FFCP PHASE1:Mm9::chrX:7500068..7500101,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=980|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:7500068..7500101,+|id=chrX:7500068..7500101,+|ontology_enrichment_celltype=CL:0002319!5.98e-14!43;CL:0000221!2.61e-13!44;CL:0000133!2.61e-13!44;CL:0000117!9.06e-13!23;CL:0000337!9.06e-13!23;CL:0000540!1.55e-12!33;CL:0000047!1.55e-12!33;CL:0000031!1.55e-12!33;CL:0000404!1.55e-12!33;CL:0000055!4.38e-10!50;CL:0000393!6.45e-09!39;CL:0000211!6.45e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-15,23;CL:0000337,3.28e-15,23;CL:0002319,1.61e-10,43;CL:0000540,2.30e-10,33;CL:0000047,2.30e-10,33;CL:0000031,2.30e-10,33;CL:0000404,2.30e-10,33;CL:0000221,3.75e-10,44;CL:0000133,3.75e-10,44;CL:0000393,4.67e-08,39;CL:0000211,4.67e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.94e-31!73;UBERON:0005743!2.94e-31!73;UBERON:0000073!3.16e-31!75;UBERON:0001016!3.16e-31!75;UBERON:0004121!4.63e-30!102;UBERON:0000924!4.63e-30!102;UBERON:0006601!4.63e-30!102;UBERON:0002346!4.76e-30!71;UBERON:0003075!4.76e-30!71;UBERON:0007284!4.76e-30!71;UBERON:0001049!3.99e-23!52;UBERON:0005068!3.99e-23!52;UBERON:0006241!3.99e-23!52;UBERON:0007135!3.99e-23!52;UBERON:0000955!3.90e-21!50;UBERON:0006238!3.90e-21!50;UBERON:0002616!1.20e-20!49;UBERON:0000033!3.38e-19!63;UBERON:0003056!5.43e-18!49;UBERON:0003080!2.48e-17!40;UBERON:0002780!8.84e-17!39;UBERON:0001890!8.84e-17!39;UBERON:0006240!8.84e-17!39;UBERON:0002020!1.91e-14!34;UBERON:0002791!5.53e-11!29;UBERON:0003528!5.53e-11!29;UBERON:0001893!5.53e-11!29;UBERON:0007811!1.92e-09!86;UBERON:0000153!1.26e-07!94;UBERON:0001894!4.28e-07!10;UBERON:0006222!4.28e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.38e-29,73;UBERON:0001016,5.44e-28,75;UBERON:0000073,3.13e-26,54;UBERON:0001049,4.98e-24,52;UBERON:0005068,4.98e-24,52;UBERON:0006241,4.98e-24,52;UBERON:0007135,4.98e-24,52;UBERON:0004121,1.12e-20,95;UBERON:0000924,1.12e-20,95;UBERON:0006601,1.12e-20,95;UBERON:0002346,3.30e-20,64;UBERON:0003075,3.30e-20,64;UBERON:0007284,3.30e-20,64;UBERON:0010314,1.15e-17,92;UBERON:0002616,3.90e-17,46;UBERON:0000955,1.32e-16,47;UBERON:0006238,1.32e-16,47;UBERON:0010371,1.64e-16,73;UBERON:0003080,5.53e-14,40;UBERON:0002780,3.63e-13,39;UBERON:0001890,3.63e-13,39;UBERON:0006240,3.63e-13,39;UBERON:0002020,1.29e-12,34;UBERON:0003076,9.42e-12,12;UBERON:0003057,9.42e-12,12;UBERON:0003056,2.98e-11,49;UBERON:0002240,1.93e-09,6;UBERON:0005174,1.93e-09,6;UBERON:0001137,1.93e-09,6;UBERON:0002420,1.67e-08,8;UBERON:0007245,1.67e-08,8;UBERON:0010009,1.67e-08,8;UBERON:0010011,1.67e-08,8;UBERON:0000454,1.67e-08,8;UBERON:0001948,3.42e-08,5;UBERON:0002315,3.42e-08,5;UBERON:0003528,9.45e-08,29;UBERON:0002791,9.45e-08,29;UBERON:0001893,9.45e-08,29;UBERON:0002369,1.53e-07,7;UBERON:0006858,1.53e-07,7;UBERON:0001894,3.41e-07,10;UBERON:0006222,3.41e-07,10|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0.279972843250725,2.87505128729943,0,0,0,0,0,0,3.23706337375356,1.05798195854407,3.1691570175309,0,0,0,0,0,4.19440154725767,11.9107674649682,1.03689612308478,0.405017814995072,0.420649922702764,3.99911378165325,1.98781686856452,0.734944795289724,0.479227355091182,0,2.20231761998777,1.53224805702225,3.22573719838111,1.71452174049252,2.19570344645783,0.52091337055676,2.51264699101243,2.25105044012672,3.66715794664344,2.06240009831567,2.84743361598206,4.47358669980721,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,3.71105347662062,1.90833859442749,3.34912026143355,1.84492397804847,1.20578112442098,5.17390311397101,0.376999773989026,0,0,0,0,0,0,0,2.04946557908083,11.7290155815535,0,0,0,0,1.49790639404823,1.83000241127451,2.1361239859187,1.39059456153821,1.53429274398198,1.24672826735736,2.75810147215188,0,0,0,0.631325567659422,0.390361328888111,0,0.360124259610