FFCP PHASE1:Hg19::chr2:239335396..239335448,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51665 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16011 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000463352_5end | |||
|coexpression_cluster_id=C4206 | |||
|description=CAGE_peak_3_at_ASB1_5end | |||
|id=chr2:239335396..239335448,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.40e-27!679;CL:0000004!1.40e-27!679;CL:0000255!1.40e-27!679;CL:0000012!5.74e-27!682;CL:0002371!5.90e-21!591;CL:0000144!8.90e-20!625;CL:0000003!1.34e-18!722;CL:0000055!2.52e-18!180;CL:0000220!5.45e-16!246;CL:0002321!2.40e-15!248;CL:0000222!6.44e-14!119;CL:0000359!1.09e-13!32;CL:0000680!2.13e-13!57;CL:0000056!2.13e-13!57;CL:0000355!2.13e-13!57;CL:0000187!2.31e-13!54;CL:0000057!2.35e-13!75;CL:0000183!9.97e-13!59;CL:0000063!2.43e-12!578;CL:0000192!2.98e-12!42;CL:0000514!2.98e-12!42;CL:0000393!5.32e-11!60;CL:0000211!5.32e-11!60;CL:0000723!7.94e-11!436;CL:0000048!5.61e-10!430;CL:0000034!2.27e-09!444;CL:0002494!1.00e-08!16;CL:0002368!6.81e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.52e-15;32!CL:0000192;5.83e-11;43!CL:0002494;2.24e-10;16!CL:0000187;2.69e-08;55!CL:0002539;1.54e-07;10!CL:0002334;7.55e-07;12!CL:0002368;8.79e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.64e-16,32;CL:0000187,3.41e-15,55;CL:0000680,4.40e-15,58;CL:0000056,4.40e-15,58;CL:0000355,4.40e-15,58;CL:0000057,9.31e-15,76;CL:0000192,3.36e-14,43;CL:0000514,3.36e-14,43;CL:0002321,3.82e-14,250;CL:0000222,6.24e-13,121;CL:0000723,6.50e-13,433;CL:0000048,5.02e-12,427;CL:0000393,5.93e-12,61;CL:0000211,5.93e-12,61;CL:0000034,7.74e-12,441;CL:0002494,2.20e-10,16;CL:0002539,1.56e-07,10;CL:0002334,5.02e-07,12;CL:0002368,8.47e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000514;5.83e-11;43!CL:0000355;6.82e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.09e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.01e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.54e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!8.76e-20!42;UBERON:0003509!8.76e-20!42;UBERON:0004572!8.76e-20!42;UBERON:0004573!2.50e-16!33;UBERON:0004571!2.50e-16!33;UBERON:0004872!2.36e-15!84;UBERON:0003914!6.24e-15!118;UBERON:0001981!2.18e-14!60;UBERON:0007500!2.18e-14!60;UBERON:0004537!2.18e-14!60;UBERON:0006965!2.18e-14!60;UBERON:0000055!3.05e-13!69;UBERON:0002049!3.13e-13!79;UBERON:0007798!3.13e-13!79;UBERON:0000486!1.00e-12!82;UBERON:0000490!2.04e-12!138;UBERON:0004290!2.16e-12!70;UBERON:0000914!6.89e-12!83;UBERON:0002329!6.89e-12!83;UBERON:0003077!6.89e-12!83;UBERON:0003059!6.89e-12!83;UBERON:0007282!6.89e-12!83;UBERON:0009618!6.89e-12!83;UBERON:0007285!6.89e-12!83;UBERON:0000926!1.37e-11!448;UBERON:0004120!1.37e-11!448;UBERON:0006603!1.37e-11!448;UBERON:0001134!1.40e-11!61;UBERON:0002036!1.40e-11!61;UBERON:0003082!1.40e-11!61;UBERON:0002385!1.30e-10!63;UBERON:0001015!1.30e-10!63;UBERON:0000383!1.30e-10!63;UBERON:0004535!1.95e-10!110;UBERON:0002204!2.46e-10!167;UBERON:0005256!2.83e-10!143;UBERON:0002100!6.49e-10!216;UBERON:0001009!1.03e-09!113;UBERON:0000947!3.53e-09!21;UBERON:0010191!3.53e-09!21;UBERON:0000467!6.38e-09!625;UBERON:0000480!1.10e-08!626;UBERON:0000468!2.67e-07!659;UBERON:0003104!4.26e-07!238;UBERON:0009142!4.26e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.52e-18;33!UBERON:0004571;3.52e-18;33!UBERON:0001637;1.58e-17;42!UBERON:0003509;1.58e-17;42!UBERON:0004572;1.58e-17;42!UBERON:0000947;2.37e-11;21!UBERON:0010191;2.37e-11;21!UBERON:0007500;2.53e-09;56!UBERON:0001981;2.53e-09;56!UBERON:0004537;2.53e-09;56!UBERON:0004237;1.54e-07;10!UBERON:0004695;1.54e-07;10!UBERON:0002111;1.54e-07;10!UBERON:0004178;1.54e-07;10!UBERON:0000055;8.02e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.69e-24,42;UBERON:0003509,1.69e-24,42;UBERON:0004572,1.69e-24,42;UBERON:0004573,3.05e-20