FFCP PHASE1:Hg19::chr4:57371833..57371870,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:57371833..57371870,+ | |||
|id=chr4:57371833..57371870,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.97e-08;3!CL:0000064;7.32e-08;3!CL:0000067;7.32e-08;3!CL:0005012;7.32e-08;3!CL:0002304;7.32e-08;3!CL:0000708;1.65e-07;3!CL:0002319;3.09e-07;25!CL:0000540;6.62e-07;6!CL:0000404;6.62e-07;6!CL:0000327;9.22e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.74e-11,8;CL:0000064,5.71e-08,3;CL:0000067,5.71e-08,3;CL:0005012,5.71e-08,3;CL:0002304,5.71e-08,3;CL:0002586,9.88e-08,3;CL:0000708,1.58e-07,3;CL:0002319,2.86e-07,25;CL:0000540,5.51e-07,6;CL:0000031,5.51e-07,6;CL:0000404,5.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.62e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.49e-23!86;UBERON:0002346!2.23e-22!90;UBERON:0003075!2.31e-22!86;UBERON:0007284!2.31e-22!86;UBERON:0000073!7.59e-22!94;UBERON:0001016!7.59e-22!94;UBERON:0000924!7.96e-21!173;UBERON:0006601!7.96e-21!173;UBERON:0001017!9.47e-21!82;UBERON:0004121!1.51e-20!169;UBERON:0003056!1.37e-18!61;UBERON:0000033!5.16e-18!123;UBERON:0000153!5.17e-18!129;UBERON:0007811!5.17e-18!129;UBERON:0002616!5.58e-18!59;UBERON:0001049!1.62e-16!57;UBERON:0005068!1.62e-16!57;UBERON:0006241!1.62e-16!57;UBERON:0007135!1.62e-16!57;UBERON:0000119!4.87e-16!312;UBERON:0000955!5.32e-16!69;UBERON:0006238!5.32e-16!69;UBERON:0000483!7.93e-15!309;UBERON:0002780!2.90e-14!41;UBERON:0001890!2.90e-14!41;UBERON:0006240!2.90e-14!41;UBERON:0001869!6.01e-14!32;UBERON:0003080!1.31e-13!42;UBERON:0001893!1.93e-13!34;UBERON:0002020!3.72e-13!34;UBERON:0003528!3.72e-13!34;UBERON:0002791!8.24e-13!33;UBERON:0000956!2.12e-12!25;UBERON:0000203!2.12e-12!25;UBERON:0001950!8.19e-12!20;UBERON:0002619!1.97e-11!22;UBERON:0000481!5.12e-11!347;UBERON:0007023!2.86e-09!115;UBERON:0000475!2.18e-08!365;UBERON:0007625!1.95e-07!11;UBERON:0000477!8.76e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.81e-16;11!UBERON:0001950;3.39e-12;20!UBERON:0000956;3.73e-11;25!UBERON:0000203;3.73e-11;25!UBERON:0002619;6.52e-11;22!UBERON:0000019;1.13e-10;19!UBERON:0000047;1.13e-10;19!UBERON:0004088;1.13e-10;19!UBERON:0010230;1.13e-10;19!UBERON:0000970;4.95e-10;20!UBERON:0000488;8.16e-10;4!UBERON:0002104;1.87e-09;21!UBERON:0001456;1.87e-09;21!UBERON:0001893;9.16e-09;34!UBERON:0001869;1.12e-08;32!UBERON:0003528;1.82e-08;34!UBERON:0002020;1.82e-08;34!UBERON:0000020;1.88e-08;23!UBERON:0001032;5.16e-08;24!UBERON:0004456;5.16e-08;24!UBERON:0001781;5.97e-08;3!UBERON:0001782;5.97e-08;3!UBERON:0001778;7.32e-08;3!UBERON:0001775;7.32e-08;3!UBERON:0003210;1.65e-07;3!UBERON:0002791;1.73e-07;32!UBERON:0001801;1.93e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.48e-18,86;UBERON:0003075,1.11e-17,82;UBERON:0007284,1.11e-17,82;UBERON:0007625,4.12e-16,11;UBERON:0003056,4.52e-16,61;UBERON:0001017,1.99e-15,81;UBERON:0010371,1.22e-14,104;UBERON:0001016,3.49e-13,89;UBERON:0004121,1.96e-12,171;UBERON:0000924,1.96e-12,171;UBERON:0006601,1.96e-12,171;UBERON:0001950,3.98e-12,20;UBERON:0001049,1.18e-11,56;UBERON:0005068,1.18e-11,56;UBERON:0006241,1.18e-11,56;UBERON:0007135,1.18e-11,56;UBERON:0000073,3.11e-11,53;UBERON:0002616,3.11e-11,53;UBERON:0000956,3.94e-11,25;UBERON:0000203,3.94e-11,25;UBERON:0002619,7.53e-11,22;UBERON:0010314,1.43e-10,132;UBERON:0000019,7.51e-10,20;UBERON:0000047,7.51e-10,20;UBERON:0010312,7.51e-10,20;UBERON:0004088,7.51e-10,20;UBERON:0010230,7.51e-10,20;UBERON:0003072,7.51e-10,20;UBERON:0004128,7.51e-10,20;UBERON:0003071,7.51e-10,20;UBERON:0000955,1.06e-09,68;UBERON:0006238,1.06e-09,68;UBERON:0000488,1.07e-09,4;UBERON:0001869,1.22e-09,32;UBERON:0000970,2.77e-09,21;UBERON:0002104,2.77e-09,21;UBERON:0001893,6.48e-09,34;UBERON:0003528,7.38e-09,34;UBERON:0002020,7.38e-09,34;UBERON:0001456,9.09e-09,22;UBERON:0002780,2.88e-08,41;UBERON:0001890,2.88e-08,41;UBERON:0003080,2.88e-08,41;UBERON:0006240,2.88e-08,41;UBERON:0002791,3.52e-08,32;UBERON:0001778,5.71e-08,3;UBERON:0001775,5.71e-08,3;UBERON:0000020,7.20e-08,24;UBERON:0001032,7.20e-08,24;UBERON:0004456,7.20e-08,24;UBERON:0001782,9.88e-08,3;UBERON:0005424,9.88e-08,3;UBERON:0003210,1.58e-07,3;UBERON:0001801,2.34e-07,14;UBERON:0005085,5.72e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0,0,0,0,0,0.730310090387373,0.487932798790507,1.60057375499824,1.02000345622126,0.626909442956176,1.43117993565528,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,3.22960483268332,