FFCP PHASE1:Hg19::chr1:206858328..206858339,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9261 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6887 | |||
|TSSclassifier=strong | |||
|UniProt=P49137 | |||
|association_with_transcript=-25bp_to_NM_004759,NM_032960_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_MAPKAPK2_5end | |||
|id=chr1:206858328..206858339,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.98e-23!42;CL:0000860!2.37e-21!45;CL:0000738!1.39e-17!140;CL:0000766!7.23e-17!76;CL:0000988!1.65e-14!182;CL:0002087!3.84e-14!119;CL:0000557!7.46e-14!71;CL:0002194!2.53e-13!63;CL:0000576!2.53e-13!63;CL:0000040!2.53e-13!63;CL:0000559!2.53e-13!63;CL:0002009!3.70e-13!65;CL:0000037!4.34e-13!172;CL:0000566!4.34e-13!172;CL:0002031!4.82e-13!124;CL:0000839!2.08e-12!70;CL:0002032!2.11e-11!165;CL:0000837!2.11e-11!165;CL:0000763!6.47e-10!112;CL:0000049!6.47e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.18e-36;33!CL:0002057;7.18e-36;33!CL:0000473;4.64e-26;39!CL:0000234;4.64e-26;39!CL:0000576;1.00e-23;48!CL:0000766;5.76e-21;69!CL:0000094;8.74e-12;8!CL:0002087;2.18e-11;104!CL:0000081;3.48e-10;11!CL:0000738;4.36e-09;136!CL:0000763;4.53e-09;100!CL:0000988;2.32e-07;177!CL:0000791;2.91e-07;18!CL:0000789;2.91e-07;18!CL:0002419;2.91e-07;18!CL:0000784;6.45e-07;3!CL:0000767;7.54e-07;3!CL:0000084;8.14e-07;25!CL:0000624;9.83e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.15e-47,42;CL:0002057,3.15e-47,42;CL:0000738,1.13e-43,136;CL:0000766,8.54e-43,72;CL:0000473,2.87e-42,48;CL:0000234,2.87e-42,48;CL:0000988,1.19e-36,177;CL:0000557,7.66e-35,67;CL:0000037,8.99e-35,168;CL:0002009,5.79e-34,61;CL:0002087,1.74e-33,115;CL:0002194,1.81e-33,59;CL:0000576,1.81e-33,59;CL:0000040,1.81e-33,59;CL:0000559,1.81e-33,59;CL:0002031,1.27e-32,120;CL:0000839,6.49e-32,66;CL:0002032,1.40e-30,161;CL:0000837,1.40e-30,161;CL:0000763,2.79e-27,108;CL:0000049,2.79e-27,108;CL:0000094,8.82e-12,8;CL:0000134,3.23e-11,354;CL:0002320,3.66e-11,361;CL:0000081,3.20e-10,11;CL:0002393,3.78e-09,9;CL:0002397,3.78e-09,9;CL:0000219,7.10e-09,386;CL:0000034,4.30e-08,441;CL:0000048,1.40e-07,427;CL:0000791,3.01e-07,18;CL:0000789,3.01e-07,18;CL:0002420,3.01e-07,18;CL:0002419,3.01e-07,18;CL:0000790,3.01e-07,18;CL:0000723,3.36e-07,433;CL:0000784,6.47e-07,3;CL:0000624,7.73e-07,6;CL:0000767,7.93e-07,3;CL:0000084,8.16e-07,25;CL:0000827,8.16e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-34;42!CL:0000049;2.72e-09;108!CL:0000790;2.91e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.98e-14!112;UBERON:0002390!3.19e-13!102;UBERON:0003061!3.19e-13!102;UBERON:0002371!2.94e-12!80;UBERON:0003081!2.02e-11!216;UBERON:0001474!9.95e-11!86;UBERON:0002405!6.98e-10!115;UBERON:0004765!3.69e-09!101;UBERON:0001434!3.69e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.18e-32,76;UBERON:0001474,7.48e-29,82;UBERON:0002390,1.59e-28,98;UBERON:0003061,1.59e-28,98;UBERON:0002405,6.87e-28,93;UBERON:0002193,5.55e-27,108;UBERON:0004765,4.53e-25,90;UBERON:0001434,3.23e-21,100;UBERON:0003081,1.15e-17,203;UBERON:0002204,1.63e-11,167;UBERON:0002384,2.67e-10,371;UBERON:0000926,3.37e-08,315;UBERON:0004120,3.37e-08,315;UBERON:0006603,3.37e-08,315 