FFCP PHASE1:Hg19::chr21:46347694..46347715,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505746 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_BC062315_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_LOC100505746_5end | |||
|id=chr21:46347694..46347715,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.66e-53!140;CL:0002087!5.78e-48!119;CL:0000037!5.31e-43!172;CL:0000566!5.31e-43!172;CL:0002031!1.99e-41!124;CL:0002032!1.25e-39!165;CL:0000837!1.25e-39!165;CL:0000988!5.72e-38!182;CL:0000542!7.86e-27!53;CL:0000051!7.86e-27!53;CL:0000838!1.09e-26!52;CL:0000766!1.09e-20!76;CL:0002009!2.26e-19!65;CL:0002057!2.68e-19!42;CL:0002194!1.88e-18!63;CL:0000576!1.88e-18!63;CL:0000040!1.88e-18!63;CL:0000559!1.88e-18!63;CL:0000860!5.43e-17!45;CL:0000791!6.81e-17!18;CL:0000789!6.81e-17!18;CL:0002420!6.81e-17!18;CL:0002419!6.81e-17!18;CL:0000790!6.81e-17!18;CL:0000557!3.93e-16!71;CL:0000763!3.84e-15!112;CL:0000049!3.84e-15!112;CL:0000839!8.40e-15!70;CL:0000084!1.06e-13!25;CL:0000827!1.06e-13!25;CL:0000945!8.29e-12!24;CL:0000826!8.29e-12!24;CL:0000625!3.90e-11!11;CL:0002393!1.16e-07!9;CL:0002397!1.16e-07!9;CL:0000094!2.39e-07!8;CL:0000236!5.37e-07!14;CL:0000624!8.47e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.20e-31;18!CL:0000789;2.20e-31;18!CL:0002419;2.20e-31;18!CL:0000084;4.48e-23;25!CL:0000542;5.03e-22;53!CL:0000625;4.03e-20;11!CL:0002087;5.57e-17;104!CL:0000945;5.31e-15;24!CL:0000094;8.52e-13;8!CL:0000624;9.65e-12;6!CL:0000738;7.94e-11;136!CL:0000236;1.17e-10;13!CL:0002393;2.22e-09;6!CL:0002397;2.22e-09;6!CL:0000766;3.28e-09;69!CL:0000081;7.49e-09;11!CL:0000576;1.33e-08;48!CL:0000473;5.78e-08;39!CL:0000234;5.78e-08;39!CL:0000860;7.92e-08;33!CL:0002057;7.92e-08;33!CL:0000988;2.54e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.53e-57,136;CL:0002087,2.53e-53,115;CL:0000037,1.33e-46,168;CL:0002031,1.07e-44,120;CL:0002032,4.09e-43,161;CL:0000837,4.09e-43,161;CL:0000988,4.75e-43,177;CL:0000838,2.51e-41,52;CL:0000542,2.66e-40,53;CL:0000051,2.66e-40,53;CL:0000791,2.28e-31,18;CL:0000789,2.28e-31,18;CL:0002420,2.28e-31,18;CL:0002419,2.28e-31,18;CL:0000790,2.28e-31,18;CL:0000084,4.14e-23,25;CL:0000827,4.14e-23,25;CL:0000625,3.80e-20,11;CL:0000766,3.44e-18,72;CL:0000473,7.11e-18,48;CL:0000234,7.11e-18,48;CL:0000860,5.86e-17,42;CL:0002057,5.86e-17,42;CL:0000945,4.37e-15,24;CL:0000826,4.37e-15,24;CL:0002393,2.08e-13,9;CL:0002397,2.08e-13,9;CL:0000094,8.40e-13,8;CL:0002194,9.52e-13,59;CL:0000576,9.52e-13,59;CL:0000040,9.52e-13,59;CL:0000559,9.52e-13,59;CL:0002009,4.27e-12,61;CL:0000624,9.67e-12,6;CL:0000763,2.25e-11,108;CL:0000049,2.25e-11,108;CL:0000839,1.20e-10,66;CL:0000134,1.34e-10,354;CL:0000557,2.19e-10,67;CL:0002320,5.17e-10,361;CL:0000236,8.23e-10,14;CL:0000081,7.42e-09,11;CL:0000219,5.48e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000790;2.20e-31;18!CL:0000051;5.03e-22;53!CL:0002057;3.84e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.90e-22!102;UBERON:0003061!4.90e-22!102;UBERON:0002193!1.69e-19!112;UBERON:0002371!3.86e-13!80;UBERON:0001474!3.25e-12!86;UBERON:0002405!2.49e-11!115;UBERON:0004765!9.68e-10!101;UBERON:0001434!9.68e-10!101;UBERON:0000178!6.38e-08!15;UBERON:0000179!6.38e-08!15;UBERON:0000463!6.38e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.73e-15;15!UBERON:0000179;1.73e-15;15!UBERON:0000463;1.73e-15;15!UBERON:0002390;1.41e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.40e-23,98;UBERON:0003061,2.40e-23,98;UBERON:0002193,4.22e-21,108;UBERON:0000178,1.90e-15,15;UBERON:0000179,1.90e-15,15;UBERON:0000463,1.90e-15,15;UBERON:0002405,1.16e-11,93;UBERON:0002384,3.21e-09,371;UBERON:0002371,3.83e-09,76;UBERON:0004177,4.46e-08,7;UBERON:0005057,4.46e-08,7;UBERON:0001474,5.63e-08,82;UBERON:0004765,2.50e-07,90;UBERON:0002370,2.63e-07,4;UBERON:0005058,2.63e-07,4;UBERON:0009113,2.63e-07,4;UBERON:0003295,2.63e-07,4;UBERON:0005562,2.