FFCP PHASE1:Hg19::chr8:21646290..21646308,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4244 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJ44 | |||
|association_with_transcript=0bp_to_ENST00000519195_5end | |||
|coexpression_cluster_id=C1759 | |||
|description=CAGE_peak_4_at_GFRA2_5end | |||
|id=chr8:21646290..21646308,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.71e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.04e-09;82!UBERON:0007297;3.66e-09;2 | |||
|ontology_enrichment_disease=DOID:171!2.34e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.01e-20;10!DOID:3095;1.04e-08;22!DOID:2994;1.04e-08;22!DOID:169;3.89e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.57e-20,10;DOID:3095,9.36e-09,22;DOID:2994,9.36e-09,22;DOID:169,4.23e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-54!115;UBERON:0001049!3.50e-33!57;UBERON:0005068!3.50e-33!57;UBERON:0006241!3.50e-33!57;UBERON:0007135!3.50e-33!57;UBERON:0002346!1.45e-32!90;UBERON:0001893!2.88e-31!34;UBERON:0002020!3.96e-31!34;UBERON:0003528!3.96e-31!34;UBERON:0001017!2.53e-30!82;UBERON:0002619!2.71e-30!22;UBERON:0000073!2.74e-30!94;UBERON:0001016!2.74e-30!94;UBERON:0002791!8.14e-30!33;UBERON:0005743!8.28e-30!86;UBERON:0001869!4.35e-29!32;UBERON:0000955!2.18e-28!69;UBERON:0006238!2.18e-28!69;UBERON:0002616!2.48e-28!59;UBERON:0001950!3.25e-28!20;UBERON:0002780!4.27e-28!41;UBERON:0001890!4.27e-28!41;UBERON:0006240!4.27e-28!41;UBERON:0003075!7.79e-28!86;UBERON:0007284!7.79e-28!86;UBERON:0003080!3.40e-27!42;UBERON:0000956!6.69e-26!25;UBERON:0000203!6.69e-26!25;UBERON:0003056!3.73e-22!61;UBERON:0000153!5.16e-21!129;UBERON:0007811!5.16e-21!129;UBERON:0000924!2.28e-20!173;UBERON:0006601!2.28e-20!173;UBERON:0000033!7.62e-19!123;UBERON:0004121!3.19e-17!169;UBERON:0001871!1.71e-12!7;UBERON:0000062!1.47e-09!511;UBERON:0000922!3.55e-09!612;UBERON:0002021!5.44e-09!5;UBERON:0001872!6.80e-09!5;UBERON:0002050!1.05e-08!605;UBERON:0005423!1.05e-08!605;UBERON:0000468!1.15e-08!659;UBERON:0000064!2.26e-08!219;UBERON:0000923!2.84e-08!604;UBERON:0005291!2.84e-08!604;UBERON:0006598!2.84e-08!604;UBERON:0002532!2.84e-08!604;UBERON:0000025!1.39e-07!194;UBERON:0000477!1.65e-07!286;UBERON:0000200!1.89e-07!6;UBERON:0000349!2.25e-07!5;UBERON:0003076!2.67e-07!15;UBERON:0003057!2.67e-07!15;UBERON:0002420!6.83e-07!9;UBERON:0007245!6.83e-07!9;UBERON:0010009!6.83e-07!9;UBERON:0010011!6.83e-07!9;UBERON:0000454!6.83e-07!9;UBERON:0002308!7.12e-07!9;UBERON:0000125!7.12e-07!9;UBERON:0000481!7.34e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.11e-51;20!UBERON:0002619;7.96e-47;22!UBERON:0000956;6.06e-41;25!UBERON:0000203;6.06e-41;25!UBERON:0001869;1.24e-34;32!UBERON:0001893;4.59e-32;34!UBERON:0003528;5.72e-32;34!UBERON:0002020;5.72e-32;34!UBERON:0002791;2.11e-30;32!UBERON:0002021;1.61e-20;5!UBERON:0001872;2.62e-20;5!UBERON:0002780;3.93e-20;41!UBERON:0001890;3.93e-20;41!UBERON:0002346;1.73e-17;4!UBERON:0000923;1.73e-17;4!UBERON:0010316;1.73e-17;4!UBERON:0005291;1.73e-17;4!UBERON:0000200;3.31e-17;6!UBERON:0002050;5.23e-14;5!UBERON:0005423;5.23e-14;5!UBERON:0000073;3.79e-13;53!UBERON:0002616;3.79e-13;53!UBERON:0000955;1.99e-11;68!UBERON:0001017;7.88e-11;75!UBERON:0001016;7.08e-10;83!UBERON:0001871;2.56e-09;6!UBERON:0000922;4.17e-09;49!UBERON:0002771;8.93e-09;2!UBERON:0000013;1.71e-08;5!UBERON:0002410;1.71e-08;5!UBERON:0007023;8.12e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.34e-51,20;UBERON:0002619,9.45e-47,22;UBERON:0000956,7.04e-41,25;UBERON:0000203,7.04e-41,25;UBERON:0001869,1.77e-39,32;UBERON:0001893,5.92e-37,34;UBERON:0003528,1.12e-36,34;UBERON:0002020,1.12e-36,34;UBERON:0002791,3.81e-35,32;UBERON:0002780,5.13e-30,41;UBERON