FFCP PHASE1:Hg19::chr10:127835660..127835693,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:127835660..127835693,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr10:127835660..127835693,+ | |description=CAGE_peak_at_chr10:127835660..127835693,+ | ||
|id=chr10:127835660..127835693,+ | |id=chr10:127835660..127835693,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.58e-90!5;CL:0000457!2.58e-90!5;CL:0002191!2.58e-90!5;CL:0000097!2.58e-90!5;CL:0000831!2.58e-90!5;CL:0002028!2.58e-90!5;CL:0000163!2.26e-50!9;CL:0000767!6.22e-25!3;CL:0000151!4.11e-13!35;CL:0000766!3.03e-11!76;CL:0000094!5.54e-10!8;CL:0000763!1.54e-07!112;CL:0000049!1.54e-07!112;CL:0000081!1.67e-07!11 | |ontology_enrichment_celltype=CL:0002274!2.58e-90!5;CL:0000457!2.58e-90!5;CL:0002191!2.58e-90!5;CL:0000097!2.58e-90!5;CL:0000831!2.58e-90!5;CL:0002028!2.58e-90!5;CL:0000163!2.26e-50!9;CL:0000767!6.22e-25!3;CL:0000151!4.11e-13!35;CL:0000766!3.03e-11!76;CL:0000094!5.54e-10!8;CL:0000763!1.54e-07!112;CL:0000049!1.54e-07!112;CL:0000081!1.67e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.06e-125;5!CL:0000163;2.36e-70;9!CL:0000151;1.32e-16;36!CL:0000766;8.79e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.01e-126,5;CL:0002028,9.01e-126,5;CL:0000163,2.16e-70,9;CL:0000151,2.74e-18,36;CL:0000839,3.69e-10,66;CL:0000557,5.09e-10,67;CL:0000766,2.24e-09,72 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000941!1.88e-19!1;UBERON:0004904!1.88e-19!1;UBERON:0002464!1.88e-19!1;UBERON:0001021!1.88e-19!1;UBERON:0001785!1.88e-19!1;UBERON:0003714!2.07e-10!2;UBERON:0005162!2.07e-10!2;UBERON:0000122!2.07e-10!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.30e-40,1;UBERON:0001785,3.30e-40,1;UBERON:0002464,3.30e-40,1;UBERON:0004904,3.30e-40,1;UBERON:0001021,3.30e-40,1;UBERON:0003902,3.30e-40,1;UBERON:0005425,3.30e-40,1;UBERON:0003714,6.96e-21,2;UBERON:0005162,6.96e-21,2;UBERON:0000122,6.96e-21,2;UBERON:0001781,3.79e-11,4;UBERON:0002371,6.37e-09,76;UBERON:0001474,2.54e-08,82;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0004765,1.22e-07,90;UBERON:0002405,2.04e-07,93;UBERON:0002390,4.54e-07,98;UBERON:0003061,4.54e-07,98;UBERON:0001434,6.11e-07,100 | |||
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|short_description=p@chr10:127835660..127835693,+ | |short_description=p@chr10:127835660..127835693,+ | ||
}} | }} |
Latest revision as of 11:29, 23 July 2015
Short description: | p@chr10:127835660..127835693, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:127835660..127835693, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.01e-126 | 5 |
basophil mast progenitor cell | 9.01e-126 | 5 |
endocrine cell | 2.16e-70 | 9 |
secretory cell | 2.74e-18 | 36 |
myeloid lineage restricted progenitor cell | 3.69e-10 | 66 |
granulocyte monocyte progenitor cell | 5.09e-10 | 67 |
myeloid leukocyte | 2.24e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.30e-40 | 1 |
cranial nerve | 3.30e-40 | 1 |
nerve trunk | 3.30e-40 | 1 |
nerve connecting eye with brain | 3.30e-40 | 1 |
nerve | 3.30e-40 | 1 |
retinal neural layer | 3.30e-40 | 1 |
presumptive neural retina | 3.30e-40 | 1 |
neural tissue | 6.96e-21 | 2 |
multi cell component structure | 6.96e-21 | 2 |
neuron projection bundle | 6.96e-21 | 2 |
layer of retina | 3.79e-11 | 4 |
bone marrow | 6.37e-09 | 76 |
bone element | 2.54e-08 | 82 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
skeletal element | 1.22e-07 | 90 |
immune system | 2.04e-07 | 93 |
hematopoietic system | 4.54e-07 | 98 |
blood island | 4.54e-07 | 98 |
skeletal system | 6.11e-07 | 100 |