FFCP PHASE1:Mm9::chr9:102619607..102619633,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56332|HGNC=|MCL_coexpression_id=224|UniProt=B8JK86|association_with_transcript=0bp_to_ENSMUST00000153911_5end|description=CAGE_peak_5_at_Amotl2_5end|id=chr9:102619607..102619633,+|ontology_enrichment_celltype=CL:0000117!3.96e-12!23;CL:0000337!3.96e-12!23;CL:0000221!4.24e-09!44;CL:0000133!4.24e-09!44;CL:0000393!5.93e-09!39;CL:0000211!5.93e-09!39;CL:0000055!6.81e-09!50;CL:0002319!9.35e-09!43;CL:0000540!2.21e-08!33;CL:0000047!2.21e-08!33;CL:0000031!2.21e-08!33;CL:0000404!2.21e-08!33;CL:0002321!8.77e-08!70;CL:0000220!8.77e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,6.61e-25,23;CL:0000337,6.61e-25,23;CL:0000393,1.59e-18,39;CL:0000211,1.59e-18,39;CL:0002319,1.28e-16,43;CL:0000540,1.29e-16,33;CL:0000047,1.29e-16,33;CL:0000031,1.29e-16,33;CL:0000404,1.29e-16,33;CL:0000221,3.55e-16,44;CL:0000133,3.55e-16,44;CL:0002609,1.47e-14,6;CL:0002321,7.26e-14,70;CL:0000120,1.36e-12,3;CL:0002613,2.95e-12,3;CL:0002608,3.02e-11,3;CL:0002605,2.12e-08,2;CL:0002604,2.12e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.32e-18,29;UBERON:0002791,1.32e-18,29;UBERON:0001893,1.32e-18,29;UBERON:0002020,3.07e-18,34;UBERON:0001954,5.89e-18,7;UBERON:0003022,5.89e-18,7;UBERON:0002421,5.89e-18,7;UBERON:0000349,5.89e-18,7;UBERON:0002600,5.89e-18,7;UBERON:0003056,1.27e-13,49;UBERON:0002780,3.25e-13,39;UBERON:0001890,3.25e-13,39;UBERON:0006240,3.25e-13,39;UBERON:0004121,4.04e-13,95;UBERON:0000924,4.04e-13,95;UBERON:0006601,4.04e-13,95;UBERON:0003080,7.99e-13,40;UBERON:0010371,1.75e-12,73;UBERON:0000369,2.54e-12,5;UBERON:0002435,2.54e-12,5;UBERON:0000204,2.54e-12,5;UBERON:0010082,2.54e-12,5;UBERON:0002420,2.16e-11,8;UBERON:0007245,2.16e-11,8;UBERON:0010009,2.16e-11,8;UBERON:0010011,2.16e-11,8;UBERON:0000454,2.16e-11,8;UBERON:0001017,2.24e-11,73;UBERON:0002346,2.31e-11,64;UBERON:0003075,2.31e-11,64;UBERON:0007284,2.31e-11,64;UBERON:0001049,5.21e-11,52;UBERON:0005068,5.21e-11,52;UBERON:0006241,5.21e-11,52;UBERON:0007135,5.21e-11,52;UBERON:0001016,5.50e-11,75;UBERON:0002616,7.78e-11,46;UBERON:0000955,1.49e-10,47;UBERON:0006238,1.49e-10,47;UBERON:0000073,1.67e-10,54;UBERON:0000956,9.91e-10,21;UBERON:0001869,9.91e-10,21;UBERON:0000203,9.91e-10,21;UBERON:0010314,2.64e-09,92;UBERON:0002619,4.46e-07,17|phase1_expression=0.640595388419176,0,0.909998478779072,0.30246421130683,0.500895729946347,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0.755380907853464,0.405507724878058,0,0,0.436050312760893,3.07560655828261,2.13872888981712,0.55994568650145,0,0,0,0,1.54355661621568,0,1.54701627683233,8.49729135610311,5.81890077199236,7.60597684207415,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.622137673850866,1.21505344498522,1.26194976810829,0.856952953211411,0.883474163806454,1.10241719293459,2.30029130443767,1.83843757322004,0,0.383062014255563,0.307213066512487,5.80299666012853,4.84884511092771,6.77187381723788,0.558365998002762,1.12552522006336,0.45839474333043,0.589257170947335,0.711858403995515,4.10078780815661,0.227178579999552,0,0.289864488701678,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0.35333957451034,0.563373679106722,0,0,7.11066703153331,0.216491041011214,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0.376999773989026,0.247194967734374,0.144599356919912,0,0.485300549842228,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,1.25654352112864,0,0.511430914660661,0.83115217823824,0,0.509196819251581,0,0.252722758433675,0.210441855886474,0.260240885925407,0,0.900310649026746,0.60281927134286,0.748401490664606,1.40925092313335,1.12442069471675,0,0,0.378212160335639,0.351902248327898,0.657587197282725,0,0.696504333044333,0.411564272815887,0,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0.473489471170421,0.393