,33;UBERON:0004571,3.05e-20,33;UBERON:0004872,6.14e-18,83;UBERON:0007500,6.18e-16,59;UBERON:0001981,6.18e-16,59;UBERON:0004537,6.18e-16,59;UBERON:0006965,6.18e-16,59;UBERON:0003914,1.50e-15,117;UBERON:0000486,1.54e-15,83;UBERON:0002329,9.39e-15,71;UBERON:0003059,9.39e-15,71;UBERON:0007282,9.39e-15,71;UBERON:0004290,9.39e-15,71;UBERON:0009618,9.39e-15,71;UBERON:0007524,1.54e-14,73;UBERON:0007503,1.99e-14,78;UBERON:0003077,2.93e-14,72;UBERON:0007285,2.93e-14,72;UBERON:0002049,3.10e-14,78;UBERON:0007798,3.10e-14,78;UBERON:0000055,4.01e-14,68;UBERON:0000490,6.96e-14,148;UBERON:0001134,1.91e-13,62;UBERON:0002036,1.91e-13,62;UBERON:0003082,1.91e-13,62;UBERON:0004535,1.82e-12,109;UBERON:0002385,1.86e-12,64;UBERON:0001015,1.86e-12,64;UBERON:0000383,1.86e-12,64;UBERON:0001009,1.72e-11,112;UBERON:0005256,1.83e-11,122;UBERON:0000947,2.18e-11,21;UBERON:0010191,2.18e-11,21;UBERON:0000926,1.40e-10,315;UBERON:0004120,1.40e-10,315;UBERON:0006603,1.40e-10,315;UBERON:0002204,8.42e-09,167;UBERON:0002100,1.20e-08,199;UBERON:0000483,4.58e-08,306;UBERON:0000119,1.23e-07,309;UBERON:0003081,1.24e-07,203;UBERON:0004237,1.56e-07,10;UBERON:0004695,1.56e-07,10;UBERON:0002111,1.56e-07,10;UBERON:0004178,1.56e-07,10;UBERON:0000948,7.29e-07,24;UBERON:0005498,7.29e-07,24;UBERON:0004140,7.29e-07,24;UBERON:0009881,7.29e-07,24;UBERON:0004141,7.29e-07,24;UBERON:0003084,7.29e-07,24;UBERON:0007005,7.29e-07,24;UBERON:0004139,7.29e-07,24;UBERON:0004291,7.29e-07,24 | |||
|phase1_expression=1.09007027562334,1.92690471501885,1.69145284915165,3.00219895059391,0,4.36169262050184,2.53299878168311,0.631719873426831,0.783556884599516,0.982935746006035,1.39560233594486,0.218441372130172,0.263766978228454,0.990130823680373,0.662794751455832,4.03395087871065,4.21886169616784,1.46062018077475,3.90346239032406,1.23121058076788,0.408001382488506,0.313454721478088,0.572471974262113,1.09499540058307,0.753255837568817,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.309632246632152,10.1136334692682,8.73497164456925,24.7735186811748,0,0,0.293600439334847,1.66198622559563,2.4065333696417,1.30206522429511,0.223915474239924,0.647787332037959,0.515151135268373,0.581592955118259,0.755751887377619,0.970336244751265,2.55671940596253,1.23350366406548,5.26500830521676,2.8769239232215,3.07392847834921,3.31075121844019,4.82643953031266,3.87290810150296,2.70852973188684,1.12945403725563,1.09162460023138,0.898893937780338,2.14258724659632,5.1348644332175,3.19668562899521,1.31940520074686,0.598390972864896,0.426224750532694,4.93355705668593,6.80862269629368,4.9825779919646,0.75374599577023,1.5644487552606,1.73751075764093,6.65939452896706,6.99727508376373,7.91155968602211,0,0.637812899895131,0.209658645508376,0.561643155732475,0.300353785683013,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,1.17447437874188,0.764546456250458,0,1.12101712596307,0,0.393419540227666,0,0.822405995998037,0,0.651844533267181,0,0,0.222820913770347,0,0.221533894583621,0,0.25618263945135,0.390178042679635,0.164437904603676,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0.566546713487831,0.766440987203842,0,0.506039384039006,0,0,0,0,0,0,0.473554504088034,0,0.403213486449465,0.267440195783507,0.144824403882799,2.43806866313962,2.01210257911091,1.79007586580942,0,2.00535164254356,0.579386075843295,0.795285947051099,0.486634870302636,2.3633704291017,2.66075276955077,1.31752178539689,0.261958150995425,0,1.11235332835329,0.649094787309367,0.174129737299267,0.531831842075461,0.238490624305342,0,0,3.57772333260069,4.30117297553062,3.12426451446835,5.08777147731609,1.67799774483962,2.47606237746061,5.01587919688345,0.258416759169329,0.71153252537342,1.00416183829401,0.805658634218294,0,1.46437234528902,0,2.43042584364528,0.892997282840798,0.673588117878509,1.23872628531654,3.06633274931766,0.949265659568129,1.83201743930407,