FFCP PHASE1:Hg19::chr2:230786032..230786119,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9320 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12306 | |||
|TSSclassifier=strong | |||
|UniProt=C9JLJ5 | |||
|association_with_transcript=0bp_to_ENST00000428959_5end | |||
|coexpression_cluster_id=C778 | |||
|description=CAGE_peak_4_at_TRIP12_5end | |||
|id=chr2:230786032..230786119,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.61e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-34!115;UBERON:0001049!5.93e-26!57;UBERON:0005068!5.93e-26!57;UBERON:0006241!5.93e-26!57;UBERON:0007135!5.93e-26!57;UBERON:0001017!2.40e-25!82;UBERON:0000073!2.51e-25!94;UBERON:0001016!2.51e-25!94;UBERON:0005743!1.99e-24!86;UBERON:0000955!5.18e-23!69;UBERON:0006238!5.18e-23!69;UBERON:0003080!6.64e-22!42;UBERON:0002780!9.27e-22!41;UBERON:0001890!9.27e-22!41;UBERON:0006240!9.27e-22!41;UBERON:0000924!5.46e-21!173;UBERON:0006601!5.46e-21!173;UBERON:0002346!1.24e-20!90;UBERON:0002616!1.31e-20!59;UBERON:0004121!1.34e-19!169;UBERON:0003075!4.05e-19!86;UBERON:0007284!4.05e-19!86;UBERON:0002020!1.50e-17!34;UBERON:0003528!1.50e-17!34;UBERON:0001893!1.65e-17!34;UBERON:0002791!6.23e-17!33;UBERON:0001869!3.72e-16!32;UBERON:0000153!4.08e-16!129;UBERON:0007811!4.08e-16!129;UBERON:0000033!7.36e-16!123;UBERON:0003056!8.47e-15!61;UBERON:0000956!4.58e-12!25;UBERON:0000203!4.58e-12!25;UBERON:0002619!7.60e-12!22;UBERON:0001950!9.77e-11!20;UBERON:0000062!2.67e-09!511;UBERON:0000475!7.77e-09!365;UBERON:0002308!4.10e-07!9;UBERON:0000125!4.10e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.89e-18;41!UBERON:0001890;2.89e-18;41!UBERON:0001893;1.79e-17;34!UBERON:0003528;2.78e-17;34!UBERON:0002020;2.78e-17;34!UBERON:0000073;3.22e-17;53!UBERON:0002616;3.22e-17;53!UBERON:0002791;6.68e-17;32!UBERON:0001869;8.68e-17;32!UBERON:0000956;6.29e-14;25!UBERON:0000203;6.29e-14;25!UBERON:0002619;1.31e-13;22!UBERON:0000955;1.46e-12;68!UBERON:0001950;2.58e-12;20!UBERON:0001017;7.56e-12;75!UBERON:0001016;2.75e-11;83!UBERON:0007023;4.59e-10;114!UBERON:0000125;5.30e-08;9!UBERON:0002308;5.30e-08;9!UBERON:0002420;6.57e-07;9!UBERON:0007245;6.57e-07;9!UBERON:0010009;6.57e-07;9!UBERON:0010011;6.57e-07;9!UBERON:0000454;6.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.50e-36,114;UBERON:0001049,3.26e-30,56;UBERON:0005068,3.26e-30,56;UBERON:0006241,3.26e-30,56;UBERON:0007135,3.26e-30,56;UBERON:0001017,1.99e-29,81;UBERON:0001016,3.76e-29,89;UBERON:0000073,2.95e-28,53;UBERON:0002616,2.95e-28,53;UBERON:0000955,4.13e-27,68;UBERON:0006238,4.13e-27,68;UBERON:0002780,4.80e-25,41;UBERON:0001890,4.80e-25,41;UBERON:0003080,4.80e-25,41;UBERON:0006240,4.80e-25,41;UBERON:0002346,6.73e-24,86;UBERON:0004121,1.16e-22,171;UBERON:0000924,1.16e-22,171;UBERON:0006601,1.16e-22,171;UBERON:0003075,3.78e-22,82;UBERON:0007284,3.78e-22,82;UBERON:0003528,3.15e-20,34;UBERON:0002020,3.15e-20,34;UBERON:0001893,3.50e-20,34;UBERON:0011216,2.53e-19,223;UBERON:0002791,9.58e-19,32;UBERON:0001869,1.24e-18,32;UBERON:0010371,2.79e-17,104;UBERON:0003056,3.69e-17,61;UBERON:0000956,6.03e-14,25;UBERON:0000203,6.03e-14,25;UBERON:0002619,1.02e-13,22;UBERON:0001950,1.90e-12,20;UBERON:0010314,2.65e-12,132;UBERON:0000125,6.79e-08,9;UBERON:0002308,6.79e-08,9;UBERON:0002420,4.03e-07,9;UBERON:0007245,4.03e-07,9;UBERON:0010009,4.03e-07,9;UBERON:0010011,4.03e-07,9;UBERON:0000454,4.03e-07,9 | |||