528463494808,0.154267112887378,0,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0,0,0.878200461164203,0.134206418760372,0,1.13195073617213,0.330418782983798,0,0.426576501070468,0.696710015581316,0,0.201683524623343,0,0,0,0.494096864172033,0.502670417600539,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.280543279561274,0.252946148497029,0.147610147979602,0.470996183524124,0.370191491765402,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,0.780534591431195,0.472905432318573,0,0.797273843287435,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0,0,0.321101179975584,0.234423373184406,0.491804836130026,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0.35613120733451,0.651547837414304,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0.35649737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| ||
|EntrezGene=56332 | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|UniProt=B8JK86 | |||
|association_with_transcript=0bp_to_ENSMUST00000153911_5end | |||
|description=CAGE_peak_5_at_Amotl2_5end | |||
|id=chr9:102619607..102619633,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.96e-12!23;CL:0000337!3.96e-12!23;CL:0000221!4.24e-09!44;CL:0000133!4.24e-09!44;CL:0000393!5.93e-09!39;CL:0000211!5.93e-09!39;CL:0000055!6.81e-09!50;CL:0002319!9.35e-09!43;CL:0000540!2.21e-08!33;CL:0000047!2.21e-08!33;CL:0000031!2.21e-08!33;CL:0000404!2.21e-08!33;CL:0002321!8.77e-08!70;CL:0000220!8.77e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.61e-25,23;CL:0000337,6.61e-25,23;CL:0000393,1.59e-18,39;CL:0000211,1.59e-18,39;CL:0002319,1.28e-16,43;CL:0000540,1.29e-16,33;CL:0000047,1.29e-16,33;CL:0000031,1.29e-16,33;CL:0000404,1.29e-16,33;CL:0000221,3.55e-16,44;CL:0000133,3.55e-16,44;CL:0002609,1.47e-14,6;CL:0002321,7.26e-14,70;CL:0000120,1.36e-12,3;CL:0002613,2.95e-12,3;CL:0002608,3.02e-11,3;CL:0002605,2.12e-08,2;CL:0002604,2.12e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.32e-18,29;UBERON:0002791,1.32e-18,29;UBERON:0001893,1.32e-18,29;UBERON:0002020,3.07e-18,34;UBERON:0001954,5.89e-18,7;UBERON:0003022,5.89e-18,7;UBERON:0002421,5.89e-18,7;UBERON:0000349,5.89e-18,7;UBERON:0002600,5.89e-18,7;UBERON:0003056,1.27e-13,49;UBERON:0002780,3.25e-13,39;UBERON:0001890,3.25e-13,39;UBERON:0006240,3.25e-13,39;UBERON:0004121,4.04e-13,95;UBERON:0000924,4.04e-13,95;UBERON:0006601,4.04e-13,95;UBERON:0003080,7.99e-13,40;UBERON:0010371,1.75e-12,73;UBERON:0000369,2.54e-12,5;UBERON:0002435,2.54e-12,5;UBERON:0000204,2.54e-12,5;UBERON:0010082,2.54e-12,5;UBERON:0002420,2.16e-11,8;UBERON:0007245,2.16e-11,8;UBERON:0010009,2.16e-11,8;UBERON:0010011,2.16e-11,8;UBERON:0000454,2.16e-11,8;UBERON:0001017,2.24e-11,73;UBERON:0002346,2.31e-11,64;UBERON:0003075,2.31e-11,64;UBERON:0007284,2.31e-11,64;UBERON:0001049,5.21e-11,52;UBERON:0005068,5.21e-11,52;UBERON:0006241,5.21e-11,52;UBERON:0007135,5.21e-11,52;UBERON:0001016,5.50e-11,75;UBERON:0002616,7.78e-11,46;UBERON:0000955,1.49e-10,47;UBERON:0006238,1.49e-10,47;UBERON:0000073,1.67e-10,54;UBERON:0000956,9.91e-10,21;UBERON:0001869,9.91e-10,21;UBERON:0000203,9.91e-10,21;UBERON:0010314,2.64e-09,92;UBERON:0002619,4.46e-07,17 | |||
|phase1_expression=0.640595388419176,0,0.909998478779072,0.30246421130683,0.500895729946347,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0.755380907853464,0.405507724878058,0,0,0.436050312760893,3.07560655828261,2.13872888981712,0.55994568650145,0,0,0,0,1.54355661621568,0,1.54701627683233,8.49729135610311,5.81890077199236,7.60597684207415,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.622137673850866,1.21505344498522,1.26194976810829,0.856952953211411,0.883474163806454,1.10241719293459,2.30029130443767,1.83843757322004,0,0.383062014255563,0.307213066512487,5.80299666012853,4.84884511092771,6.77187381723788,0.558365998002762,1.12552522006336