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,2.00146596706261,0,0.872338524100369,0,0,0.522371256399677,0.737201809504527,2.09340350391728,0.436882744260345,1.05506791291381,0.123766352960047,0.662794751455832,0.672325146451775,1.80808358407193,0,0.975865597581014,0.369363174230364,1.02000345622126,0,0.286235987131057,0.136874425072884,0.376627918784408,0.152826811495903,0.164201178899891,0.0787107813136792,9.4407426443737,5.75744097145819,9.13415127564848,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,1.17440175733939,9.97191735357379,3.60980005446255,4.34021741431704,0,0,0.257575567634187,1.30858414901608,3.02300754951048,1.21292030593908,3.25400651667958,3.28934310417461,4.02618282163635,2.01384674625505,3.07392847834921,2.36482229888585,3.10271112662957,3.87290810150296,10.8341189275473,3.01187743268168,1.91034305040492,1.57306439111559,4.28517449319264,3.85114832491312,3.19668562899521,1.31940520074686,4.58766412529753,2.55734850319616,2.32167390902867,1.13477044938228,4.35975574296902,2.26123798731069,3.65038042894141,1.73751075764093,1.81619850790011,1.84138817993782,2.53169909952708,0.845021145247767,2.55125159958052,0.628975936525128,0.44931452458598,0.600707571366025,0.964353520182481,3.42015292489498,2.78483348078726,1.46131323011707,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0.574752439954483,1.32208974556972,0,0,0,1.14681968437569,6.60856642895129,7.28661131875997,1.58030450865046,2.9506465517075,2.35806457649499,3.08402248499264,0.167186495390678,0.977766799900771,0.473447805734733,0,0.222820913770347,1.17842362989935,0.664601683750863,1.62482318259009,0.512365278902701,0.260118695119756,0.164437904603676,0,0,0,0.535081656179426,0,0.226618685395132,1.91610246800961,1.03088233644789,1.01207876807801,1.27426165729639,0.651083453856419,0,0.752875595388864,0.127986611154418,1.24930726552346,0.947109008176067,0,3.83052812126992,2.13952156626806,4.63438092424957,0,0,0.255725123687061,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0.175669571386252,1.63723844372141,0,0,0.324547393654683,0.174129737299267,0.132957960518865,9.77811559651902,8.00792875092179,20.4301625731261,2.38514888840046,0,1.38856200643038,0.56530794192401,0.419499436209906,0.550236083880135,0.626984899610432,0.516833518338658,0.71153252537342,0,1.61131726843659,0,1.70843440283719,0.735326160691737,1.62028389576352,0.267899184852239,0.44905874525234,0.563057402416611,0,0,0.732806975721629,34.2629085333764,42.6558290563158,0,0,0.25326102332916,0.264818361626438,0,0.354668382198357,1.12135520028461,0,0.98667019366864,0,0.404132016209064,0.490385709340376,0.302714855289863,0.576175924479999,0,0.312160076830321,0,0.747243402759005,0.352303495931295,0,0.421352420106746,0,0,0.413303124703062,0,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.751190294532984,0.453728732640084,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.618315175430633,0.515281080091258,0.18611685633159,0.506328996723799,0.68205903612839,0.504867548488229,0,0.80823028409406,0,0.604512589365842,0.508681776931463,0,0.272746120590835,0.286804595389004,0.365921118388786,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0.36497735907583,1.56449532329816,0.643240938192885,0,0.928735856063958,0,0.354920400119532,0.168584690078102,0,0.330881918197182,0.435758888184812,0,0,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0,0.368965315629341,0,0.219500570817251,0,0.402115889646523,0.277765335475589,1.62904152655162,0,0,1.04337364477569,0.939269553886573,0.433099343283221,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0,0.445893486866185,0,0.671928512795438,0.708875486211932,0.0895585227028483,0,0.383382679165211,0,0.264145302039678,0.829312462163088,1.29707958075265,1.38866676769018,0.571481048629521,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0.224262168690721,0.87192013766656,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0,0,0,0,1.30294473717494,1.06617584622764,0,0.301439377059586,0,0.399891964728228,0,2.51128545716063,0,0.479249710983165,0,0,0,0,0.358121926479791,0.112085143993527,4.3346767244424,2.58753089831421,4.49200626979119,0,0,0