FFCP PHASE1:Hg19::chr19:47813110..47813125,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1338 | |||
|TSSclassifier=not | |||
|UniProt=P21730 | |||
|association_with_transcript=6bp_to_ENST00000355085,NM_001736,uc002pgj.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_C5AR1_5end | |||
|id=chr19:47813110..47813125,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.84e-41!76;CL:0000738!1.72e-36!140;CL:0000839!2.14e-34!70;CL:0000557!3.04e-33!71;CL:0002194!7.88e-33!63;CL:0000576!7.88e-33!63;CL:0000040!7.88e-33!63;CL:0000559!7.88e-33!63;CL:0002057!1.56e-32!42;CL:0002009!3.09e-32!65;CL:0000763!3.09e-32!112;CL:0000049!3.09e-32!112;CL:0000037!6.40e-32!172;CL:0000566!6.40e-32!172;CL:0000860!1.41e-30!45;CL:0002032!8.44e-30!165;CL:0000837!8.44e-30!165;CL:0002031!2.21e-28!124;CL:0000988!8.12e-28!182;CL:0002087!9.14e-28!119;CL:0002320!1.03e-09!365;CL:0000134!2.11e-09!358;CL:0000094!8.36e-08!8;CL:0002393!1.92e-07!9;CL:0002397!1.92e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.11e-29;33!CL:0002057;9.11e-29;33!CL:0000473;3.53e-28;39!CL:0000234;3.53e-28;39!CL:0000576;4.52e-24;48!CL:0000766;7.67e-22;69!CL:0000763;7.27e-11;100!CL:0000738;2.11e-09;136!CL:0002087;3.09e-09;104!CL:0000094;4.36e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.93e-50,72;CL:0000473,6.41e-44,48;CL:0000234,6.41e-44,48;CL:0000557,3.05e-40,67;CL:0002194,3.06e-40,59;CL:0000576,3.06e-40,59;CL:0000040,3.06e-40,59;CL:0000559,3.06e-40,59;CL:0000839,9.32e-40,66;CL:0002009,1.25e-39,61;CL:0000738,5.12e-39,136;CL:0000860,6.47e-39,42;CL:0002057,6.47e-39,42;CL:0000763,6.05e-34,108;CL:0000049,6.05e-34,108;CL:0000037,5.64e-30,168;CL:0002087,4.89e-29,115;CL:0002031,2.46e-28,120;CL:0002032,4.89e-28,161;CL:0000837,4.89e-28,161;CL:0000988,1.63e-26,177;CL:0000094,4.37e-09,8;CL:0002393,1.19e-08,9;CL:0002397,1.19e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.06e-28;42!CL:0000049;1.36e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.90e-40!115;UBERON:0002390!4.18e-38!102;UBERON:0003061!4.18e-38!102;UBERON:0002193!5.50e-34!112;UBERON:0002371!1.26e-31!80;UBERON:0001474!4.70e-27!86;UBERON:0002405!4.13e-25!115;UBERON:0004765!2.59e-22!101;UBERON:0001434!2.59e-22!101;UBERON:0000479!1.94e-11!787;UBERON:0001049!9.00e-11!57;UBERON:0005068!9.00e-11!57;UBERON:0006241!9.00e-11!57;UBERON:0007135!9.00e-11!57;UBERON:0002616!1.01e-09!59;UBERON:0002384!3.23e-09!375;UBERON:0003080!1.25e-08!42;UBERON:0003081!1.85e-08!216;UBERON:0002204!2.79e-08!167;UBERON:0002780!3.07e-08!41;UBERON:0001890!3.07e-08!41;UBERON:0006240!3.07e-08!41;UBERON:0000062!3.96e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.30e-11;114!UBERON:0000178;8.37e-08;15!UBERON:0000179;8.37e-08;15!UBERON:0000463;8.37e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.74e-45,98;UBERON:0003061,6.74e-45,98;UBERON:0007023,1.95e-42,114;UBERON:0002193,4.38e-40,108;UBERON:0002371,2.47e-36,76;UBERON:0002405,6.83e-33,93;UBERON:0001474,1.07e-31,82;UBERON:0004765,2.40e-27,90;UBERON:0001434,9.11e-23,100;UBERON:0003081,3.28e-15,203;UBERON:0001049,6.35e-11,56;UBERON:0005068,6.35e-11,56;UBERON:0006241,6.35e-11,56;UBERON:0007135,6.35e-11,56;UBERON:0000479,4.04e-10,773;UBERON:0000073,1.01e-09,53;UBERON:0002616,1.01e-09,53;UBERON:0002204,1.13e-08,167;UBERON:0002780,4.72e-08,41;UBERON:0001890,4.72e-08,41;UBERON:0003080,4.72e-08,41;UBERON:0006240,4.72e-08,41;UBERON:0000178,8.39e-08,15;UBERON:0000179,8.39e-08,15;UBERON:0000463,8.39e-08,15 | |||