,0.45839474333043,0.589257170947335,0.711858403995515,4.10078780815661,0.227178579999552,0,0.289864488701678,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0.35333957451034,0.563373679106722,0,0,7.11066703153331,0.216491041011214,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0.376999773989026,0.247194967734374,0.144599356919912,0,0.485300549842228,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,1.25654352112864,0,0.511430914660661,0.83115217823824,0,0.509196819251581,0,0.252722758433675,0.210441855886474,0.260240885925407,0,0.900310649026746,0.60281927134286,0.748401490664606,1.40925092313335,1.12442069471675,0,0,0.378212160335639,0.351902248327898,0.657587197282725,0,0.696504333044333,0.411564272815887,0,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0.473489471170421,0.393528463494808,0.154267112887378,0,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0,0,0.878200461164203,0.134206418760372,0,1.13195073617213,0.330418782983798,0,0.426576501070468,0.696710015581316,0,0.201683524623343,0,0,0,0.494096864172033,0.502670417600539,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.280543279561274,0.252946148497029,0.147610147979602,0.470996183524124,0.370191491765402,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,0.780534591431195,0.472905432318573,0,0.797273843287435,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0,0,0.321101179975584,0.234423373184406,0.491804836130026,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0.35613120733451,0.651547837414304,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0.356497378384721,0.948110273807448,0,0,0,0,0.129358683782755,0,0,0.535106452806212,0.164549020602121,0.608929898229199,0,0.21183207086382,0,0.32977250588296,0.968786560175433,1.14594557363496,1.07435109602823,0.492422699235184,0,0.18542530201051,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.809186078308924,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.337912250981556,1.05621514781179,0.651021924219751,0.314578033277133,0,0,0,0.202725215290164,0,0.389762468933385,0.358053391334963,0,0.360586348559907,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0.221985953374065,0.358855426437903,0.503653849092235,0,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,0,0.44449345560323,0,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.37456602987953,0.320125762024346,0.34461281373368,0,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0,0.532427418478012,0.715308569841963,0.290692833264657,0.376437521661322,0.592302255241736,0.365855945745545,0.789209134313529,0.135804113845862,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0,0.749431733813838,0.233931608445408,0.429742108096597,0.57386499620653,0.661774257358546,0 | |||
|short_description=p5@Amotl2 | |||
}} |
Revision as of 16:36, 14 September 2013
Short description: | p5@Amotl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Amotl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | 0bp_to_ENSMUST00000153911_5end |
EntrezGene: | Amotl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.61e-25 | 23 |
neuroblast (sensu Vertebrata) | 6.61e-25 | 23 |
electrically responsive cell | 1.59e-18 | 39 |
electrically active cell | 1.59e-18 | 39 |
neural cell | 1.28e-16 | 43 |
neuron | 1.29e-16 | 33 |
neuronal stem cell | 1.29e-16 | 33 |
neuroblast | 1.29e-16 | 33 |
electrically signaling cell | 1.29e-16 | 33 |
ectodermal cell | 3.55e-16 | 44 |
neurectodermal cell | 3.55e-16 | 44 |
neuron of cerebral cortex | 1.47e-14 | 6 |
embryonic cell | 7.26e-14 | 70 |
granule cell | 1.36e-12 | 3 |
striatum neuron | 2.95e-12 | 3 |
hippocampal neuron | 3.02e-11 | 3 |
astrocyte of the cerebral cortex | 2.12e-08 | 2 |
astrocyte of the hippocampus | 2.12e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.