|phase1_expression=1.45342703416445,0.642301571672949,1.69145284915165,0,1.78784437770915,0.872338524100369,0,2.52687949370732,1.30592814099919,0.491467873003018,0,0.436882744260345,0.263766978228454,1.48519623552056,1.32558950291166,0.672325146451775,0,0.730310090387373,0.487932798790507,0.369363174230364,0.204000691244253,0,2.57612388417951,1.23186982565596,2.51085279189606,0.993374274723366,0.985207073399349,0.787107813136792,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,0.553995408531877,0.601633342410425,0.868043482863407,0.671746422719773,0.647787332037959,1.03030227053675,1.01778767145695,0,0.727752183563449,0.232429036905685,0,0.619412741790207,0.575384784644301,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,2.44867113896722,0,0,0.329851300186716,0.598390972864896,1.27867425159808,1.7412554317715,0,1.24564449799115,0.75374599577023,0.521482918420201,0,3.02699751316684,0.736555271975129,0.316462387440884,0.422510572623884,0,0.419317291016752,0.336985893439485,0,0.48217676009124,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0,0.426730222566507,0.800791974072025,1.14950487990897,0,0,0,0.587237189370939,0,0,0.560508562981536,0.526768169550154,0.196709770113833,0.786021525498329,0,0.501559486172034,0.32592226663359,0,0,0.334231370655521,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0,0.289803085735052,0.444859689486181,0,0,0.113309342697566,0,0,0.253019692019503,0.637130828648193,1.30216690771284,0,0.150575119077773,0.895906278080929,0,0.473554504088034,0.821127996921047,0.403213486449465,0,0.434473211648397,2.43806866313962,0,0.12786256184353,0.722878304769133,1.50401373190767,0.724232594804119,1.5905718941022,0.973269740605272,2.3633704291017,1.99556457716308,1.75669571386252,7.98972360536047,0.364295288292542,0,0.97364218096405,0,0,0.715471872916026,0,0.371457501329565,0,1.72046919021225,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0,0.760272105718513,0,0,0,0.535798369704479,0,0.337834441449967,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,1.01304409331664,2.38336525463794,0.860509862246441,0.709336764396714,1.12135520028461,0,0,2.48968828319813,0.134710672069688,0.653847612453835,0,0,0.234321431833797,0.624320153660641,0.570471821544449,1.19558944441441,1.40921398372518,0.809364721840658,0.421352420106746,2.04154171254893,1.22834317311768,2.06651562351531,4.75201142912821,1.23633464639278,0,0,0.673344455816265,1.25118519871964,1.38532057742091,2.19488810440419,1.22595118319608,0.901428353439581,0.340296549480063,1.97328599257748,0.85422955527427,2.11931901159562,1.20036438433761,1.95799805553034,2.57640540045629,0.930584281657949,1.68776332241266,2.43592512902997,2.77677151668526,1.65689817556139,2.90962902273861,2.13005755509969,1.41052937518696,0.508681776931463,0,0.272746120590835,0.860413786167011,1.82960559194393,1.59035721985782,1.74290914304278,2.07322110030741,0,1.45990943630332,0,0.643240938192885,0,3.25057549622385,5.0531563716871,0.591534000199219,0.505754070234305,1.20505514941741,0.661763836394364,1.30727666455444,1.42362371466658,0.404493924480493,0.784885860501384,1.15424147083917,0.738155454624648,0,0,0,1.26755034821831,0,1.18157981336281,1.32438929824395,0.860919069801795,0.857839051492628,0.768251997860379,1.1240175325762,1.20634766893957,2.31471112896324,0.977424915930974,0,1.44331342025273,1.73895607462615,0.587043471179108,0,0,0.190254152234598,1.58040879