FFCP PHASE1:Hg19::chr2:228246354..228246368,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26230 | |||
|TSSclassifier=not | |||
|UniProt=C9JES4 | |||
|association_with_transcript=342bp_to_ENST00000449706_5end | |||
|coexpression_cluster_id=C465 | |||
|description=CAGE_peak_2_at_TM4SF20_5end | |||
|id=chr2:228246354..228246368,- | |||
|ontology_enrichment_celltype=CL:0000135!4.64e-16!3;CL:0000386!4.64e-16!3;CL:0000388!4.64e-16!3;CL:0000197!8.12e-15!6;CL:0000098!8.12e-15!6;CL:0002167!8.12e-15!6;CL:0000057!1.03e-13!75;CL:0002617!7.88e-11!2;CL:0000499!1.06e-10!27;CL:0000153!5.00e-09!9;CL:0000447!5.00e-09!9;CL:0000055!1.67e-08!180;CL:0002556!1.94e-08!6;CL:0000667!4.85e-08!6;CL:0000058!4.85e-08!6;CL:0000138!4.85e-08!6;CL:0002580!1.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000197;8.03e-39;6!CL:0000098;8.03e-39;6!CL:0002167;8.03e-39;6!CL:0002552;2.59e-12;5!CL:0000710;6.63e-12;20!CL:0002556;2.52e-10;6!CL:0002077;1.17e-09;34!CL:0000075;6.99e-09;27!CL:0002561;2.87e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,8.03e-39,6;CL:0000098,8.03e-39,6;CL:0002167,8.03e-39,6;CL:0002552,2.67e-12,5;CL:0000710,6.63e-12,20;CL:0002077,1.44e-10,34;CL:0002556,2.41e-10,6;CL:0000075,6.99e-09,27;CL:0002561,3.08e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003099;8.63e-16;1!UBERON:0003852;8.63e-16;1 | |||
|ontology_enrichment_disease=DOID:2513!9.81e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2513;1.24e-15;1!DOID:3451;1.79e-08;2!DOID:4159;1.79e-08;2!DOID:0060122;1.79e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.16e-15,1;DOID:3451,1.73e-08,2;DOID:4159,1.73e-08,2;DOID:0060122,1.73e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000043!4.64e-16!3;UBERON:0001758!1.94e-08!6;UBERON:0003672!1.94e-08!6;UBERON:0000310!4.66e-08!10;UBERON:0003129!7.26e-08!11;UBERON:0001443!2.47e-07!11;UBERON:0005705!8.81e-07!1;UBERON:0008193!8.81e-07!1;UBERON:0002514!8.81e-07!1;UBERON:0003462!8.81e-07!1;UBERON:0008001!8.81e-07!1;UBERON:0007914!8.81e-07!1;UBERON:0003457!8.81e-07!1;UBERON:0009292!8.81e-07!1;UBERON:0007375!8.81e-07!1;UBERON:0003323!8.81e-07!1;UBERON:0002397!8.81e-07!1;UBERON:0001709!8.81e-07!1;UBERON:0004066!8.81e-07!1;UBERON:0002244!8.81e-07!1;UBERON:0005620!8.81e-07!1;UBERON:0004068!8.81e-07!1;UBERON:0004362!8.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;8.63e-16;1!UBERON:0008193;8.63e-16;1!UBERON:0010912;8.63e-16;1!UBERON:0002514;8.63e-16;1!UBERON:0003457;8.63e-16;1!UBERON:0008907;8.63e-16;1!UBERON:0008001;8.63e-16;1!UBERON:0007213;8.63e-16;1!UBERON:0009891;8.63e-16;1!UBERON:0007914;8.63e-16;1!UBERON:0007375;8.63e-16;1!UBERON:0003323;8.63e-16;1!UBERON:0010258;8.63e-16;1!UBERON:0005253;8.63e-16;1!UBERON:0007842;8.63e-16;1!UBERON:0002397;8.63e-16;1!UBERON:0003113;8.63e-16;1!UBERON:0003277;8.63e-16;1!UBERON:0001709;8.63e-16;1!UBERON:0002244;8.63e-16;1!UBERON:0005620;8.63e-16;1!UBERON:0010364;8.63e-16;1!UBERON:0004288;8.63e-16;1!UBERON:0011137;3.26e-12;11!UBERON:0010323;3.26e-12;11!UBERON:0001758;2.52e-10;6!UBERON:0003672;2.52e-10;6!UBERON:0003129;5.59e-09;7!UBERON:0000075;1.42e-08;16!UBERON:0004089;1.50e-08;2!UBERON:0000165;2.40e-08;28!UBERON:0005933;2.87e-08;2!UBERON:0005942;2.87e-08;2!UBERON:0005932;2.87e-08;2!UBERON:0001828;4.91e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,8.63e-16,1;UBERON:0008193,8.63e-16,1;UBERON:0010912,8.63e-16,1;UBERON:0002514,8.63e-16,1;UBERON:0003457,8.63e-16,1;UBERON:0008907,8.63e-16,1;UBERON:0008001,8.63e-16,1;UBERON:0007213,8.63e-16,1;UBERON:0009891,8.63e-16,1;UBERON:0007914,8.63e-16,1;UBERON:0009292,8.63e-16,1;UBERON:0003099,8.63e-16,1;UBERON:0007375,8.63e-16,1;UBERON:0003323,8.63e-16,1;UBERON:0010258,8.63e-16,1;UBERON:0007842,8.63e-16,1;UBERON:0009494,8.63e-16,1;UBERON:0010042,8.63e-16,1;UBERON:0010045,8.63e-16,1;UBERON:0010259,8.63e-16,1;UBERON:0010359,8.63e-16,1;UBERON:0009526,8.63e-16,1;UBERON:0002397,8.63e-16,1;UBERON:0003113,8.63e-16,1;UBERON:0003277,8.63e-16,1;UBERON:0001709,8.63e-16,1;UBERON:0004066,8.63e-16,1;UBERON:0002244,8.63e-16,1;UBERON:0005620,8.63e-16,1;UBERON:0004362,8.63e-16,1;UBERON:0010364,8.63e-16,1;UBERON:0010046,8.63e-16,1;UBERON:0005868,8.63e-16,1;UBERON:0007238,8.63e-16,1;UBERON:0004288,8.63e-16,1;UBERON:0004068,8.63e-16,1;UBERON:0010334,8.63e-16,1;UBERON:0003852,8.63e-16,1;UBERON:0010253,8.63e-16,1;UBERON:0010323,3.13e-12,11;UBERON:0000165,3.16e-12,29;UBERON:0000930,3.16e-12,29;UBERON:0001758,2.41e-10,6;UBERON:0003672,2.41e-10,6;UBERON:0011137,9.81e-10,14;UBERON:0003129,5.37e-09,7;UBERON:0000075,1.38e-08,16;UBERON:0005253,1.50e-08,2;UBERON:0004089,1.50e-08,2;UBERON:0005933,3.08e-08,2;UBERON:0005942,3.08e-08,2;UBERON:0005932,3.08e-08,2;UBERON:0001828,5.00e-08,8;UBERON:0001444,3.22e-07,49 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50401373190767,0.724232594804119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37600571456411,5.19260551484969,0,0,0,0,0,0.877955241761676,3.37136575378922,1.95309476578576,0,0,0.640672166455702,0.847727604638247,0,0,0,0,0,0.194874010322397,0,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,11.854339107256,131.323735754711,102.821974602125,59.7421216462837,0.902838299183157,2.27407504055985,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90975216557434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,2.51567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0490099165553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TM4SF20 | |||
}} |
Revision as of 09:01, 21 January 2014
Short description: | p2@TM4SF20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TM4SF20_5end |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | 342bp_to_ENST00000449706_5end |
EntrezGene: | TM4SF20 |
HGNC: | 26230 |
UniProt: | C9JES4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 8.03e-39 | 6 |
sensory epithelial cell | 8.03e-39 | 6 |
olfactory epithelial cell | 8.03e-39 | 6 |
fibroblast of gingiva | 2.67e-12 | 5 |
neurecto-epithelial cell | 6.63e-12 | 20 |
ecto-epithelial cell | 1.44e-10 | 34 |
fibroblast of periodontium | 2.41e-10 | 6 |
columnar/cuboidal epithelial cell | 6.99e-09 | 27 |
outer root sheath cell | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.16e-15 | 1 |
skin carcinoma | 1.73e-08 | 2 |
skin cancer | 1.73e-08 | 2 |
integumentary system cancer | 1.73e-08 | 2 |