FFCP PHASE1:Hg19::chr11:102661460..102661475,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:102661460..102661475,- | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102661460..102661475,- | |||
|id=chr11:102661460..102661475,- | |||
|ontology_enrichment_celltype=CL:0000359!3.17e-36!32;CL:0000192!1.41e-32!42;CL:0000514!1.41e-32!42;CL:0000187!8.07e-27!54;CL:0000680!6.49e-25!57;CL:0000056!6.49e-25!57;CL:0000355!6.49e-25!57;CL:0000183!9.39e-24!59;CL:0000393!3.34e-23!60;CL:0000211!3.34e-23!60;CL:0000055!1.67e-20!180;CL:0002539!1.59e-19!10;CL:0000222!1.50e-18!119;CL:0000220!4.60e-11!246;CL:0002321!7.33e-11!248;CL:0000723!6.40e-10!436;CL:0000048!8.19e-10!430;CL:0000034!2.15e-09!444;CL:0000057!3.13e-09!75;CL:1000306!4.81e-09!4;CL:0002547!4.81e-09!4;CL:0002371!5.08e-09!591;CL:0002594!9.58e-09!4;CL:0002595!6.56e-08!5;CL:0000548!7.22e-08!679;CL:0000004!7.22e-08!679;CL:0000255!7.22e-08!679;CL:0002592!7.34e-08!3;CL:0000144!9.01e-08!625;CL:0000012!1.00e-07!682;CL:0002494!1.33e-07!16;CL:0002582!8.93e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.09e-43;32!CL:0000192;2.44e-24;43!CL:0002595;1.34e-22;5!CL:0002592;1.81e-21;3!CL:0002494;5.66e-20;16!CL:0000569;9.21e-16;4!CL:0002593;8.77e-15;2!CL:0000187;2.16e-13;55!CL:0002539;5.68e-11;10!CL:0000393;9.69e-11;61!CL:0000211;9.69e-11;61!CL:0002591;7.09e-08;1!CL:0002379;7.09e-08;1!CL:1000306;1.28e-07;4!CL:0002547;1.28e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.26e-45,32;CL:0000192,1.47e-32,43;CL:0000514,1.47e-32,43;CL:0000187,8.27e-25,55;CL:0000680,2.26e-23,58;CL:0000056,2.26e-23,58;CL:0000355,2.26e-23,58;CL:0002595,1.42e-22,5;CL:0000393,4.47e-22,61;CL:0000211,4.47e-22,61;CL:0002592,1.59e-21,3;CL:0002494,5.52e-20,16;CL:0000569,1.45e-15,4;CL:0000011,1.45e-15,4;CL:0002593,9.10e-15,2;CL:0000222,9.13e-13,121;CL:0002539,4.61e-11,10;CL:0002321,1.21e-08,250;CL:0002379,6.63e-08,1;CL:0002591,1.21e-07,1;CL:1000306,1.22e-07,4;CL:0002547,1.22e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;2.44e-24;43!CL:0000011;9.21e-16;4!CL:0000355;2.80e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;7.09e-08;1!DOID:3165;7.09e-08;1!DOID:0060121;7.09e-08;1!DOID:3620;7.09e-08;1!DOID:2438;7.09e-08;1!DOID:4418;7.09e-08;1!DOID:3565;7.09e-08;1!DOID:3112;7.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,4.40e-08,1;DOID:3620,6.63e-08,1;DOID:3565,6.63e-08,1;DOID:0060085,9.94e-08,1;DOID:3165,9.94e-08,1;DOID:0060121,9.94e-08,1;DOID:2438,9.94e-08,1;DOID:4418,9.94e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.73e-47!42;UBERON:0003509!1.73e-47!42;UBERON:0004572!1.73e-47!42;UBERON:0004573!1.53e-44!33;UBERON:0004571!1.53e-44!33;UBERON:0000055!4.72e-38!69;UBERON:0001981!3.94e-36!60;UBERON:0007500!3.94e-36!60;UBERON:0004537!3.94e-36!60;UBERON:0006965!3.94e-36!60;UBERON:0002049!1.23e-31!79;UBERON:0007798!1.23e-31!79;UBERON:0004872!3.65e-31!84;UBERON:0000947!3.32e-28!21;UBERON:0010191!3.32e-28!21;UBERON:0004535!2.78e-26!110;UBERON:0001009!3.18e-25!113;UBERON:0004290!6.52e-25!70;UBERON:0001134!1.14e-22!61;UBERON:0002036!1.14e-22!61;UBERON:0003082!1.14e-22!61;UBERON:0000486!1.22e-22!82;UBERON:0000914!4.61e-22!83;UBERON:0002329!4.61e-22!83;UBERON:0003077!4.61e-22!83;UBERON:0003059!4.61e-22!83;UBERON:0007282!4.61e-22!83;UBERON:0009618!4.61e-22!83;UBERON:0007285!4.61e-22!83;UBERON:0002385!1.17e-21!63;UBERON:0001015!1.17e-21!63;UBERON:0000383!1.17e-21!63;UBERON:0003914!6.08e-21!118;UBERON:0004237!1.59e-19!10;UBERON:0004695