591855,0,0.246217006087397,0.702012795417713,0.445893486866185,0.93733833986777,0.335964256397719,0.425325291727159,0.806026704325635,0.581267877027924,0,0.492663237895943,0.616339038092582,1.4512968087854,2.73827911492227,1.76739406796932,0.698476837213859,0.763976851116555,1.17217447210047,1.71072446022705,0.411309970813294,1.50171528921959,1.14330573052231,0.448524337381443,0,0.4400297149257,0.904902010304444,0,0,0.531876233169741,2.08014873822732,0.257207374262142,0,1.0656887160644,1.42977993658148,0,1.64648067356154,0,1.42156779497018,0.791951872933429,0.904318131178758,1.74306691720059,0.699810938274399,0,0,0,0.958499421966331,0,1.42636905040718,0.868687840005475,1.02738161275192,2.86497541183833,1.34502172792233,0.788123040807709,0.431255149719035,0.128343036279748,2.7950408664471,1.30139853857622,1.54657762555539,2.84777651068393,0.637938751653163,0,0,0,2.94459580125936,0.500170521059677,1.62759014219841,1.03985430765404,0.892144943985809,0.788512075169673,3.39710103478868,3.61135319673263,0,0,0,0.737476674166813,2.34585759063824,0.391602314925481,0,0.413536052245775,0.862856803274467,0.320182673410333,0.606255142892519,0,0.907170879989041,0.992431231275107,1.2276957863045,0.841980283299221,2.05022638809122,2.55853624533352,0.804269605718038,0,0.925258162815933,0.532685175939381,2.13530605635904,1.03850885836724,1.51073491997947,0.846016147141356,1.00253235151642,0.276242966807689,0.918515585316854,0.182091168006717,0.917870904715969,0,0.616122696835318,0.784349769176855,0,0.73886140225013,0,0,1.29549549661284,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0,1.09629938322967,0.784306353074702,1.02580050046556,0.984043937099117,0,1.54561517471583,1.73981983154852,1.89771849817352,1.14853107599234,0.650060246036521,0,0.580024309752732,1.3864375540318,0.767518373630648,0.551346289938122,3.11518710117994,2.32026710262766,0.852266274161009,1.4245125703478,0,0.576570202095319,1.14851441245126,0,0.929691098594572,1.88887408098384,0.6970372701606,1.54016790088044,0,0.869932992075073,0.18532421910392,1.00187420719394,1.116475108079,0.949138274156178,0.571890581771475,0,2.1396949401696,0.318203247925937,0,1.43897966066652,0.54907405947211,0.353437207037059,1.01091240786658,0,0.421258456238981,0,1.94970791705028,0,0.9554993798559,0.424216295861138,0,0.551365343546124,0.66343897524122,0.438450885253763,0,1.9676842561399,0.405820753925408,0.30982349809975,0,1.72093622644862,0.294747123039363,0.35667105148125,2.12856638442359,1.89996871767898,2.30506425071931,0.379473173765715,0.349934720244983,0.48111056362756,0,1.08890984861323,2.82431402330337,0,0,0.443430153536676,1.37834040124176,0.507447609232169,0.764637207142375,1.13929437434833,1.19115887728894,0.822724546172388,0.648473311192717,0.540031437238115,0,1.70918513803957,1.92495971052672,1.71528151186722,0.557409525377156,0.28853842595289,1.28055318027145,1.91311527274587,0.997896857164083,1.7235483311913,0.423347165447766,0,1.96558024679421,1.59764275323235,0.94007937463814,0,0.677167111206413,0.963528450622197,0.605399121573143,0.851692475380653,0.343505344755765,3.07240764308458,2.46043718681657,2.33588798396672,0.781552381608161,0.835218521685727,3.69262196843137,1.08182271390393,2.33150377598474,1.4098700508785,1.30998378285754,3.95572084034114,2.18448939149124,3.45474491260183,0.284136146806413,4.7748896947538,3.26661148915902,12.2864280839693,1.9882