|phase1_expression=0.54503513781167,2.14100523890983,3.94672331468719,6.00439790118782,0.893922188854576,4.36169262050184,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,7.39557661096953,0,0,0,0,0,0,0,0,0,1.37544130346312,1.23150884174919,1.02324015707783,671.866184857928,248.721449966994,613.536296701609,0,0,0,0,0,0.587200878669695,143.484810809756,237.043536909707,192.922664066392,107.255512160924,173.930898652192,135.742324143216,861.77536124648,660.527149568039,533.684934613196,1218.85786953341,1118.78782330739,1448.4966966764,697.366358988893,544.597662080868,354.959827062766,1153.51904774473,935.307306512964,1142.99954685624,1444.38347131041,1302.85396037616,826.757699273466,1769.77706568856,1334.4228945824,1400.1483054999,362.176727605014,320.338634140341,258.718423573345,967.557601587699,845.403984789798,784.756033734424,755.25348776177,477.156870354484,491.498355567679,714.976812610009,875.395940742441,608.24070866138,283.715849516938,279.149445854102,208.400693635326,321.933856865855,358.9227738912,282.39485582677,334.604961152226,326.621183960906,272.900245724363,0,6.55366333514558,0.889509253863555,7.25441378363062,0.400395987036012,3.4485146397269,6.61044872784862,3.81621501814146,0.569212969109448,14.0936925449025,3.44045905312706,5.28685314316103,22.4203425192614,2.37045676297569,0.393419540227666,0.393010762749165,3.08402248499264,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,3.18565414324097,0.651083453856419,0,6.02300476311091,3.19966527886046,12.4930726552346,15.6272986349051,4.10563998460523,0.201606743224732,0,0.289648807765598,0,0,0.383587685530591,0,0,0,0,0,0,0,0.614843499851882,10.8712632663101,0,0,2.92092654289215,0.870648686496336,20.4755259199052,13.8324562097098,15.4438625910635,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1934.53652796141,2311.17037432402,0,0,0,0.132409180813219,0,4.61068896857864,0,0,0,0,0.269421344139376,0,0.605429710579726,0.576175924479999,0.70296429550139,0.936480230490962,0.570471821544449,0,0.587172493218824,0.485618833104395,0.280901613404497,0.816616685019573,0.491337269247072,1.65321249881225,0,0,0,0.718618141816238,0,0.375355559615893,0.554128230968366,0,0,0.150238058906597,0,0.538168907066586,0,0,0,0,0.515281080091258,0.18611685633159,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,3.21620469096443,6.90674606762403,15.3241416250553,4.33127689001751,0,0.337169380156203,0,0.220587945464788,0,0,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0,0,0,6.87979051674338,7.68026878685825,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,143.298297542865,274.955011538604,211.650775099149,0,0,0,0,0,0,6.40462209264727,0.088048434013226,53.2833256939784,50.5861036493535,25.6272139855551,0,0,0,0,0,0,0,2.69114602428866,0,0.36669142910475,0,3.57656445851882,0,0,0,1.28603687131071,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,313.789354054271,303.363283225004,299.384194065905,0,0,0,0.144781306667579,0,0,0,3.15249216323084,0.646882724578552,5.00537841491019,0,0,0,0.837581326671744,0,2192.3435590934,1992.41531829881,1936.56369428659,0.24538298343828,1.50051156317903,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,139.154881580703,147.332799159115,105.233371994196,0,0,0,0.496215615637554,4.29693525206575,0.561320188866147,2.05022638809122,0.511707249066704,0.160853921143607,7.42090332224955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,34.6217799136347,0,0,0,0,0,0,0,0,0,0,0,0.93749290157711,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,5.21021717103534,0,0.190630193923825,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78841148289775,0,0,0,0,0,0.633322905892992,0,0,0.699869440489966,0,2.68120910214315,0,37.