698,0.150704817835715,0.748401490664606,1.0249097622788,0.843315521037559,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,3.2929475961371,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,1.59165177632921,0.38992817423824,0,0,0.398282546508734,0.758671603812327,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.69586879162067,0,0,0.631016438832513,0.390438744296638,1.29254038639679,0,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,1.18120757152309,0,0.258428293168221,1.09060118843252,0.712994756769443,0.316036757935816,0,0,3.40439605753788,0.36012218806262,1.81102157295856,0.643011105094777,0.532020700926821,3.92411398724555,5.59466670047211,18.5723618959906,0,0,0.220528398054962,0,0,0,0,0,0.582961673259701,2.41052892613663,0,0,0,0,0,0,0,0,0,0.954670618015114,0.790839983952838,0,0,0,0,0.134864346384821,0.495920734352016,0,0.518459893167171,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,1.67774951081137,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99787358036658,1.34570784914214,2.01461539636894,0,0,0,0,0,0,0.460325236507177,3.43737308063638,0.859265911718438,1.37016503954128,0.755393897389701,0,2.70192721934532,1.35942722695261,0.51776031175182,0,2.79317411380722,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.34461281373368,0,0.115884325944855,0,0.824171801606613,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0,0.964533054905707,2.24829520144151,0.701794825336225,4.29742108096597,2.29545998482612,0.661774257358546,0|short_description=p@chrX:7500068..7500101,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=980 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:7500068..7500101,+ | |||
|id=chrX:7500068..7500101,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.98e-14!43;CL:0000221!2.61e-13!44;CL:0000133!2.61e-13!44;CL:0000117!9.06e-13!23;CL:0000337!9.06e-13!23;CL:0000540!1.55e-12!33;CL:0000047!1.55e-12!33;CL:0000031!1.55e-12!33;CL:0000404!1.55e-12!33;CL:0000055!4.38e-10!50;CL:0000393!6.45e-09!39;CL:0000211!6.45e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-15,23;CL:0000337,3.28e-15,23;CL:0002319,1.61e-10,43;CL:0000540,2.30e-10,33;CL:0000047,2.30e-10,33;CL:0000031,2.30e-10,33;CL:0000404,2.30e-10,33;CL:0000221,3.75e-10,44;CL:0000133,3.75e-10,44;CL:0000393,4.67e-08,39;CL:0000211,4.67e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.94e-31!73;UBERON:0005743!2.94e-31!73;UBERON:0000073!3.16e-31!75;UBERON:0001016!3.16e-31!75;UBERON:0004121!4.63e-30!102;UBERON:0000924!4.63e-30!102;UBERON:0006601!4.63e-30!102;UBERON:0002346!4.76e-30!71;UBERON:0003075!4.76e-30!71;UBERON:0007284!4.76e-30!71;UBERON:0001049!3.99e-23!52;UBERON:0005068!3.99e-23!52;UBERON:0006241!3.99e-23!52;UBERON:0007135!3.99e-23!52;UBERON:0000955!3.90e-21!50;UBERON:0006238!3.90e-21!50;UBERON:0002616!1.20e-20!49;UBERON:0000033!3.38e-19!63;UBERON:0003056!5.43e-18!49;UBERON:0003080!2.48e-17!40;UBERON:0002780!8.84e-17!39;UBERON:0001890!8.84e-17!39;UBERON:0006240!8.84e-17!39;UBERON:0002020!1.91e-14!34;UBERON:0002791!5.53e-11!29;UBERON:0003528!5.53e-11!29;UBERON:0001893!5.53e-11!29;UBERON:0007811!1.92e-09!86;UBERON:0000153!1.26e-07!94;UBERON:0001894!4.28e-07!10;UBERON:0006222!4.28e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.38e-29,73;UBERON:0001016,5.44e-28,75;UBERON:0000073,3.13e-26,54;UBERON:0001049,4.98e-24,52;UBERON:0005068,4.98e-24,52;UBERON:0006241,4.98e-24,52;UBERON:0007135,4.98e-24,52;UBERON:0004121,1.12e-20,95;UBERON:0000924,1.12e-20,95;UBERON:0006601,1.12e-20,95;UBERON:0002346,3.30e-20,64;UBERON:0003075,3.30e-20,64;UBERON:0007284,3.30e-20,64;UBERON:0010314,1.15e-17,92;UBERON:0002616,3.90e-17,46;UBERON:0000955,1.32e-16,47;UBERON:0006238,1.32e-16,47;UBERON:0010371,1.64e-16,73;UBERON:0003080,5.53e-14,40;UBERON:0002780,3.63e-13,39;UBERON:0001890,3.63e-13,39