:0001890,5.13e-30,41;UBERON:0003080,5.13e-30,41;UBERON:0006240,5.13e-30,41;UBERON:0001016,6.68e-28,89;UBERON:0000955,6.74e-25,68;UBERON:0006238,6.74e-25,68;UBERON:0000073,7.91e-25,53;UBERON:0002616,7.91e-25,53;UBERON:0001017,2.89e-24,81;UBERON:0001049,2.89e-23,56;UBERON:0005068,2.89e-23,56;UBERON:0006241,2.89e-23,56;UBERON:0007135,2.89e-23,56;UBERON:0002346,5.19e-23,86;UBERON:0003056,4.69e-21,61;UBERON:0002021,2.08e-20,5;UBERON:0001872,3.66e-20,5;UBERON:0004121,3.18e-19,171;UBERON:0000924,3.18e-19,171;UBERON:0006601,3.18e-19,171;UBERON:0007023,8.94e-18,114;UBERON:0000200,3.45e-17,6;UBERON:0003075,3.74e-16,82;UBERON:0007284,3.74e-16,82;UBERON:0010314,3.45e-14,132;UBERON:0011216,8.99e-14,223;UBERON:0010371,9.69e-12,104;UBERON:0001871,3.01e-09,6;UBERON:0002771,9.71e-09,2;UBERON:0000013,1.89e-08,5;UBERON:0002410,1.89e-08,5;UBERON:0000025,4.65e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,2.46307021663917,0,1.28787783817093,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,2.31920245404628,1.99613798001194,0,0,0,0,0,0,0,1.16641845353302,0.173624994933292,0,0.241192877250816,0,0.552896299656123,0.295547618953547,1.97446857438575,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0.394584402849391,1.20990716048664,0.91821828489147,0.884612114798832,0,0.103688191397247,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0.678923115418936,0,0,0,0,1.83601308272048,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0.671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,1.39723980313457,0,0.157611414598396,0.681909645754975,0,0,0,2.1440859791201,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,1.32506888912221,0.387848869084652,1.05786081394152,0,0,0.106787412567695,1.25763444079733,0.414239055347196,1.9846640872478,0,0,0,0,0,0.306345576763462,0,0,0,1.09823638411767,2.754200475543,0,0.110929051536852,0.558867626472451,0.138348634936231,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,1.86623178009892,6.39471856518258,3.01909471910709,0,0,2.88545300921843,7.4401222035589,11.5260260760872,2.23457967189298,0,0,0,0,0,1.09189682663981,1.41696576325585,1.11743701340006,2.66651273512982,2.01657356977374,2.6971328461045,2.09918339321406,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,2.22874029240702,1.56215619722769,1.44680757550829,2.02930592620502,1.09394961803644,0.548257766857182,0.992422356778588,1.58284119923659,0,0,0,0,0,0.177404740325278,0,0,0.543757863814654,3.02554758389106,0,0,0,0.314231179832004,0,1.82631744101899,0.215927591218621,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.231522474323834,0.655678681511872,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.845855261818682,2.2560260790752,0,0,0,0,0.730336388246517,0,0.430018749454354,0,2.3117106664911,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0.639701945702943,0.714193294391221,0.193766729508018,0.0620747142958579,0,3.75518233841173,2.82964064541507,0,1.02669990325584,0.0673520530145875,0.286888821570705,0.665320713092027,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0.402547587182052,0 | |||
|short_description=p4@GFRA2 | |||
}} |
Revision as of 20:59, 22 January 2014
Short description: | p4@GFRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GFRA2_5end |
Coexpression cluster: | C1759_neuroectodermal_neuroblastoma_peripheral_occipital_postcentral_paracentral_parietal |
Association with transcript: | 0bp_to_ENST00000519195_5end |
EntrezGene: | GFRA2 |
HGNC: | 4244 |
UniProt: | E5RJ44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.57e-20 | 10 |
germ cell and embryonal cancer | 9.36e-09 | 22 |
germ cell cancer | 9.36e-09 | 22 |
neuroendocrine tumor | 4.23e-07 | 6 |