FFCP PHASE1:Hg19::chr10:97667581..97667677,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:97667581..97667677,- to FFCP PHASE1:Hg19::chr10:97667581..97667677,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000414006,ENST00000427300,ENST00000452942_5end | |||
|cluster_id=chr10:97667581..97667677,- | |||
|description=CAGE_peak_1_at_ENST00000414006_5end,CAGE_peak_1_at_ENST00000427300_5end,CAGE_peak_1_at_ENST00000452942_5end | |||
|id=chr10:97667581..97667677,- | |||
|ontology_enrichment_celltype=CL:0000945!9.18e-07!24;CL:0000826!9.18e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.74e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.15e-07,24;CL:0000826,9.15e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!6.76e-12!31;DOID:2531!1.52e-11!51;DOID:0060083!1.52e-11!51;DOID:1240!1.30e-10!39;DOID:162!2.74e-09!235;DOID:14566!5.81e-09!239;DOID:0050686!2.82e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.50e-11;31!DOID:1240;7.04e-09;39!DOID:2531;2.11e-07;51!DOID:0060083;2.11e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.72e-12,31;DOID:2531,1.42e-11,51;DOID:0060083,1.42e-11,51;DOID:1240,1.21e-10,39;DOID:162,2.71e-09,235;DOID:14566,5.75e-09,239;DOID:0050686,2.75e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.31e-18!57;UBERON:0005068!2.31e-18!57;UBERON:0006241!2.31e-18!57;UBERON:0007135!2.31e-18!57;UBERON:0000073!2.06e-17!94;UBERON:0001016!2.06e-17!94;UBERON:0002616!2.24e-16!59;UBERON:0000955!2.31e-16!69;UBERON:0006238!2.31e-16!69;UBERON:0001017!3.80e-16!82;UBERON:0005743!7.37e-16!86;UBERON:0003080!6.07e-15!42;UBERON:0002780!1.37e-14!41;UBERON:0001890!1.37e-14!41;UBERON:0006240!1.37e-14!41;UBERON:0007023!1.29e-13!115;UBERON:0002346!1.75e-13!90;UBERON:0003075!3.76e-13!86;UBERON:0007284!3.76e-13!86;UBERON:0002020!3.61e-12!34;UBERON:0003528!3.61e-12!34;UBERON:0001893!3.63e-12!34;UBERON:0002791!1.31e-11!33;UBERON:0001869!2.14e-11!32;UBERON:0002619!4.97e-10!22;UBERON:0003056!9.95e-10!61;UBERON:0000956!2.10e-09!25;UBERON:0000203!2.10e-09!25;UBERON:0001950!4.77e-09!20;UBERON:0000924!1.71e-08!173;UBERON:0006601!1.71e-08!173;UBERON:0004121!3.77e-08!169;UBERON:0000033!1.68e-07!123;UBERON:0000153!5.02e-07!129;UBERON:0007811!5.02e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.39e-11;41!UBERON:0001890;7.39e-11;41!UBERON:0000073;7.95e-11;53!UBERON:0002616;7.95e-11;53!UBERON:0001893;9.22e-11;34!UBERON:0003528;1.90e-10;34!UBERON:0002020;1.90e-10;34!UBERON:0001869;2.43e-10;32!UBERON:0002791;2.48e-10;32!UBERON:0002619;4.15e-10;22!UBERON:0000956;1.41e-09;25!UBERON:0000203;1.41e-09;25!UBERON:0001950;4.23e-09;20!UBERON:0001017;7.31e-08;75!UBERON:0000955;1.81e-07;68!UBERON:0001016;5.33e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.24e-18,56;UBERON:0005068,5.24e-18,56;UBERON:0006241,5.24e-18,56;UBERON:0007135,5.24e-18,56;UBERON:0001016,2.37e-17,89;UBERON:0000073,5.96e-17,53;UBERON:0002616,5.96e-17,53;UBERON:0000955,5.09e-16,68;UBERON:0006238,5.09e-16,68;UBERON:0001017,8.22e-16,81;UBERON:0002780,1.36e-14,41;UBERON:0001890,1.36e-14,41;UBERON:0003080,1.36e-14,41;UBERON:0006240,1.36e-14,41;UBERON:0007023,3.44e-13,114;UBERON:0002346,2.08e-12,86;UBERON:0003528,3.59e-12,34;UBERON:0002020,3.59e-12,34;UBERON:0001893,3.61e-12,34;UBERON:0003075,4.47e-12,82;UBERON:0007284,4.47e-12,82;UBERON:0001869,2.12e-11,32;UBERON:0002791,2.28e-11,32;UBERON:0002619,4.95e-10,22;UBERON:0010371,1.60e-09,104;UBERON:0000956,2.09e-09,25;UBERON:0000203,2.09e-09,25;UBERON:0003056,3.55e-09,61;UBERON:0001950,4.75e-09,20;UBERON:0004121,1.37e-07,171;UBERON:0000924,1.37e-07,171;UBERON:0006601,1.37e-07,171;UBERON:0011216,3.52e-07,223 | |||
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| ||
|short_description=p1@ENST00000414006,p1@ENST00000427300,p1@ENST00000452942 | |||
}} | }} |
Latest revision as of 17:05, 23 July 2015
Short description: | p1@ENST00000414006, p1@ENST00000427300, p1@ENST00000452942 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000414006_5end, CAGE_peak_1_at_ENST00000427300_5end, CAGE_peak_1_at_ENST00000452942_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414006, ENST00000427300, ENST00000452942_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.15e-07 | 24 |
pro-B cell | 9.15e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.24e-18 | 56 |
neural rod | 5.24e-18 | 56 |
future spinal cord | 5.24e-18 | 56 |
neural keel | 5.24e-18 | 56 |
nervous system | 2.37e-17 | 89 |
regional part of nervous system | 5.96e-17 | 53 |
regional part of brain | 5.96e-17 | 53 |
brain | 5.09e-16 | 68 |
future brain | 5.09e-16 | 68 |
central nervous system | 8.22e-16 | 81 |
regional part of forebrain | 1.36e-14 | 41 |
forebrain | 1.36e-14 | 41 |
anterior neural tube | 1.36e-14 | 41 |
future forebrain | 1.36e-14 | 41 |
adult organism | 3.44e-13 | 114 |
neurectoderm | 2.08e-12 | 86 |
brain grey matter | 3.59e-12 | 34 |
gray matter | 3.59e-12 | 34 |
telencephalon | 3.61e-12 | 34 |
neural plate | 4.47e-12 | 82 |
presumptive neural plate | 4.47e-12 | 82 |
cerebral hemisphere | 2.12e-11 | 32 |
regional part of telencephalon | 2.28e-11 | 32 |
regional part of cerebral cortex | 4.95e-10 | 22 |
ecto-epithelium | 1.60e-09 | 104 |
cerebral cortex | 2.09e-09 | 25 |
pallium | 2.09e-09 | 25 |
pre-chordal neural plate | 3.55e-09 | 61 |
neocortex | 4.75e-09 | 20 |
ectoderm-derived structure | 1.37e-07 | 171 |
ectoderm | 1.37e-07 | 171 |
presumptive ectoderm | 1.37e-07 | 171 |
organ system subdivision | 3.52e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.72e-12 | 31 |
hematologic cancer | 1.42e-11 | 51 |
immune system cancer | 1.42e-11 | 51 |
leukemia | 1.21e-10 | 39 |
cancer | 2.71e-09 | 235 |
disease of cellular proliferation | 5.75e-09 | 239 |
organ system cancer | 2.75e-07 | 137 |