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0,0,0,1.12101712596307,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0.361439152384566,1.00267582127178,0.579386075843295,1.5905718941022,0.486634870302636,2.3633704291017,1.10864698731282,1.75669571386252,0.785874452986276,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.446498641420399,1.12264686313085,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.817309515567294,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0.298897361103602,1.40921398372518,0.161872944368132,0,0.816616685019573,0.859840221182376,0.206651562351531,0,0.247266929278557,1.82032272387605,0.718618141816238,0.168336113954066,0.375355559615893,0.831192346452549,0,0,0,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0.386521706326594,0.272746120590835,0,0.853815942907168,0.795178609928912,1.2781333715647,0.621966330092223,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,1.02940686179115,0.109750285408626,0,0.100528972411631,0.370353780634118,0,1.03993478527958,1.44331342025273,2.66639931442677,0.70445216541493,0.288732895522148,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.411309970813294,0.600686115687835,0,1.68196626518041,1.30788020649984,1.0267360014933,0.129271715757778,0,0,0,0,1.28603687131071,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,11.4109524032575,0,0.205476322550383,0.358121926479791,0,0,0,0,2.54094624222463,7.8083912314573,1.54657762555539,3.68535783735567,4.46557126157214,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,1.03985430765404,0,0,0,0,0,0,0,0.368738337083406,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.246381468041427,0,0,0,0,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0.385076685522074,1.56869953835371,0,0.73886140225013,0,0.340187410553031,0.863663664408557,0,0.270946437543853,0,0,0,2.0148727924996,0.438519753291869,0.522870902049801,1.02580050046556,3.28014645699706,1.30151357865721,0.103041011647722,0,0,0.574265537996172,1.95018073810956,0,0.193341436584244,2.00263202249038,1.07452572308291,0.964856007391714,1.18162269355101,0.725083469571143,1.10794615640931,0.356128142586949,0,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0.744316738719335,1.2655176988749,0.190630193923825,0,0,0.318203247925937,0,0.719489830333259,0.823611089208164,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,1.43411352204052,0.589494246078727,0,0,0.211107635297664,0.329294892959902,0,0.699869440489966,0.384888450902048,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0.5745161103971,0,9.73865820823666,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0.18714054040822,0.439524537815682,0,0,0,0,0,0,5.96488588659779,0.703347082052564,0,0,0,0.19924798825107,0,1.51159648712566,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,1.04174996959975,0.885741385813839,0.361789315876224,0,0.331737779793674,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.353830258013357,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0.789168805698781,0,5.50930970934882,0.63186579628488,0,0,0,0,0,1.19472429772959,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.290967049465258,0.0882561266915003,0,0,0,1.51945910294109,0.586654148204409,0,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,1.27746588066972,0.429765441419957,0,0,0.229160424011684,0.717873024576814,0,0,0,0.53746777989381,0.360299883542404,0,0,0,0,0,0,0,0.817220436669454,0.321506296930038,0.275078873194468,1.24632101408756,0,0,0.789744236554321,0,0,0.262272940674991,0,0,0,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0,0,0.328370082997356,0,1.01980882368113,0,0,1.0342636508924,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.88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| |||
|short_description=p@chr4:57371833..57371870,+ | |||
}} |
Revision as of 01:09, 22 January 2014
Short description: | p@chr4:57371833..57371870, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:57371833..57371870, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.74e-11 | 8 |
ciliated cell | 5.71e-08 | 3 |
ciliated epithelial cell | 5.71e-08 | 3 |
multi-ciliated epithelial cell | 5.71e-08 | 3 |
non-pigmented ciliary epithelial cell | 5.71e-08 | 3 |
retinal pigment epithelial cell | 9.88e-08 | 3 |
leptomeningeal cell | 1.58e-07 | 3 |
neural cell | 2.86e-07 | 25 |
neuron | 5.51e-07 | 6 |
neuroblast | 5.51e-07 | 6 |
electrically signaling cell | 5.51e-07 | 6 |