FFCP PHASE1:Mm9::chr8:124253979..124254064,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57340|HGNC=|MCL_coexpression_id=1|UniProt=Q9ET77|association_with_transcript=-394bp_to_NM_020605_5end|description=CAGE_peak_1_at_Jph3_5end|id=chr8:124253979..124254064,+|ontology_enrichment_celltype=CL:0000540!2.47e-15!33;CL:0000047!2.47e-15!33;CL:0000031!2.47e-15!33;CL:0000404!2.47e-15!33;CL:0000117!2.82e-14!23;CL:0000337!2.82e-14!23;CL:0000221!1.14e-12!44;CL:0000133!1.14e-12!44;CL:0002319!1.38e-12!43;CL:0000393!1.79e-10!39;CL:0000211!1.79e-10!39;CL:0000055!1.80e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.12e-17,23;CL:0000337,3.12e-17,23;CL:0000540,4.64e-17,33;CL:0000047,4.64e-17,33;CL:0000031,4.64e-17,33;CL:0000404,4.64e-17,33;CL:0000221,5.23e-13,44;CL:0000133,5.23e-13,44;CL:0002319,6.87e-13,43;CL:0000393,1.38e-12,39;CL:0000211,1.38e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.31e-31!73;UBERON:0005743!3.31e-31!73;UBERON:0000073!5.86e-31!75;UBERON:0001016!5.86e-31!75;UBERON:0002346!2.43e-27!71;UBERON:0003075!2.43e-27!71;UBERON:0007284!2.43e-27!71;UBERON:0004121!5.82e-26!102;UBERON:0000924!5.82e-26!102;UBERON:0006601!5.82e-26!102;UBERON:0001049!6.43e-25!52;UBERON:0005068!6.43e-25!52;UBERON:0006241!6.43e-25!52;UBERON:0007135!6.43e-25!52;UBERON:0000955!1.19e-23!50;UBERON:0006238!1.19e-23!50;UBERON:0002616!5.03e-23!49;UBERON:0000033!5.50e-23!63;UBERON:0003056!2.20e-20!49;UBERON:0002020!1.85e-19!34;UBERON:0003080!2.64e-19!40;UBERON:0002780!1.49e-18!39;UBERON:0001890!1.49e-18!39;UBERON:0006240!1.49e-18!39;UBERON:0002791!3.35e-16!29;UBERON:0003528!3.35e-16!29;UBERON:0001893!3.35e-16!29;UBERON:0000956!2.01e-11!21;UBERON:0001869!2.01e-11!21;UBERON:0000203!2.01e-11!21;UBERON:0007811!3.17e-11!86;UBERON:0000153!1.51e-09!94;UBERON:0002619!3.09e-09!17;UBERON:0002021!3.41e-08!10;UBERON:0000411!3.41e-08!10;UBERON:0001950!3.41e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.74e-35,73;UBERON:0001016,3.54e-34,75;UBERON:0000073,9.78e-31,54;UBERON:0002346,7.58e-30,64;UBERON:0003075,7.58e-30,64;UBERON:0007284,7.58e-30,64;UBERON:0001049,8.15e-29,52;UBERON:0005068,8.15e-29,52;UBERON:0006241,8.15e-29,52;UBERON:0007135,8.15e-29,52;UBERON:0004121,2.56e-28,95;UBERON:0000924,2.56e-28,95;UBERON:0006601,2.56e-28,95;UBERON:0000955,1.63e-24,47;UBERON:0006238,1.63e-24,47;UBERON:0010371,3.97e-24,73;UBERON:0002616,9.06e-24,46;UBERON:0002020,2.39e-23,34;UBERON:0003080,1.73e-22,40;UBERON:0003056,2.79e-22,49;UBERON:0002780,1.43e-21,39;UBERON:0001890,1.43e-21,39;UBERON:0006240,1.43e-21,39;UBERON:0003528,2.47e-19,29;UBERON:0002791,2.47e-19,29;UBERON:0001893,2.47e-19,29;UBERON:0010314,2.79e-17,92;UBERON:0000956,1.88e-13,21;UBERON:0001869,1.88e-13,21;UBERON:0000203,1.88e-13,21;UBERON:0002619,9.10e-11,17;UBERON:0002021,9.74e-10,10;UBERON:0000411,9.74e-10,10;UBERON:0001950,9.74e-10,10;UBERON:0002420,4.15e-07,8;UBERON:0007245,4.15e-07,8;UBERON:0010009,4.15e-07,8;UBERON:0010011,4.15e-07,8;UBERON:0000454,4.15e-07,8;UBERON:0003076,8.57e-07,12;UBERON:0003057,8.57e-07,12|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