FFCP PHASE1:Hg19::chr17:45899126..45899178,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16387 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZF2,Q8WXP9 | |||
|association_with_transcript=0bp_to_ENST00000007414,NM_145798,uc002ilx.1_5end | |||
|description=CAGE_peak_1_at_OSBPL7_5end | |||
|id=chr17:45899126..45899178,- | |||
|ontology_enrichment_celltype=CL:0000838!4.17e-16!52;CL:0000542!4.85e-16!53;CL:0000051!4.85e-16!53;CL:0000791!2.32e-11!18;CL:0000789!2.32e-11!18;CL:0002420!2.32e-11!18;CL:0002419!2.32e-11!18;CL:0000790!2.32e-11!18;CL:0000084!1.09e-10!25;CL:0000827!1.09e-10!25;CL:0000625!8.42e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.32e-11;18!CL:0000789;2.32e-11;18!CL:0002419;2.32e-11;18!CL:0000084;1.03e-10;25!CL:0000542;7.46e-10;53!CL:0000625;7.66e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.05e-16,52;CL:0000542,4.72e-16,53;CL:0000051,4.72e-16,53;CL:0000791,2.32e-11,18;CL:0000789,2.32e-11,18;CL:0002420,2.32e-11,18;CL:0002419,2.32e-11,18;CL:0000790,2.32e-11,18;CL:0000084,1.05e-10,25;CL:0000827,1.05e-10,25;CL:0000625,8.41e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.32e-11;18!CL:0000051;7.46e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.38e-09!57;UBERON:0005068!7.38e-09!57;UBERON:0006241!7.38e-09!57;UBERON:0007135!7.38e-09!57;UBERON:0000955!2.26e-08!69;UBERON:0006238!2.26e-08!69;UBERON:0005743!2.30e-08!86;UBERON:0001017!3.59e-08!82;UBERON:0000073!4.35e-08!94;UBERON:0001016!4.35e-08!94;UBERON:0003075!9.47e-08!86;UBERON:0007284!9.47e-08!86;UBERON:0002616!1.08e-07!59;UBERON:0002346!1.66e-07!90;UBERON:0002780!8.70e-07!41;UBERON:0001890!8.70e-07!41;UBERON:0006240!8.70e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.86e-09,56;UBERON:0005068,1.86e-09,56;UBERON:0006241,1.86e-09,56;UBERON:0007135,1.86e-09,56;UBERON:0000073,6.45e-09,53;UBERON:0002616,6.45e-09,53;UBERON:0000955,6.98e-09,68;UBERON:0006238,6.98e-09,68;UBERON:0003075,1.09e-08,82;UBERON:0007284,1.09e-08,82;UBERON:0001017,1.25e-08,81;UBERON:0002346,2.15e-08,86;UBERON:0001016,2.64e-08,89;UBERON:0003056,3.52e-07,61;UBERON:0002780,8.70e-07,41;UBERON:0001890,8.70e-07,41;UBERON:0003080,8.70e-07,41;UBERON:0006240,8.70e-07,41 | |||
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| |||
|short_description=p1@OSBPL7 | |||
}} |
Revision as of 15:56, 20 January 2014
Short description: | p1@OSBPL7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OSBPL7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000007414, NM_145798, uc002ilx.1_5end |
EntrezGene: | OSBPL7 |
HGNC: | 16387 |
UniProt: | Q9BZF2Q8WXP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.05e-16 | 52 |
lymphocyte | 4.72e-16 | 53 |
common lymphoid progenitor | 4.72e-16 | 53 |
mature alpha-beta T cell | 2.32e-11 | 18 |
alpha-beta T cell | 2.32e-11 | 18 |
immature T cell | 2.32e-11 | 18 |
mature T cell | 2.32e-11 | 18 |
immature alpha-beta T cell | 2.32e-11 | 18 |
T cell | 1.05e-10 | 25 |
pro-T cell | 1.05e-10 | 25 |
CD8-positive, alpha-beta T cell | 8.41e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.86e-09 | 56 |
neural rod | 1.86e-09 | 56 |
future spinal cord | 1.86e-09 | 56 |
neural keel | 1.86e-09 | 56 |
regional part of nervous system | 6.45e-09 | 53 |
regional part of brain | 6.45e-09 | 53 |
brain | 6.98e-09 | 68 |
future brain | 6.98e-09 | 68 |
neural plate | 1.09e-08 | 82 |
presumptive neural plate | 1.09e-08 | 82 |
central nervous system | 1.25e-08 | 81 |
neurectoderm | 2.15e-08 | 86 |
nervous system | 2.64e-08 | 89 |
pre-chordal neural plate | 3.52e-07 | 61 |
regional part of forebrain | 8.70e-07 | 41 |
forebrain | 8.70e-07 | 41 |
anterior neural tube | 8.70e-07 | 41 |
future forebrain | 8.70e-07 | 41 |