1.31780417436063,0,4.36094052142534,8.44852317882041,11.143485026483,35.088432915503,24.3811127636492,7.4480360261655,5.60677600142307,6.4049397437823,6.90669135568048,3.7345324247972,6.33140158727534,4.25000948094993,0.302714855289863,0,7.0296429550139,2.49728061464256,4.56377457235559,4.78235777765763,1.29177948508141,1.78060238804945,1.68540968042698,1.63323337003915,0.859840221182376,0.516628905878827,0,3.95627086845691,2.73048408581408,14.3723628363248,0.841680569770331,0.375355559615893,1.38532057742091,3.5118209670467,4.59731693698529,4.5071417671979,6.4656344401212,2.69084453533293,0.427114777637135,2.96704661623387,9.30282397861647,4.63736381572975,6.69865404118636,0.558350568994769,5.90717162844432,1.07180705677318,6.31084435610286,0.920498986422993,0.484938170456436,3.19508633264953,1.20902517873168,1.18692414617341,2.70565194428616,1.63647672354501,1.43402297694502,0,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,0,1.38134921352481,2.3218396401599,4.33127689001751,1.30137480043828,0.674338760312407,1.20505514941741,2.09558548191549,2.17879444092406,1.89816495288877,1.48314438976181,2.15843611637881,1.92373578473195,0.738155454624648,5.60967095213783,0.4115740113314,2.94017422771084,0,0.982827216677626,1.77236972004421,0,0.614942192715568,0.343135620597051,1.53650399572076,35.9685610424383,1.50793458617446,0.648119116109707,11.4032906858614,1.03993478527958,0,0.115930404975077,1.40890433082986,1.29929802984966,0.462985512576611,0.380508304469197,0.790204397959275,0,2.70838706696137,2.34004265139238,2.97262324577457,0,0.671928512795438,0.567100388969546,3.76145795351963,4.65014301622339,1.15014803749563,0,0.088048434013226,0.414656231081544,1.00883967391873,1.8936365013957,0.063497894292169,0,1.17217447210047,3.4214489204541,0.205654985406647,0.300343057843917,0,0.224262168690721,0,0.5867062865676,4.00742318849111,0,3.381211010224,1.32969058292435,0,1.02882949704857,5.67396528093113,1.3321108950805,0.714889968290738,0,0,2.60588947434988,1.06617584622764,0,0.904318131178758,2.61460037580088,1.69954085009497,2.43247561282381,0.502257091432126,0,2.63587341040741,0,1.42636905040718,2.17171960001369,2.26023954805422,0.358121926479791,0,0,0.431255149719035,0.256686072559497,0,0,0.773288812777695,0.335032530668698,0,0.749007023947182,0,1.24324654030811,0.12269149171914,0,0.813795071099207,0.831883446123229,1.42743191037729,1.26161932027148,2.45996971484698,1.50473049863859,2.27407504055985,0,4.64957918974806,4.79359838208428,1.39013783148933,0.391602314925481,0.343143423810856,0,0.215714200818617,0.213455115606889,3.03127571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| |||
|short_description=p3@ASB1 | |||
}} |
Revision as of 09:30, 21 January 2014
Short description: | p3@ASB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ASB1_5end |
Coexpression cluster: | C4206_Smooth_Keratinocyte_mesenchymal_Fibroblast_Bronchial_mucinous_Tracheal |
Association with transcript: | 13bp_to_ENST00000463352_5end |
EntrezGene: | ASB1 |
HGNC: | 16011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.64e-16 | 32 |
muscle cell | 3.41e-15 | 55 |
muscle precursor cell | 4.40e-15 | 58 |
myoblast | 4.40e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.40e-15 | 58 |
fibroblast | 9.31e-15 | 76 |
smooth muscle cell | 3.36e-14 | 43 |
smooth muscle myoblast | 3.36e-14 | 43 |
embryonic cell | 3.82e-14 | 250 |
mesodermal cell | 6.24e-13 | 121 |
somatic stem cell | 6.50e-13 | 433 |
multi fate stem cell | 5.02e-12 | 427 |
electrically responsive cell | 5.93e-12 | 61 |
electrically active cell | 5.93e-12 | 61 |
stem cell | 7.74e-12 | 441 |
cardiocyte | 2.20e-10 | 16 |
aortic smooth muscle cell | 1.56e-07 | 10 |
preadipocyte | 5.02e-07 | 12 |
respiratory epithelial cell | 8.47e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.54e-09 | 14 |