,12.5864069423583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,43.9026720065327,40.7323054039465,44.3681982454325,0.338844532069132,0,0,0,0,4.49400165777607,6.14749288514487,25.403955015577,24.436074838036,21.8737959805437,79.1253226798536,62.5057970893066,25.8455586343553,17.6355666673555,36.7687514644008,89.1938636095048,71.1218473134496,74.9599882290468,51.8313110779662,38.4248103130121,42.7148963856543,65.0496387673218,56.8390236131997,57.146544668527,64.2290316332596,52.6775218956681,60.5798198932227,0.151452386666368,1.20914496170857,0,0,0,0,0,0,2.52799956237153,0,0,0,1.26759077799012,0,0,0,0,0,0,1.37020655662872,0,0.742210695324124,0.867426633830679,1.82679286987285,1.15307748628029,3.61734337326294,3.52766121407114,0.125666591329675,0,0,0,0,0,0,0,60.8984057784018,69.955200075694,0,0,0,0,80.7371546391994,102.022634428554,59.4345085493849,121.329375494209,105.610483877427,72.3102395067269,71.2239144867456,0.203678727700633,0,0,1.47309299120532,0.780722657776222,0.919608417733892,2.70093194708024,1.9591626318643,3.74200745332303,2.69038812598185,4.2165776051878,3.88055056108524,0,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0.796137067273973,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,139.422235898016,55.1568722352965,0,0.528901133327089,1.06644125267617,0.232236671860439,1.9330119198314,0.80673409849337,2.44615848229357,0.760902504450237,0.949058123089023,0.988193728344065,0.251335208800269,0.994782360205754,1.36474860983384,1.79763881730844,0,0,0.758671603812327,0.571242563048644,0,0.814605311381257,0.387904974335251,0.280543279561274,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.0459206554342,52.2764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| ||
|EntrezGene=57340 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9ET77 | |||
|association_with_transcript=-394bp_to_NM_020605_5end | |||
|description=CAGE_peak_1_at_Jph3_5end | |||
|id=chr8:124253979..124254064,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.47e-15!33;CL:0000047!2.47e-15!33;CL:0000031!2.47e-15!33;CL:0000404!2.47e-15!33;CL:0000117!2.82e-14!23;CL:0000337!2.82e-14!23;CL:0000221!1.14e-12!44;CL:0000133!1.14e-12!44;CL:0002319!1.38e-12!43;CL:0000393!1.79e-10!39;CL:0000211!1.79e-10!39;CL:0000055!1.80e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.12e-17,23;CL:0000337,3.12e-17,23;CL:0000540,4.64e-17,33;CL:0000047,4.64e-17,33;CL:0000031,4.64e-17,33;CL:0000404,4.64e-17,33;CL:0000221,5.23e-13,44;CL:0000133,5.23e-13,44;CL:0002319,6.87e-13,43;CL:0000393,1.38e-12,39;CL:0000211,1.38e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.31e-31!73;UBERON:0005743!3.31e-31!73;UBERON:0000073!5.86e-31!75;UBERON:0001016!5.86e-31!75;UBERON:0002346!2.43e-27!71;UBERON:0003075!2.43e-27!71;UBERON:0007284!2.43e-27!71;UBERON:0004121!5.82e-26!102;UBERON:0000924!5.82e-26!102;UBERON:0006601!5.82e-26!102;UBERON:0001049!6.43e-25!52;UBERON:0005068!6.43e-25!52;UBERON:0006241!6.43e-25!52;UBERON:0007135!6.43e-25!52;UBERON:0000955!1.19e-23!50;UBERON:0006238!1.19e-23!