!1.59e-19!10;UBERON:0002111!1.59e-19!10;UBERON:0004178!1.59e-19!10;UBERON:0001135!1.35e-14!15;UBERON:0000490!9.28e-13!138;UBERON:0005256!7.81e-11!143;UBERON:0004111!1.39e-09!241;UBERON:0000415!4.81e-09!4;UBERON:0007240!4.81e-09!4;UBERON:0005742!4.81e-09!4;UBERON:0005734!4.81e-09!4;UBERON:0004664!4.81e-09!4;UBERON:0004663!4.81e-09!4;UBERON:0001310!9.58e-09!4;UBERON:0003081!2.78e-08!216;UBERON:0000477!4.37e-08!286;UBERON:0000025!4.42e-08!194;UBERON:0003834!6.56e-08!5;UBERON:0001533!6.56e-08!5;UBERON:0001621!7.34e-08!3;UBERON:0003498!9.99e-08!5;UBERON:0005985!9.99e-08!5;UBERON:0000483!5.77e-07!309;UBERON:0003513!6.17e-07!8;UBERON:0000119!8.97e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.10e-43;33!UBERON:0004571;5.10e-43;33!UBERON:0001637;8.47e-38;42!UBERON:0003509;8.47e-38;42!UBERON:0004572;8.47e-38;42!UBERON:0003834;1.34e-22;5!UBERON:0001533;1.34e-22;5!UBERON:0003498;1.81e-21;3!UBERON:0005985;1.81e-21;3!UBERON:0001621;1.81e-21;3!UBERON:0007500;2.90e-19;56!UBERON:0001981;2.90e-19;56!UBERON:0004537;2.90e-19;56!UBERON:0003513;3.35e-16;7!UBERON:0000055;3.73e-15;65!UBERON:0002456;8.77e-15;2!UBERON:0000947;8.92e-15;21!UBERON:0010191;8.92e-15;21!UBERON:0000948;2.65e-14;22!UBERON:0003914;4.76e-13;74!UBERON:0007100;1.74e-12;25!UBERON:0002049;4.21e-12;75!UBERON:0007798;4.21e-12;75!UBERON:0004237;5.68e-11;10!UBERON:0004695;5.68e-11;10!UBERON:0002111;5.68e-11;10!UBERON:0004178;5.68e-11;10!UBERON:0004535;1.01e-07;109!UBERON:0004797;1.28e-07;4!UBERON:0000415;1.28e-07;4!UBERON:0007240;1.28e-07;4!UBERON:0005742;1.28e-07;4!UBERON:0005734;1.28e-07;4!UBERON:0004664;1.28e-07;4!UBERON:0004663;1.28e-07;4!UBERON:0001135;2.37e-07;15!UBERON:0000025;6.53e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,9.47e-50,33;UBERON:0004571,9.47e-50,33;UBERON:0001637,1.26e-48,42;UBERON:0003509,1.26e-48,42;UBERON:0004572,1.26e-48,42;UBERON:0004872,3.87e-35,83;UBERON:0007500,1.35e-33,59;UBERON:0001981,1.35e-33,59;UBERON:0004537,1.35e-33,59;UBERON:0006965,1.35e-33,59;UBERON:0000055,4.17e-32,68;UBERON:0004535,2.31e-28,109;UBERON:0002049,1.65e-27,78;UBERON:0007798,1.65e-27,78;UBERON:0001009,1.74e-27,112;UBERON:0003914,1.07e-23,117;UBERON:0003834,1.42e-22,5;UBERON:0001533,1.42e-22,5;UBERON:0003498,5.51e-22,5;UBERON:0005985,5.51e-22,5;UBERON:0001134,1.13e-21,62;UBERON:0002036,1.13e-21,62;UBERON:0003082,1.13e-21,62;UBERON:0001621,1.59e-21,3;UBERON:0002385,6.67e-21,64;UBERON:0001015,6.67e-21,64;UBERON:0000383,6.67e-21,64;UBERON:0002329,1.51e-18,71;UBERON:0003059,1.51e-18,71;UBERON:0007282,1.51e-18,71;UBERON:0004290,1.51e-18,71;UBERON:0009618,1.51e-18,71;UBERON:0003077,3.00e-18,72;UBERON:0007285,3.00e-18,72;UBERON:0007524,5.86e-18,73;UBERON:0000948,8.25e-17,24;UBERON:0005498,8.25e-17,24;UBERON:0004140,8.25e-17,24;UBERON:0009881,8.25e-17,24;UBERON:0004141,8.25e-17,24;UBERON:0003084,8.25e-17,24;UBERON:0007005,8.25e-17,24;UBERON:0004139,8.25e-17,24;UBERON:0004291,8.25e-17,24;UBERON:0007503,1.29e-16,78;UBERON:0003513,3.49e-16,7;UBERON:0000486,1.95e-15,83;UBERON:0000947,6.40e-15,21;UBERON:0010191,6.40e-15,21;UBERON:0007100,8.10e-15,27;UBERON:0002456,9.10e-15,2;UBERON:0003081,4.44e-13,203;UBERON:0000025,1.13e-12,192;UBERON:0004237,4.61e-11,10;UBERON:0004695,4.61e-11,10;UBERON:0002111,4.61e-11,10;UBERON:0004178,4.61e-11,10;UBERON:0004111,2.13e-10,240;UBERON:0000490,7.66e-10,148;UBERON:0005256,1.48e-09,122;UBERON:0000926,1.16e-08,315;UBERON:0004120,1.16e-08,315;UBERON:0006603,1.16e-08,315