2809451076045,0,0,0,0,341.51224101325,323.441538621225,277.987827340991,120.783510157099,138.629086030047,387.138566782052,308.357950662964,222.075049362396,0,0,0,0,0,0,0,0,0.191505370132367,0.635020748171649,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,2.50634477090067,0,0,0,1.27753871307098,5.15258017133647,0,0.223676107892416,0.166849141711909,0.781552381608161,0,0,0.270455678475983,0,1.4098700508785,0,54.2080263306008,0,4.56917875537661,0,0.95497793895076,14.5512693607993,0,18.8888053075597,1.96937182974718,1.66963057534359,0,0,38.6541097207075,5.24939439509181,0,0,0,0,0,0,0,18.7422470710174,263.431401581634,60.0139746781039,0,4.63840490809256,0,0,0,13.0499923578263,0,0,0,0,0,0,20.3720518737183,3.0149109656352,3.05163472634166,1.21637185924347,1.77328571372128,5.92340572315726,0,0,6.54077197282275,0.227884111694002,0,0.359030577639089,0,7.97502899329799,2.65633020865401,17.0571128325963,0,3.76752615348059,2.99181027420282,0,0,0,0,4.13235105348985,0,0,0,0,0.995261931078505,9.37650183735395,9.16545217400438,0,0,0,6.26830536720296,10.4335094148843,1.40558667435203,0,0,0,2.36750641709634,6.04953580243319,0,48.0849870972793,0,0,0,0,0.627865836814451,0,0,0,0,0,0,8.03742673913339,0,0.09675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| |||
|short_description=p1@C5AR1 | |||
}} |
Revision as of 00:10, 21 January 2014
Short description: | p1@C5AR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C5AR1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 6bp_to_ENST00000355085, NM_001736, uc002pgj.1_5end |
EntrezGene: | C5AR1 |
HGNC: | 1338 |
UniProt: | P21730 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.93e-50 | 72 |
defensive cell | 6.41e-44 | 48 |
phagocyte | 6.41e-44 | 48 |
granulocyte monocyte progenitor cell | 3.05e-40 | 67 |
monopoietic cell | 3.06e-40 | 59 |
monocyte | 3.06e-40 | 59 |
monoblast | 3.06e-40 | 59 |
promonocyte | 3.06e-40 | 59 |
myeloid lineage restricted progenitor cell | 9.32e-40 | 66 |
macrophage dendritic cell progenitor | 1.25e-39 | 61 |
leukocyte | 5.12e-39 | 136 |
classical monocyte | 6.47e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.47e-39 | 42 |
myeloid cell | 6.05e-34 | 108 |
common myeloid progenitor | 6.05e-34 | 108 |
hematopoietic stem cell | 5.64e-30 | 168 |
nongranular leukocyte | 4.89e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 2.46e-28 | 120 |
hematopoietic oligopotent progenitor cell | 4.89e-28 | 161 |
hematopoietic multipotent progenitor cell | 4.89e-28 | 161 |
hematopoietic cell | 1.63e-26 | 177 |
granulocyte | 4.37e-09 | 8 |
intermediate monocyte | 1.19e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.19e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.74e-45 | 98 |
blood island | 6.74e-45 | 98 |
adult organism | 1.95e-42 | 114 |
hemolymphoid system | 4.38e-40 | 108 |
bone marrow | 2.47e-36 | 76 |
immune system | 6.83e-33 | 93 |
bone element | 1.07e-31 | 82 |
skeletal element | 2.40e-27 | 90 |
skeletal system | 9.11e-23 | 100 |
lateral plate mesoderm | 3.28e-15 | 203 |
neural tube | 6.35e-11 | 56 |
neural rod | 6.35e-11 | 56 |
future spinal cord | 6.35e-11 | 56 |
neural keel | 6.35e-11 | 56 |
tissue | 4.04e-10 | 773 |
regional part of nervous system | 1.01e-09 | 53 |
regional part of brain | 1.01e-09 | 53 |
musculoskeletal system | 1.13e-08 | 167 |
regional part of forebrain | 4.72e-08 | 41 |
forebrain | 4.72e-08 | 41 |
anterior neural tube | 4.72e-08 | 41 |
future forebrain | 4.72e-08 | 41 |
blood | 8.39e-08 | 15 |
haemolymphatic fluid | 8.39e-08 | 15 |
organism substance | 8.39e-08 | 15 |