000192,3.79e-11,43;CL:0000514,3.79e-11,43;CL:0000187,1.07e-10,55;CL:0002494,1.54e-10,16;CL:0000499,2.84e-09,28;CL:0000393,7.65e-09,61;CL:0000211,7.65e-09,61;CL:0002334,2.98e-08,12;CL:0000359,3.35e-08,32;CL:0002570,2.31e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;1.96e-08;43!CL:0000355;3.96e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!2.29e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.39e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.61e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.16e-13!83;UBERON:0002329!1.16e-13!83;UBERON:0003077!1.16e-13!83;UBERON:0003059!1.16e-13!83;UBERON:0007282!1.16e-13!83;UBERON:0009618!1.16e-13!83;UBERON:0007285!1.16e-13!83;UBERON:0001134!3.55e-13!61;UBERON:0002036!3.55e-13!61;UBERON:0003082!3.55e-13!61;UBERON:0002385!3.92e-13!63;UBERON:0001015!3.92e-13!63;UBERON:0000383!3.92e-13!63;UBERON:0004290!1.08e-12!70;UBERON:0000486!4.59e-11!82;UBERON:0002204!1.63e-10!167;UBERON:0005256!3.28e-09!143;UBERON:0002384!5.68e-09!375;UBERON:0000926!7.15e-08!448;UBERON:0004120!7.15e-08!448;UBERON:0006603!7.15e-08!448;UBERON:0001013!1.07e-07!14;UBERON:0004872!6.29e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.42e-12;14!UBERON:0000948;8.05e-08;22!UBERON:0002384;2.36e-07;198!UBERON:0004573;9.20e-07;33!UBERON:0004571;9.20e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.11e-14,371;UBERON:0001013,7.47e-12,14;UBERON:0007524,1.03e-11,73;UBERON:0002329,2.74e-11,71;UBERON:0003059,2.74e-11,71;UBERON:0007282,2.74e-11,71;UBERON:0004290,2.74e-11,71;UBERON:0009618,2.74e-11,71;UBERON:0001134,2.80e-11,62;UBERON:0002036,2.80e-11,62;UBERON:0003082,2.80e-11,62;UBERON:0003077,5.42e-11,72;UBERON:0007285,5.42e-11,72;UBERON:0000486,1.19e-10,83;UBERON:0002385,1.23e-10,64;UBERON:0001015,1.23e-10,64;UBERON:0000383,1.23e-10,64;UBERON:0000926,1.69e-10,315;UBERON:0004120,1.69e-10,315;UBERON:0006603,1.69e-10,315;UBERON:0007503,4.01e-10,78;UBERON:0000948,1.13e-09,24;UBERON:0005498,1.13e-09,24;UBERON:0004140,1.13e-09,24;UBERON:0009881,1.13e-09,24;UBERON:0004141,1.13e-09,24;UBERON:0003084,1.13e-09,24;UBERON:0007005,1.13e-09,24;UBERON:0004139,1.13e-09,24;UBERON:0004291,1.13e-09,24;UBERON:0005256,5.36e-09,122;UBERON:0007100,4.27e-08,27;UBERON:0004872,9.78e-08,83;UBERON:0003104,1.56e-07,160;UBERON:0009142,1.56e-07,160;UBERON:0004573,1.93e-07,33;UBERON:0004571,1.93e-07,33 | |||
|phase1_expression=3.99692434395225,0.642301571672949,3.80576891059122,0,0.446961094427288,6.97870819280295,5.06599756336621,5.05375898741465,3.65659879479774,0.982935746006035,0,0,0.527533956456907,1.98026164736075,0.994192127183747,2.6893005858071,0.602694528023977,1.46062018077475,0.975865597581014,0.123121058076788,0.816002764977012,0.313454721478088,0.572471974262113,0,0.376627918784408,0.229240217243854,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,1.11957737119962,0.647787332037959,0,0,1.13362783106643,0.242584061187816,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0.47296445977717,1.03423704220986,0,1.35426486594342,1.12945403725563,0.272906150057846,1.79778787556068,2.75475503133812,0.641858054152187,0,0,0.199463657621632,0,2.32167390902867,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,0.949387162322653,0.422510572623884,0.212604299965044,0.838634582033504,0.112328631146495,0.150176892841506,0,0,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0.164437904603676,0.552700035571697,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1210257911091,6.64885321586358,1.44575660953827,1.00267582127178,2.17269778441236,0,2.43317435151318,0.567208902984407,0,0.527008714158756,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.446498641420399,0,0.112611480483322,0,0,0.549605231791222,0,0,0,10.933382937297,1.2663051166458,1.32409180813219,1.72101972449288,1.06400514659507,1.68203280042692,0,1.2333377420858,2.48968828319813,1.21239604862719,3.43269996538263,0.151357427644931,0.576175924479999,0,4.68240115245481,0.570471821544449,3.88566569434683,0,0,0.421352420106746,1.02077085627447,0.61417158655884,0.206651562351531,1.18800285728205,2.22540236350701,0,5.03032699271367,0.168336113954066,0.125118519871964,0.554128230