.773288812777695,0.167516265334349,0,3.74503511973591,0,7.0450637284126,0.24538298343828,0,0,0.831883446123229,0.356857977594324,0.473107245101804,0.234282829985426,0.601892199455438,0,0,0,1.10621501125022,0.173767228936166,0.979005787313703,2.40200396667599,1.24060815673732,0.862856803274467,3.62873696531711,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.464841513839837,0.604297247958111,0.200506470303285,0.184161977871793,0.114814448164607,0.364182336013434,0.655622074797121,0,0,0.784349769176855,0,0,1.13733384070897,0.680374821106063,0.647747748306418,0,0,1.00337954770971,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.309123034943167,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.15350367472613,0.827019434907183,0.214840489736547,0.145016693914229,0.340906509664404,0.445160178233687,0.330569830721956,0.384380134730212,0.255225424989168,0.6069466851333,0,0.62962469366128,1.3940745403212,0.308033580176089,0.532306030317022,0,0.9266210955196,0.429374660225974,0.372158369359667,0,0.190630193923825,0.511795582622668,0.855877976067841,0.636406495851874,0,0,0,0.117812402345686,0.606547444719948,0,0,0.48763373908959,0.731140468893853,0,0.136499911407986,0.424216295861138,2.26016233240486,0,0,0.438450885253763,1.73632660280006,0,0.405820753925408,0.6196469961995,0.563391205064483,0.573645408816206,0.196498082026242,0,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.282431402330337,0.86101074534246,0,0.443430153536676,0.689170200620878,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0.213648142254946,0,0.245040215981032,0,0.432807638929335,0.0711418433484141,0,0.59873811429845,0.766021480529467,0.635020748171649,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0,0,0.403599414382095,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,1.4098700508785,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0.71623345421307,0,0,0.994147647766298,0,0.111308705022906,0.16480387422676,0,0.398495976502139,0.552567831062295,0,0.511343412510774,0.123084805461069,0.311039587661807,0.269605053441981,0,0.511572370226872,0,0,0,0,0.278304294485554,0,0.260427761085233,0.524759999977174,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0,0.10893846351899,0.139423744278603,0.153900517007594,0.341826167541004,0.46112780877612,0,0.108647371922008,0.638002319463839,0.824378340616761,0,0,0.627921025580099,0.332423363800313,0,0.588187602953219,0,0.189753732724185,0,0.210998064528027,0.163232808159148,0.848118428603645,0,0,0.265372693510018,0,1.48260564340311,1.48276726735803,0.730953646538188,0.134802265961354,0.802577647298789,0,0,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0.568679216656392,0,0.103688191397247,1.32930774541437,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.489961987071888,0.261177619741208,0.34945333648406,0,0.387025325156341,0.146178634172371,0,0,0,0.677942222341597,0.274083849293502,0,0,0,0.320635281006135,0.85381197895741,0.39961921916426,0.288180834308212,0,0.343189995723929,0.576219191952599,0.49701014226173,0,0.407712618220842,0,0.101998217636322,0,0.600420288709789,0.136905378891993,1.27746588066972,0,1.31443677139657,0.558564802544508,0.916641696046735,2.15361907373044,2.1964690054889,3.86303443322914,4.68660060627932,2.48578848200887,0.360299883542404,0,0.236349546921671,0.164831716762333,0.0674035438541849,0.196854963029498,0.592713324460491,0.795229689809303,0.136203406111576,0,0,0,2.4747128070665,0,0,0.335434687599266,0.472834243795189,0.314727528809989,0.950403028674658,0,0.191915197319445,2.85878130549347,0.662091970365432,0.25426853765475,0,0.864221491201268,0,0,0.328370082997356,0.340776043570843,0.339936