FFCP PHASE1:Hg19::chr4:95691354..95691357,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:95691354..95691357,+ | |||
|id=chr4:95691354..95691357,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.28e-23;1!UBERON:0006215;1.21e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.59e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.90e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.53e-16!57;UBERON:0005068!4.53e-16!57;UBERON:0006241!4.53e-16!57;UBERON:0007135!4.53e-16!57;UBERON:0002616!1.02e-13!59;UBERON:0000073!6.80e-13!94;UBERON:0001016!6.80e-13!94;UBERON:0003075!8.32e-13!86;UBERON:0007284!8.32e-13!86;UBERON:0001017!1.66e-12!82;UBERON:0002346!6.46e-12!90;UBERON:0000955!6.62e-12!69;UBERON:0006238!6.62e-12!69;UBERON:0005743!1.31e-11!86;UBERON:0001893!1.32e-10!34;UBERON:0007023!1.98e-10!115;UBERON:0002780!1.17e-09!41;UBERON:0001890!1.17e-09!41;UBERON:0006240!1.17e-09!41;UBERON:0002791!1.32e-09!33;UBERON:0003080!2.43e-09!42;UBERON:0003076!7.37e-09!15;UBERON:0003057!7.37e-09!15;UBERON:0001869!2.44e-08!32;UBERON:0004121!3.56e-08!169;UBERON:0000956!3.62e-08!25;UBERON:0000203!3.62e-08!25;UBERON:0000924!8.62e-08!173;UBERON:0006601!8.62e-08!173;UBERON:0002020!9.12e-08!34;UBERON:0003528!9.12e-08!34;UBERON:0001896!1.22e-07!3;UBERON:0005290!1.22e-07!3;UBERON:0010096!1.22e-07!3;UBERON:0003056!4.12e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;3.28e-23;1!UBERON:0002360;2.59e-12;2!UBERON:0006562;2.59e-12;2!UBERON:0002702;2.59e-12;2!UBERON:0000094;2.59e-12;2!UBERON:0010743;2.59e-12;2!UBERON:0001896;1.21e-08;3!UBERON:0001870;1.21e-08;3!UBERON:0005290;1.21e-08;3!UBERON:0000956;2.59e-08;25!UBERON:0000203;2.59e-08;25!UBERON:0004733;2.75e-08;12!UBERON:0002028;2.75e-08;12!UBERON:0004732;1.02e-07;13!UBERON:0000073;1.29e-07;53!UBERON:0002616;1.29e-07;53!UBERON:0002791;6.16e-07;32!UBERON:0001869;6.16e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,5.13e-23,1;UBERON:0007645,5.13e-23,1;UBERON:0007647,5.13e-23,1;UBERON:0010115,5.13e-23,1;UBERON:0002702,2.07e-12,2;UBERON:0002360,3.24e-12,2;UBERON:0000094,3.24e-12,2;UBERON:0010743,3.24e-12,2;UBERON:0000073,2.17e-10,53;UBERON:0002616,2.17e-10,53;UBERON:0001049,7.51e-10,56;UBERON:0005068,7.51e-10,56;UBERON:0006241,7.51e-10,56;UBERON:0007135,7.51e-10,56;UBERON:0001017,1.52e-09,81;UBERON:0001870,1.04e-08,3;UBERON:0001016,1.32e-08,89;UBERON:0001896,1.51e-08,3;UBERON:0005290,1.51e-08,3;UBERON:0010096,1.51e-08,3;UBERON:0000956,2.40e-08,25;UBERON:0000203,2.40e-08,25;UBERON:0004733,3.07e-08,12;UBERON:0002028,3.07e-08,12;UBERON:0007277,3.07e-08,12;UBERON:0000955,4.81e-08,68;UBERON:0006238,4.81e-08,68;UBERON:0004732,1.13e-07,13;UBERON:0010371,1.56e-07,104;UBERON:0003075,8.50e-07,82;UBERON:0007284,8.50e-07,82;UBERON:0003076,9.09e-07,15;UBERON:0003057,9.09e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71741592278634,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0.413509717453592,0,0.435050081742686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0.591095237907095,0,0.10893846351899,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,3.62972148145992,0,1.20054501294127,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0.121499113316049,0,0,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39521573038061,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.122026264901963,0,1.14681839138014,0.110929051536852,0.372578417648301,0.691743174681154,0,0,1.42732666772484,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0.295710299979268,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0.558644917973244,0,0,0.80057074828547,0,0,0,0,0,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,1.78867398695433,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.549451649953598,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0.240724100067505,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0.267964130156178,0.829169439458779,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.855690109280065,0,0,0,0 | |||
|short_description=p@chr4:95691354..95691357,+ | |||
}} |
Revision as of 02:20, 22 January 2014
Short description: | p@chr4:95691354..95691357, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:95691354..95691357, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dura mater | 5.13e-23 | 1 |
future meninx | 5.13e-23 | 1 |
ectomeninx | 5.13e-23 | 1 |
future dura mater | 5.13e-23 | 1 |
middle frontal gyrus | 2.07e-12 | 2 |
meninx | 3.24e-12 | 2 |
membrane organ | 3.24e-12 | 2 |
meningeal cluster | 3.24e-12 | 2 |
regional part of nervous system | 2.17e-10 | 53 |
regional part of brain | 2.17e-10 | 53 |
neural tube | 7.51e-10 | 56 |
neural rod | 7.51e-10 | 56 |
future spinal cord | 7.51e-10 | 56 |
neural keel | 7.51e-10 | 56 |
central nervous system | 1.52e-09 | 81 |
frontal cortex | 1.04e-08 | 3 |
nervous system | 1.32e-08 | 89 |
medulla oblongata | 1.51e-08 | 3 |
myelencephalon | 1.51e-08 | 3 |
future myelencephalon | 1.51e-08 | 3 |
cerebral cortex | 2.40e-08 | 25 |
pallium | 2.40e-08 | 25 |
segmental subdivision of hindbrain | 3.07e-08 | 12 |
hindbrain | 3.07e-08 | 12 |
presumptive hindbrain | 3.07e-08 | 12 |
brain | 4.81e-08 | 68 |
future brain | 4.81e-08 | 68 |
segmental subdivision of nervous system | 1.13e-07 | 13 |
ecto-epithelium | 1.56e-07 | 104 |
neural plate | 8.50e-07 | 82 |
presumptive neural plate | 8.50e-07 | 82 |
posterior neural tube | 9.09e-07 | 15 |
chordal neural plate | 9.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.90e-12 | 2 |