FFCP PHASE1:Hg19::chr16:49316021..49316036,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr16:49316021..49316036,+ | |||
|id=chr16:49316021..49316036,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.34e-11;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.97e-60;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;3.34e-11;2!DOID:4236;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.70e-11,2;DOID:4236,3.70e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-38!57;UBERON:0005068!1.08e-38!57;UBERON:0006241!1.08e-38!57;UBERON:0007135!1.08e-38!57;UBERON:0000073!5.36e-38!94;UBERON:0001016!5.36e-38!94;UBERON:0001017!6.37e-37!82;UBERON:0005743!1.19e-36!86;UBERON:0002616!1.44e-34!59;UBERON:0000955!7.46e-34!69;UBERON:0006238!7.46e-34!69;UBERON:0003075!4.84e-29!86;UBERON:0007284!4.84e-29!86;UBERON:0002780!3.19e-28!41;UBERON:0001890!3.19e-28!41;UBERON:0006240!3.19e-28!41;UBERON:0003080!2.14e-27!42;UBERON:0002346!2.78e-27!90;UBERON:0007023!1.22e-24!115;UBERON:0002020!1.15e-21!34;UBERON:0003528!1.15e-21!34;UBERON:0001893!1.26e-21!34;UBERON:0001869!5.65e-21!32;UBERON:0004121!3.00e-20!169;UBERON:0003056!5.35e-20!61;UBERON:0002791!5.57e-20!33;UBERON:0002619!8.20e-20!22;UBERON:0000924!1.73e-19!173;UBERON:0006601!1.73e-19!173;UBERON:0001950!6.56e-19!20;UBERON:0000956!4.63e-17!25;UBERON:0000203!4.63e-17!25;UBERON:0000033!5.50e-17!123;UBERON:0000153!9.75e-16!129;UBERON:0007811!9.75e-16!129;UBERON:0004733!1.51e-12!12;UBERON:0002028!1.51e-12!12;UBERON:0007277!1.51e-12!12;UBERON:0003076!2.91e-12!15;UBERON:0003057!2.91e-12!15;UBERON:0004732!1.87e-11!13;UBERON:0002680!9.01e-10!9;UBERON:0001895!9.01e-10!9;UBERON:0010092!9.01e-10!9;UBERON:0000200!1.15e-09!6;UBERON:0000025!7.77e-09!194;UBERON:0001894!2.79e-08!7;UBERON:0006222!2.79e-08!7;UBERON:0002771!6.85e-08!3;UBERON:0002021!7.97e-08!5;UBERON:0000988!8.87e-08!3;UBERON:0002298!1.53e-07!8;UBERON:0000483!3.54e-07!309;UBERON:0001871!4.08e-07!7;UBERON:0000119!5.36e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.38e-30;6!UBERON:0002680;1.16e-20;9!UBERON:0001895;1.16e-20;9!UBERON:0004733;1.11e-15;12!UBERON:0002028;1.11e-15;12!UBERON:0004732;1.58e-14;13!UBERON:0001016;2.38e-11;83!UBERON:0001905;3.34e-11;2!UBERON:0002757;3.34e-11;2!UBERON:0010134;3.34e-11;2!UBERON:0005408;3.34e-11;2!UBERON:0001899;3.34e-11;2!UBERON:0000073;2.20e-09;53!UBERON:0002616;2.20e-09;53!UBERON:0000955;1.14e-07;68!UBERON:0001017;1.45e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.13e-30,6;UBERON:0006215,1.13e-30,6;UBERON:0002680,1.02e-20,9;UBERON:0001895,1.02e-20,9;UBERON:0010092,1.02e-20,9;UBERON:0004733,1.00e-15,12;UBERON:0002028,1.00e-15,12;UBERON:0007277,1.00e-15,12;UBERON:0001017,5.89e-15,81;UBERON:0004732,1.44e-14,13;UBERON:0000955,1.14e-13,68;UBERON:0006238,1.14e-13,68;UBERON:0001016,1.84e-13,89;UBERON:0000073,3.72e-13,53;UBERON:0002616,3.72e-13,53;UBERON:0003076,1.02e-12,15;UBERON:0003057,1.02e-12,15;UBERON:0001049,1.84e-12,56;UBERON:0005068,1.84e-12,56;UBERON:0006241,1.84e-12,56;UBERON:0007135,1.84e-12,56;UBERON:0001905,4.09e-11,2;UBERON:0002757,4.09e-11,2;UBERON:0010134,4.09e-11,2;UBERON:0005408,4.09e-11,2;UBERON:0001899,4.09e-11,2;UBERON:0003075,1.59e-08,82;UBERON:0007284,1.59e-08,82;UBERON:0002346,3.99e-08,86;UBERON:0004121,6.50e-07,171;UBERON:0000924,6.50e-07,171;UBERON:0006601,6.50e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92960640696362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0,0,0.344743373241465,0,1.04174996959975,0.885741385813839,0,1.52581736317083,9.50981635408532,6.2064999980245,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.494255755786011,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0.275078873194468,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0,0.554645257684261,0.683060432355218,1.798532254171,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.754773679776773,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.41023272848151,1.00828678488687,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0.337687923091973,0,0,0.253663240775627,1.09394961803644,0,0,0,0,0,1.00885116665647,0.606965604236632,0.227662191351298,0,0,0,0.543757863814654,0.131545547125698,0,0,0,0,0,0,0,0,0.214429632529969,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0,0,0.549702583727146,0,0.231522474323834,0,0,0,0.235676547101626,0.392616934229891,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0.157771562193185,0.271965960763659,0,0,0,0,0,0.126166424835079,0,0,0.203977659483963,0.26721740526556,0,0,0.378893491091197,2.14371304124943,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:49316021..49316036,+ | |||
}} |
Revision as of 03:28, 12 January 2014
Short description: | p@chr16:49316021..49316036, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:49316021..49316036, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.13e-30 | 6 |
rhombic lip | 1.13e-30 | 6 |
regional part of metencephalon | 1.02e-20 | 9 |
metencephalon | 1.02e-20 | 9 |
future metencephalon | 1.02e-20 | 9 |
segmental subdivision of hindbrain | 1.00e-15 | 12 |
hindbrain | 1.00e-15 | 12 |
presumptive hindbrain | 1.00e-15 | 12 |
central nervous system | 5.89e-15 | 81 |
segmental subdivision of nervous system | 1.44e-14 | 13 |
brain | 1.14e-13 | 68 |
future brain | 1.14e-13 | 68 |
nervous system | 1.84e-13 | 89 |
regional part of nervous system | 3.72e-13 | 53 |
regional part of brain | 3.72e-13 | 53 |
posterior neural tube | 1.02e-12 | 15 |
chordal neural plate | 1.02e-12 | 15 |
neural tube | 1.84e-12 | 56 |
neural rod | 1.84e-12 | 56 |
future spinal cord | 1.84e-12 | 56 |
neural keel | 1.84e-12 | 56 |
pineal body | 4.09e-11 | 2 |
regional part of epithalamus | 4.09e-11 | 2 |
secretory circumventricular organ | 4.09e-11 | 2 |
circumventricular organ | 4.09e-11 | 2 |
epithalamus | 4.09e-11 | 2 |
neural plate | 1.59e-08 | 82 |
presumptive neural plate | 1.59e-08 | 82 |
neurectoderm | 3.99e-08 | 86 |
ectoderm-derived structure | 6.50e-07 | 171 |
ectoderm | 6.50e-07 | 171 |
presumptive ectoderm | 6.50e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.70e-11 | 2 |
carcinosarcoma | 3.70e-11 | 2 |