274560377,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0.704815022316672,0.961086713109252,0.314408610199332,1.65695622138878,1.48849806543585,1.58089305518355,0.365377795142688,0,0,0.2506898940227,0.306345576763462,0,0.314108192500469,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.124192805882767,0.138348634936231,0.874862855734746,0,0.285465333544967,0.235265819698172,0,0.144921028610825,0.149254802886874,0.934853239388898,0.554805861502613,0.757612021100357,0.754703705257725,0,0.457680136793847,0.756154618816195,0.621748802331122,0.295710299979268,0.318593534327405,0,0,0,0,0.521745061811734,0.450772826991655,0.761610424337591,0.406870733204662,0.545545977607678,0.322231671127465,0.928067519756987,0.796191777397232,0.400027764663154,0.343395705182793,0,3.78554694685953,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.690860683462397,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0,0.737318726261158,0.422624246717254,2.59983614611409,0.746842107858986,0,0.567515953566836,0.552317850755522,0.139879507719444,0.622077260032973,0,0.107824811396682,0.629063767423586,0,0,0,0.123935764259002,0.558644917973244,0.636008701306837,1.65609664502632,0,0.705351887381368,0.3062454773532,0.192687675289379,0,0,0,0,0.0691572524642179,0.484426936895553,0,0.0981477185010256,0.235939446695481,0,1.15525666150338,0,0,0.397832444232549,0.150420656698515,0.40341013740704,0,0.261906694481422,0,0.591424344868181,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0.511049710558381,1.60710550763486,1.3451348888753,0,0,0.266107110487916,0.230467975111559,1.02892805662451,0.203909198930495,0.0657727735628491,0.118193840883968,0.111231401892069,0.549451649953598,0,0.280272163313789,0.913158720509496,0.215927591218621,0,0.357382720883282,0,0,0.173858272302579,0,0.414432328326074,0.3414369541879,0.691259661814092,0,0.473328002922261,0.255640214277473,0.423387050190929,0,0.31020638566432,0,0.223710863595585,0.098150233615243,0.121917924982269,1.29485767437579,0.615976841137482,1.1598144313382,0.485710993059139,0.233939463462106,0.795803100645473,0,0,0,0.301925687133347,0.308696632431779,0.655678681511872,0,0,0.707029641304878,0,0.297046400327086,0.4226557275834,0.679708458751268,0.751871343838829,0.709036767709349,0,0.357107877211315,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0.630832124175395,0,0.886889507080059,0.713921808193872,0,0.36757959813938,0,6.21385325389563,1.60778478093707,0,0.20686599172379,0.639701945702943,0.23806443146374,0.129177819672012,0.186224142887574,0,0.12729431655633,0,0,0.342233301085281,0.26940821205835,0.358611026963382,0.332660356546013,0.162806537221949,0.213454691755431,1.9307228228694,0.179650404213174,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0.961705476909699 | |||
|short_description=p5@MAPKAPK2 | |||
}} |
Revision as of 23:48, 10 January 2014
Short description: | p5@MAPKAPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAPKAPK2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -25bp_to_NM_004759, NM_032960_5end |
EntrezGene: | MAPKAPK2 |
HGNC: | 6887 |
UniProt: | P49137 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.18e-32 | 76 |
bone element | 7.48e-29 | 82 |
hematopoietic system | 1.59e-28 | 98 |
blood island | 1.59e-28 | 98 |
immune system | 6.87e-28 | 93 |
hemolymphoid system | 5.55e-27 | 108 |
skeletal element | 4.53e-25 | 90 |
skeletal system | 3.23e-21 | 100 |
lateral plate mesoderm | 1.15e-17 | 203 |
musculoskeletal system | 1.63e-11 | 167 |
connective tissue | 2.67e-10 | 371 |
mesoderm | 3.37e-08 | 315 |
mesoderm-derived structure | 3.37e-08 | 315 |
presumptive mesoderm | 3.37e-08 | 315 |