;UBERON:0006240,3.63e-13,39;UBERON:0002020,1.29e-12,34;UBERON:0003076,9.42e-12,12;UBERON:0003057,9.42e-12,12;UBERON:0003056,2.98e-11,49;UBERON:0002240,1.93e-09,6;UBERON:0005174,1.93e-09,6;UBERON:0001137,1.93e-09,6;UBERON:0002420,1.67e-08,8;UBERON:0007245,1.67e-08,8;UBERON:0010009,1.67e-08,8;UBERON:0010011,1.67e-08,8;UBERON:0000454,1.67e-08,8;UBERON:0001948,3.42e-08,5;UBERON:0002315,3.42e-08,5;UBERON:0003528,9.45e-08,29;UBERON:0002791,9.45e-08,29;UBERON:0001893,9.45e-08,29;UBERON:0002369,1.53e-07,7;UBERON:0006858,1.53e-07,7;UBERON:0001894,3.41e-07,10;UBERON:0006222,3.41e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0.279972843250725,2.87505128729943,0,0,0,0,0,0,3.23706337375356,1.05798195854407,3.1691570175309,0,0,0,0,0,4.19440154725767,11.9107674649682,1.03689612308478,0.405017814995072,0.420649922702764,3.99911378165325,1.98781686856452,0.734944795289724,0.479227355091182,0,2.20231761998777,1.53224805702225,3.22573719838111,1.71452174049252,2.19570344645783,0.52091337055676,2.51264699101243,2.25105044012672,3.66715794664344,2.06240009831567,2.84743361598206,4.47358669980721,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,3.71105347662062,1.90833859442749,3.34912026143355,1.84492397804847,1.20578112442098,5.17390311397101,0.376999773989026,0,0,0,0,0,0,0,2.04946557908083,11.7290155815535,0,0,0,0,1.49790639404823,1.83000241127451,2.1361239859187,1.39059456153821,1.53429274398198,1.24672826735736,2.75810147215188,0,0,0,0.631325567659422,0.390361328888111,0,0.360124259610698,0.150704817835715,0.748401490664606,1.0249097622788,0.843315521037559,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,3.2929475961371,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,1.59165177632921,0.38992817423824,0,0,0.398282546508734,0.758671603812327,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.69586879162067,0,0,0.631016438832513,0.390438744296638,1.29254038639679,0,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,1.18120757152309,0,0.258428293168221,1.09060118843252,0.712994756769443,0.316036757935816,0,0,3.40439605753788,0.36012218806262,1.81102157295856,0.643011105094777,0.532020700926821,3.92411398724555,5.59466670047211,18.5723618959906,0,0,0.220528398054962,0,0,0,0,0,0.582961673259701,2.41052892613663,0,0,0,0,0,0,0,0,0,0.954670618015114,0.790839983952838,0,0,0,0,0.134864346384821,0.495920734352016,0,0.518459893167171,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,1.67774951081137,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99787358036658,1.34570784914214,2.01461539636894,0,0,0,0,0,0,0.460325236507177,3.43737308063638,0.859265911718438,1.37016503954128,0.755393897389701,0,2.70192721934532,1.35942722695261,0.51776031175182,0,2.79317411380722,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.34461281373368,0,0.115884325944855,0,0.824171801606613,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0,0.964533054905707,2.24829520144151,0.701794825336225,4.29742108096597,2.29545998482612,0.661774257358546,0 | |||
|short_description=p@chrX:7500068..7500101,+ | |||
}} |
Revision as of 20:10, 14 September 2013
Short description: | p@chrX:7500068..7500101, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:7500068..7500101, + |
Coexpression cluster: | MCL_coexpression_mm9:980 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.28e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.28e-15 | 23 |
neural cell | 1.61e-10 | 43 |
neuron | 2.30e-10 | 33 |
neuronal stem cell | 2.30e-10 | 33 |
neuroblast | 2.30e-10 | 33 |
electrically signaling cell | 2.30e-10 | 33 |
ectodermal cell | 3.75e-10 | 44 |
neurectodermal cell | 3.75e-10 | 44 |
electrically responsive cell | 4.67e-08 | 39 |
electrically active cell | 4.67e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.