952955326,8.29949556822025,0.779160935160341,0.659215496907038,8.02276550886375,3.58646378851925,2.48655523978033,1.76352923497993,1.84083628503879,1.84627208191604,0,0.359473404589307,1.9692329214317,0,5.42538731003135,7.18449277040819,3.33410970433911,4.84666373047609,9.83341840515623,0,1.5625665665114,1.48681999993533,2.17499872630438,1.0241410345695,2.03402920234213,6.14607972596635,2.75794698593172,3.2076507472158,4.34062487333231,6.20018970069687,7.11518987889907,10.6807215421958,9.62039561401654,5.91095237907095,4.8264787373874,3.37709236908869,0.278847488557207,7.61807559187591,0.569710279235006,0.69169171316418,1.16684937732704,1.19512109114209,1.91400695839152,1.09917112082235,6.39641731222362,0,0.31396051279005,2.82559859230266,2.03036094555463,1.56850027454192,2.68514539161348,0.569261198172555,1.43042921082341,1.05499032264014,1.14262965711403,0.706765357169704,4.54416143458391,1.99052386215701,2.91909962861019,3.66618086960175,1.18608451472249,0.370691816839509,0,15.8392662504591,3.21031058919516,7.73072670893619,0,0.19566461893209,0.242780379534093,3.94584402849391,0,6.1214552326098,2.65383634439649,2.25485129121739,1.03688191397247,2.65861549082874,0.330991955875499,0.627865836814451,1.19472429772959,3.13070500632772,0,0.347119476670262,8.03537658797897,0.174118413160805,4.54289337429278,3.43972064943233,2.6124209448053,2.33885814675794,1.56019368401098,2.5217144286989,1.85337866052151,4.06765333404958,0.411125773940253,0.794858446811959,9.24337620955829,1.95551382734803,0.961905843018405,3.20179492109029,2.19790570540343,0.864542502924636,1.94712213482057,0.686379991447858,0.432164393964449,2.11229310461235,4.00679858848552,2.58217991539867,3.03348254305766,2.75395187618069,2.88950589901519,8.40588404193705,13.9643486469833,0,3.86788897277961,1.31443677139657,3.35138881526705,4.58320848023367,1.43574604915363,0.199679000498991,1.28767814440971,1.56220020209311,1.14211903227435,0.720599767084807,0,5.75117230842733,6.51085281211215,5.32487996448061,0.0984274815147488,1.27009998098677,7.15706720828373,7.49118733613666,0.482259445395058,2.06309154895851,2.49264202817511,1.349843349309,1.5476039091159,9.1124334987037,0.670869375198532,1.73372556058236,3.72427575758487,1.26720403823288,0.896436696664224,2.1110671705139,0.714695326373367,2.64836788146173,1.5256112259285,1.62899880526114,1.72844298240254,1.95952416065645,0,1.97022049798414,1.19271615249795,0.679872549120754,1.02586563574658,2.65013777824443,12.4111638107089,10.8430733429006,1.71086837884329,5.63852017853338,3.31040978959853,7.07419372948497,1.24271716604159,0.496166021811951,0,1.94868157409433,4.46838880439127,4.35214242695579,3.2589686222951,4.90152922821539,6.22957998348628,0.628216385000937,7.08854543973589,6.71144456960797,11.267183763585,7.45431954397093,11.4256923082958,13.2265338265147,4.15045904808692,1.8747061194316,0.606596470166591,1.7127920012698,1.17632909849086,4.21501415226193,3.33318365804898,0.149254802886874,0,0,1.32582103692562,2.0125432140206,3.55924488638614,0.686520205190771,1.36107831386915,0.777186002913902,0.295710299979268,0.63718706865481,0.449803112163605,1.08684069813382,1.24411862352257,1.06336685823198,0.521745061811734,0.601030435988874,0,1.22061219961398,0.909243296012797,0.214821114084977,1.39210127963548,1.19428766609585,0.800055529326307,1.03018711554838,1.34699795506368,3.78554694685953,0.192619830