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66121775062503,3.20192298854788,4.48651453487972,4.72037132218685,5.37361157336098,3.2511385896376,0,0,0,0.232401601740905,0.284338464974843,0,3.87796785972314,4.8130667392834,3.47217393145363,0.223915474239924,0.32389366601898,0,0.436194716338694,0.377875943688809,0.242584061187816,0.929716147622738,0.822335776043652,0.929119112685311,1.43846196161075,2.0492856522328,1.18241114944293,1.03423704220986,1.29096936716765,1.35426486594342,1.12945403725563,0.272906150057846,0.224723484445085,0.918251677112708,1.28371610830437,1.27867425159808,0.329851300186716,0.997318288108159,1.27867425159808,0,0,1.86846674698672,0.75374599577023,2.08593167368081,0.65156653411535,1.21079900526674,1.10483290796269,0,3.38008458099107,3.61427309940574,4.82214884669265,2.3589012540764,3.90459921387916,4.50031642751824,3.13514018115373,3.77941686678271,6.75857368929146,1.75996244461323,4.36910889009705,7.11607403090844,0.853460445133014,4.00395987036012,3.4485146397269,3.96626923670917,4.77026877267682,5.69212969109448,3.52342313622563,2.29363936875137,0,0,0,13.3762643677406,20.8295704257057,12.3360899399706,7.35620579718984,12.0591238654428,27.9334205383493,23.3792074089494,6.57321695622524,6.77593587192126,12.1843642020992,14.8942125070759,7.17311390463781,11.4452225852693,8.05745732558013,12.712100818149,10.1431080007268,16.6080950741508,32.639981026945,28.2245914273437,5.66546713487831,20.3106861609018,25.7720584111972,31.1214221183989,15.9282707162048,19.5325036156926,14.2567806667256,8.58278178743305,8.95906278080929,12.4930726552346,18.9421801635213,15.6014319414999,12.2980113367087,11.7673686144743,10.7170058873271,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0.696518949197069,0.664789802594326,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0.653638332277218,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,10.5951143859516,0,0,0.658501712451753,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.702012795417713,1.18904929830983,1.87467667973554,0.16798212819886,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0.205476322550383,0.179060963239896,2.01753259188349,9.06341496928865,9.70324086867828,7.44389610422541,0,0,0,0,0,6.74106321552464,8.97484377612075,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09779314940704,6.68714022537712,8.11129439306177,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0.366277859273374,0.247528499761764,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,7.10426652925037,7.64637207142375,12.5322381178316,8.09988036556483,6.58179636937911,6.48473311192717,7.02040868409549,11.1037524681198,0,0,0,0.185803175125719,0,1.63626239701352,0.637705090915289,0.199579371432817,1.34053759092657,4.02179807175377,0,0,7.30350972906215,0,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0.671028323677248,0,0.586164286206121,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,2.21027132424918,0,0.102268682502155,2.09244169283818,0,0.539210106883961,0.358042349351218,0,0.197286811273867,16.7638164642858,0,0,0,0,0,0.0874599999961957,0,0.568967241427498,0.508507300585533,0,0,0.874813840149763,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0,0,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0.157566364614447,0.247247575143499,0.202210631562555,0,3.38693328263138,0,0,0,0,0,0.899895566206002,0.77380195455795,0.0607495566580247,0,0.236417121897595,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.427149650270779,0.157204305099666,1.65695622138878,0.992332043623902,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.33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| |||
|short_description=p3@LOC100505746 | |||
}} |
Revision as of 14:14, 21 January 2014
Short description: | p3@LOC100505746 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100505746_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -48bp_to_BC062315_5end |
EntrezGene: | LOC100505746 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.40e-23 | 98 |
blood island | 2.40e-23 | 98 |
hemolymphoid system | 4.22e-21 | 108 |
blood | 1.90e-15 | 15 |
haemolymphatic fluid | 1.90e-15 | 15 |
organism substance | 1.90e-15 | 15 |
immune system | 1.16e-11 | 93 |
connective tissue | 3.21e-09 | 371 |
bone marrow | 3.83e-09 | 76 |
hemopoietic organ | 4.46e-08 | 7 |
immune organ | 4.46e-08 | 7 |
bone element | 5.63e-08 | 82 |
skeletal element | 2.50e-07 | 90 |
thymus | 2.63e-07 | 4 |
hemolymphoid system gland | 2.63e-07 | 4 |
thymic region | 2.63e-07 | 4 |
pharyngeal gland | 2.63e-07 | 4 |
thymus primordium | 2.63e-07 | 4 |