50;UBERON:0002616!5.03e-23!49;UBERON:0000033!5.50e-23!63;UBERON:0003056!2.20e-20!49;UBERON:0002020!1.85e-19!34;UBERON:0003080!2.64e-19!40;UBERON:0002780!1.49e-18!39;UBERON:0001890!1.49e-18!39;UBERON:0006240!1.49e-18!39;UBERON:0002791!3.35e-16!29;UBERON:0003528!3.35e-16!29;UBERON:0001893!3.35e-16!29;UBERON:0000956!2.01e-11!21;UBERON:0001869!2.01e-11!21;UBERON:0000203!2.01e-11!21;UBERON:0007811!3.17e-11!86;UBERON:0000153!1.51e-09!94;UBERON:0002619!3.09e-09!17;UBERON:0002021!3.41e-08!10;UBERON:0000411!3.41e-08!10;UBERON:0001950!3.41e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.74e-35,73;UBERON:0001016,3.54e-34,75;UBERON:0000073,9.78e-31,54;UBERON:0002346,7.58e-30,64;UBERON:0003075,7.58e-30,64;UBERON:0007284,7.58e-30,64;UBERON:0001049,8.15e-29,52;UBERON:0005068,8.15e-29,52;UBERON:0006241,8.15e-29,52;UBERON:0007135,8.15e-29,52;UBERON:0004121,2.56e-28,95;UBERON:0000924,2.56e-28,95;UBERON:0006601,2.56e-28,95;UBERON:0000955,1.63e-24,47;UBERON:0006238,1.63e-24,47;UBERON:0010371,3.97e-24,73;UBERON:0002616,9.06e-24,46;UBERON:0002020,2.39e-23,34;UBERON:0003080,1.73e-22,40;UBERON:0003056,2.79e-22,49;UBERON:0002780,1.43e-21,39;UBERON:0001890,1.43e-21,39;UBERON:0006240,1.43e-21,39;UBERON:0003528,2.47e-19,29;UBERON:0002791,2.47e-19,29;UBERON:0001893,2.47e-19,29;UBERON:0010314,2.79e-17,92;UBERON:0000956,1.88e-13,21;UBERON:0001869,1.88e-13,21;UBERON:0000203,1.88e-13,21;UBERON:0002619,9.10e-11,17;UBERON:0002021,9.74e-10,10;UBERON:0000411,9.74e-10,10;UBERON:0001950,9.74e-10,10;UBERON:0002420,4.15e-07,8;UBERON:0007245,4.15e-07,8;UBERON:0010009,4.15e-07,8;UBERON:0010011,4.15e-07,8;UBERON:0000454,4.15e-07,8;UBERON:0003076,8.57e-07,12;UBERON:0003057,8.57e-07,12 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,12.5864069423583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,43.9026720065327,40.7323054039465,44.3681982454325,0.338844532069132,0,0,0,0,4.49400165777607,6.14749288514487,25.403955015577,24.436074838036,21.8737959805437,79.1253226798536,62.5057970893066,25.8455586343553,17.6355666673555,36.7687514644008,89.1938636095048,71.1218473134496,74.9599882290468,51.8313110779662,38.4248103130121,42.7148963856543,65.0496387673218,56.8390236131997,57.146544668527,64.2290316332596,52.6775218956681,60.5798198932227,0.151452386666368,1.20914496170857,0,0,0,0,0,0,2.52799956237153,0,0,0,1.26759077799012,0,0,0,0,0,0,1.37020655662872,0,0.742210695324124,0.867426633830679,1.82679286987285,1.15307748628029,3.61734337326294,3.52766121407114,0.125666591329675,0,0,0,0,0,0,0,60.8984057784018,69.955200075694,0,0,0,0,80.7371546391994,102.022634428554,59.4345085493849,121.329375494209,105.610483877427,72.3102395067269,71.2239144867456,0.203678727700633,0,0,1.47309299120532,0.780722657776222,0.919608417733892,2.70093194708024,1.9591626318643,3.74200745332303,2.69038812598185,4.2165776051878,3.88055056108524,0,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0.796137067273973,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,139.422235898016,55.1568722352965,0,0.528901133327089,1.06644125267