407303,2.78774068787403,0,0.680117776536817,0.463044948647668,2.69210374957114,1.07453304648892,2.16161013012681,1.75427239662966,1.23682402162117,0.192914038270915,2.19625172848994,5.38107189034688,1.0362910251936,0.303859956177382,11.8902255090488,0.974301544196942,0.664324201566815,0.981392365535065,0,0.983091635014877,0.845248493434508,1.79988656269437,0.853533837553127,0.688859918643263,1.70254786070051,1.84105950251841,0.279759015438889,1.24415452006595,4.22051425302051,1.61737217095023,2.98805289526203,7.42625539705695,2.37625541935635,2.76347396132188,4.21381598480607,1.11728983594649,0.954013051960256,1.26178792002005,0.80057074828547,1.41070377476274,1.2249819094128,8.47825771273266,4.25089728976755,11.8129055702292,6.76884001994492,3.52900374710405,4.56437866263838,8.71968486411996,7.13847101295772,1.27592034051333,2.47736419030255,1.65085738669511,0.231051332300676,0.381382095467167,1.3807198521202,0.795664888465099,7.7466638199735,0.40341013740704,0.781514011233092,0.523813388962845,1.47394725759087,2.21784129325568,7.69928464649699,7.02970288752463,12.6078945865722,7.86356046404445,8.20462213527329,2.19303106742873,1.98484471355718,7.21072101874444,0.383287282918786,8.57122937405259,7.73452561103295,8.49751845931284,5.69155478378244,1.68534503309014,0.806637912890455,3.25827217931095,12.9822189985749,6.44573180915921,2.36387681767936,0.667388411352415,5.80848887093804,8.95558862521211,3.08299379645168,2.73947616152849,2.15927591218621,2.8665101273223,5.78960007830916,3.31828584638726,1.74362138052188,1.73858272302579,1.60342272946051,2.27937780579341,3.7558064960669,10.3688949272114,0.860454717640555,0.946656005844523,0.681707238073262,3.38709640152743,1.60374807980835,0,0.955538938977433,1.00669888618013,0.687051635306701,3.29178397452127,3.88457302312737,3.07988420568741,1.1598144313382,1.94284397223656,0.701818390386317,2.58636007709779,2.73516208788408,3.04954421505192,2.74851291863573,0.905777061400041,2.2380505851304,3.27839340755936,2.35158648180761,3.67722482630858,1.17838273550813,14.1342096322761,12.7729952140647,2.9585900930838,0.339854229375634,1.2217909337381,1.09578409555081,1.59905849479886,1.42843150884526,0.705789743431384,0.401206833445841,1.46067277649303,0.917458566809082,14.620637481448,2.68211655728414,4.96337878393677,6.54526035510566,3.1741610430924,2.23197010900051,1.84870251452567,1.73050624849516,0.252332849670158,5.46327859818478,1.14028650910293,0.407955318967927,0.534434810531121,0.275684698604535,1.0028301571695,10.3059029576806,11.2544934665595,10.7792027129641,13.4462894620464,2.55880778281177,3.57096647195611,1.42095601639213,1.80016671457988,0.897054900644907,2.5458863311266,2.62752345645685,2.61260097476354,1.02669990325584,1.27968900727716,1.79305513481691,3.65926392200615,0.976839223331694,2.98836568457603,3.8614456457388,0.898252021065869,0,7.70121098352059,3.66206560484165,6.65756774185513,1.61019034872821,0.641136984606466 | |||
|short_description=p4@TRIP12 | |||
}} |
Revision as of 09:05, 21 January 2014
Short description: | p4@TRIP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIP12_5end |
Coexpression cluster: | C778_thalamus_substantia_optic_spinal_globus_hippocampus_corpus |
Association with transcript: | 0bp_to_ENST00000428959_5end |
EntrezGene: | TRIP12 |
HGNC: | 12306 |
UniProt: | C9JLJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data