968366,1.31693286264251,2.75839016219118,2.25357088359895,3.97012641060074,0.179389635688862,1.92201649936711,2.33125091275518,1.80054657650641,0.412210116953756,1.54584324027377,1.48893485065272,1.18143432568886,1.16924406193438,0.757301322732344,1.19664868234989,0.323292113637624,1.42003837006646,0.201504196455281,1.86516651541536,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,0,0.464367928031979,3.60939740834793,0,0,0,0,0,0.71181185733329,0.404493924480493,0.196221465125346,0.38474715694639,0,0,2.4694440679884,4.41026134156626,0,0,0,0,0,5.66173773985134,0,0,0,0,0.325808305310325,1.03993478527958,0,0.34779121492523,1.29149563659404,0.144366447761074,0,0.380508304469197,0,0.858486162094873,1.23108503043699,0,0.445893486866185,0,0,0.141775097242386,0.268675568108545,0,0.383382679165211,0,0.088048434013226,0,0,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0.514137463516618,0,0,0,0,0.5867062865676,8.53193324001333,7.15312891703765,7.607724773004,1.32969058292435,0,0.771622122786426,0,1.5985330740966,2.14466990487221,3.7983512377401,1.64648067356154,4.56030658011229,4.97548728239564,7.12756685640086,1.20575750823834,0,0.799783929456456,0,0,0,0.958499421966331,0,0,2.60606352001643,3.6985738059069,1.61154866915906,0,0,0,0,0,0,0,0.670065061337395,0,0,2.99161459204025,0,0.736148950314839,2.50085260529839,0.813795071099207,0.831883446123229,0.892144943985809,0.788512075169673,1.63997980989798,1.80567659836631,2.27407504055985,2.0694614258501,0,0.921845842708516,1.99832313276591,0,0.686286847621712,0,0.215714200818617,0.106727557803444,0,0,0.907170879989041,4.46594054073798,4.45039722535381,3.92924132206303,11.0199668359903,3.58195074346692,7.88184213603677,2.96836132889982,0.925258162815933,6.21466038595945,0.98552587216571,0,1.51073491997947,0,0,0.460404944679482,5.62590796006573,1.45672934405374,4.327105693661,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,1.54227252690289,0,0.501689773854853,0,0,0.671624264166535,0,0,0.512900250232778,1.31205858279882,0,0.103041011647722,0.183138929636687,0.495056999523528,0,0,6.42735719376638,0.580024309752732,1.07834031980251,1.07452572308291,0.827019434907183,0.859361958946189,0.580066775656914,0.93749290157711,0.445160178233687,0.165284915360978,0,0,0.2023155617111,0,1.5740617341532,1.3940745403212,1.84820148105653,1.59691809095107,0.869932992075073,3.15051172476664,0,1.116475108079,0,2.2875623270859,0.511795582622668,0,5.72765846266686,2.35484592059769,0.719489830333259,1.37268514868027,1.41374882814824,1.2130948894399,1.58510321173008,0.842516912477962,0,6.33655073041339,1.05650146756755,1.63799893689583,2.96951407102797,11.3008116620243,1.10273068709225,3.3171948762061,0,5.20897980840019,1.31178950409327,0.608731130888112,0.30982349809975,0.845086807596724,0.860468113224309,1.17898849215745,0,3.54761064070598,5.48879851773927,3.62224382255892,1.51789269506286,0,0,0,0,0.0941438007767792,0,1.6847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| |||
|short_description=p3@CU674427 | |||
}} |
Revision as of 12:02, 14 September 2013
Short description: | p3@CU674427 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CU674427_5end |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | -69bp_to_CU674427_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.56e-25 | 427 |
somatic stem cell | 2.90e-24 | 433 |
stem cell | 4.33e-23 | 441 |
fibroblast | 3.34e-19 | 76 |
connective tissue cell | 2.11e-14 | 361 |
mesenchymal cell | 3.95e-14 | 354 |
muscle precursor cell | 1.04e-12 | 58 |
myoblast | 1.04e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.04e-12 | 58 |
motile cell | 3.02e-11 | 386 |
smooth muscle cell | 3.79e-11 | 43 |
smooth muscle myoblast | 3.79e-11 | 43 |
muscle cell | 1.07e-10 | 55 |
cardiocyte | 1.54e-10 | 16 |
stromal cell | 2.84e-09 | 28 |
electrically responsive cell | 7.65e-09 | 61 |
electrically active cell | 7.65e-09 | 61 |
preadipocyte | 2.98e-08 | 12 |
vascular associated smooth muscle cell | 3.35e-08 | 32 |
mesenchymal stem cell of adipose | 2.31e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.61e-12 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.