617,0.232236671860439,1.9330119198314,0.80673409849337,2.44615848229357,0.760902504450237,0.949058123089023,0.988193728344065,0.251335208800269,0.994782360205754,1.36474860983384,1.79763881730844,0,0,0.758671603812327,0.571242563048644,0,0.814605311381257,0.387904974335251,0.280543279561274,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.0459206554342,52.2764122201226,0,0,4.41711507182759,1.95219372148319,5.38558494331997,0.955875191810208,2.45078541490634,3.96307143104365,2.83367491172426,3.50707029493574,5.53402889125133,53.6606598424418,0.141940085208269,0.178065603667255,0,0,0,1.21390318077491,0.302323556964751,0.754420319023592,0.590603785761546,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0.948110273807448,0,0,4.42571487479924,1.44048875225048,1.68166288917581,0.428674070063185,1.24138163549592,3.21063871683727,5.59466670047211,6.39376393140658,0,0,0.882113592219848,0,0,0,0,0,0.291480836629851,72.6867183881198,0,0.412773735926445,0,0,0,0,0,0,0,0,0.474503990371703,2.03319467126849,0.756037385752609,1.46361807210128,1.09181281873089,0.809186078308924,0.578574190077352,0.523511883968059,0.129614973291793,0,1.12738587736838,0.149516546043979,0,2.33341426012857,2.84151611651008,2.19642963138012,1.64300134104056,0.911430693907651,2.51662426621706,0.724752362478018,0.288030006257865,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0,0.386379188064381,0,0,0,0,85.8422800777941,54.778703144354,73.9035212336822,88.1606825423117,80.1546548131652,74.7839958415803,68.8522950236442,70.7004289062026,65.7056493027097,91.6435751800721,3.21740777510948,4.38927360741134,7.34154504742777,4.86213434136588,7.54607385460736,9.37601893095072,7.11189528965169,5.35691148821125,6.73930340142812,5.55933865880354,3.8021894983536,5.28153755881013,5.89941497060259,6.14641463086745,6.43277252302869,6.66811167796303,4.75125736373908,6.75182271622968,5.76920261124629,5.4463600449727,6.17164654293748,6.56660482789549,6.67621331852499,5.23247099876383,4.51725025993587,7.86915853392591,6.0366231048015,5.5244639401947,5.56796866768033,5.05028044491965,5.81311588808453,4.33419722452479,4.09231043169689,4.95797891795091,5.01557188550968,18.7357933453459,5.38042699424439,4.29742108096597,3.82576664137687,2.64709702943419,1.39120701372253 | |||
|short_description=p1@Jph3 | |||
}} |
Revision as of 14:59, 14 September 2013
Short description: | p1@Jph3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Jph3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -394bp_to_NM_020605_5end |
EntrezGene: | Jph3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.12e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.12e-17 | 23 |
neuron | 4.64e-17 | 33 |
neuronal stem cell | 4.64e-17 | 33 |
neuroblast | 4.64e-17 | 33 |
electrically signaling cell | 4.64e-17 | 33 |
ectodermal cell | 5.23e-13 | 44 |
neurectodermal cell | 5.23e-13 | 44 |
neural cell | 6.87e-13 | 43 |
electrically responsive cell | 1.38e-12 | 39 |
electrically active cell | 1.38e-12 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.