;UBERON:0000415,1.22e-07,4;UBERON:0007240,1.22e-07,4;UBERON:0005742,1.22e-07,4;UBERON:0005734,1.22e-07,4;UBERON:0004664,1.22e-07,4;UBERON:0004663,1.22e-07,4;UBERON:0001135,2.07e-07,15;UBERON:0000483,3.28e-07,306;UBERON:0002204,3.87e-07,167;UBERON:0000119,4.25e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,0.602694528023977,2.19093027116212,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,1.62028389576352,0,0,0,0,0,0.183201743930407,0,0,0,0,2.15271869829786,0.662045904066094,1.43418310374407,0.709336764396714,0,0,1.72667283892012,0,0.134710672069688,0,0,0,0,0.936480230490962,0,0,0.469737994575059,0.485618833104395,0.280901613404497,0.204154171254893,0.61417158655884,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0.309157587715317,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.773043412653187,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0.577465791044295,1.38895653772983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.887808626565635,0.492762936082855,0.519254429183621,1.16210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0.464845549297286,0.31481234683064,0.6970372701606,0.616067160352178,1.59691809095107,0.869932992075073,4.26245703939016,0,0,0,0,0,0,0.318203247925937,1.56989728039846,0,0.274537029736055,0,2.62837226045311,3.17020642346017,5.89761838734574,0,3.41198885483798,2.11300293513511,0,0.707027159768564,1.13008116620243,0,5.30751180192976,7.89211593456773,0,0,1.21746226177622,0.6196469961995,0.845086807596724,0,0,0.7133421029625,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19228767021794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909894705249887,0,1.41159491818903,0,0,0,0,0,0.189403005275089,0,0,1.14420034198462,0,1.24349760466224,8.2798883994195,0.159296767163702,0,0.465788870628778,0,1.32920857278997,0,0,0,0.406870733204662,3.09142720644351,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24082554265728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr11:102661460..102661475,- | |||
}} |
Latest revision as of 17:29, 23 July 2015
Short description: | p@chr11:102661460..102661475, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102661460..102661475, - |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.26e-45 | 32 |
smooth muscle cell | 1.47e-32 | 43 |
smooth muscle myoblast | 1.47e-32 | 43 |
muscle cell | 8.27e-25 | 55 |
muscle precursor cell | 2.26e-23 | 58 |
myoblast | 2.26e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.26e-23 | 58 |
smooth muscle cell of the subclavian artery | 1.42e-22 | 5 |
electrically responsive cell | 4.47e-22 | 61 |
electrically active cell | 4.47e-22 | 61 |
smooth muscle cell of the coronary artery | 1.59e-21 | 3 |
cardiocyte | 5.52e-20 | 16 |
cardiac mesenchymal cell | 1.45e-15 | 4 |
migratory trunk neural crest cell | 1.45e-15 | 4 |
smooth muscle cell of the internal thoracic artery | 9.10e-15 | 2 |
mesodermal cell | 9.13e-13 | 121 |
aortic smooth muscle cell | 4.61e-11 | 10 |
embryonic cell | 1.21e-08 | 250 |
meningothelial cell | 6.63e-08 | 1 |
smooth muscle cell of the pulmonary artery | 1.21e-07 | 1 |
fibroblast of tunica adventitia of artery | 1.22e-07 | 4 |
fibroblast of the aortic adventitia | 1.22e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 4.40e-08 | 1 |
central nervous system cancer | 6.63e-08 | 1 |
meningioma | 6.63e-08 | 1 |
organ system benign neoplasm | 9.94e-08 | 1 |
skin benign neoplasm | 9.94e-08 | 1 |