FFCP PHASE1:Hg19::chr11:43855489..43855503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000524643_5end | |association_with_transcript=0bp_to_ENST00000524643_5end | ||
|cluster_id=chr11:43855489..43855503,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_ENST00000524643_5end | |description=CAGE_peak_1_at_ENST00000524643_5end | ||
|id=chr11:43855489..43855503,- | |id=chr11:43855489..43855503,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-99;3!UBERON:0007297;1.07e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!2.02e-39!12;UBERON:0002028!2.02e-39!12;UBERON:0007277!2.02e-39!12;UBERON:0004732!2.59e-36!13;UBERON:0003076!2.45e-31!15;UBERON:0003057!2.45e-31!15;UBERON:0007023!3.33e-30!115;UBERON:0001896!2.46e-23!3;UBERON:0005290!2.46e-23!3;UBERON:0010096!2.46e-23!3;UBERON:0002298!2.86e-23!8;UBERON:0002680!4.17e-21!9;UBERON:0001895!4.17e-21!9;UBERON:0010092!4.17e-21!9;UBERON:0000955!8.75e-21!69;UBERON:0006238!8.75e-21!69;UBERON:0001049!1.76e-19!57;UBERON:0005068!1.76e-19!57;UBERON:0006241!1.76e-19!57;UBERON:0007135!1.76e-19!57;UBERON:0002616!9.43e-19!59;UBERON:0005743!1.15e-18!86;UBERON:0001017!3.92e-17!82;UBERON:0000073!1.18e-16!94;UBERON:0001016!1.18e-16!94;UBERON:0000007!2.53e-16!2;UBERON:0003075!2.69e-14!86;UBERON:0007284!2.69e-14!86;UBERON:0002346!1.49e-13!90;UBERON:0000153!3.21e-13!129;UBERON:0007811!3.21e-13!129;UBERON:0002037!2.39e-12!6;UBERON:0006215!2.39e-12!6;UBERON:0000033!3.03e-12!123;UBERON:0000988!8.47e-11!3;UBERON:0001301!4.52e-09!1;UBERON:0003296!1.32e-08!4;UBERON:0010133!1.32e-08!4;UBERON:0006834!1.53e-08!1;UBERON:0007190!2.06e-08!1;UBERON:0002336!2.22e-08!1;UBERON:0001018!2.22e-08!1;UBERON:0002473!2.22e-08!1;UBERON:0005340!2.22e-08!1;UBERON:0002316!2.22e-08!1;UBERON:0003544!2.22e-08!1;UBERON:0001020!2.22e-08!1;UBERON:0005970!2.22e-08!1;UBERON:0002437!2.22e-08!1;UBERON:0004121!4.47e-08!169;UBERON:0000924!7.97e-08!173;UBERON:0006601!7.97e-08!173;UBERON:0000025!8.05e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;1.45e-68;12!UBERON:0002028;1.45e-68;12!UBERON:0004732;2.34e-63;13!UBERON:0002037;3.84e-50;6!UBERON:0001896;2.38e-44;3!UBERON:0005290;2.38e-44;3!UBERON:0001301;7.05e-34;1!UBERON:0002680;8.87e-34;9!UBERON:0001895;8.87e-34;9!UBERON:0002298;8.47e-23;6!UBERON:0006947;2.89e-12;3!UBERON:0004054;2.89e-12;3!UBERON:0000073;1.53e-11;53!UBERON:0002616;1.53e-11;53!UBERON:0005904;1.57e-09;4!UBERON:0000955;2.96e-08;68!UBERON:0001017;6.01e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.26e-68,12;UBERON:0002028,1.26e-68,12;UBERON:0007277,1.26e-68,12;UBERON:0004732,2.06e-63,13;UBERON:0003076,4.54e-55,15;UBERON:0003057,4.54e-55,15;UBERON:0002037,3.84e-50,6;UBERON:0006215,3.84e-50,6;UBERON:0001896,1.91e-44,3;UBERON:0005290,1.91e-44,3;UBERON:0010096,1.91e-44,3;UBERON:0002680,8.87e-34,9;UBERON:0001895,8.87e-34,9;UBERON:0010092,8.87e-34,9;UBERON:0001301,9.85e-34,1;UBERON:0002298,7.58e-23,6;UBERON:0000073,9.10e-16,53;UBERON:0002616,9.10e-16,53;UBERON:0001049,5.77e-15,56;UBERON:0005068,5.77e-15,56;UBERON:0006241,5.77e-15,56;UBERON:0007135,5.77e-15,56;UBERON:0000955,2.81e-12,68;UBERON:0006238,2.81e-12,68;UBERON:0006947,3.24e-12,3;UBERON:0004054,3.24e-12,3;UBERON:0007023,7.60e-11,114;UBERON:0001017,2.00e-10,81;UBERON:0003075,2.00e-10,82;UBERON:0007284,2.00e-10,82;UBERON:0002346,5.77e-10,86;UBERON:0005904,1.70e-09,4;UBERON:0001016,1.91e-09,89;UBERON:0010371,2.53e-08,104 | |||
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|short_description=p1@ENST00000524643 | |short_description=p1@ENST00000524643 | ||
}} | }} |
Latest revision as of 22:13, 23 July 2015
Short description: | p1@ENST00000524643 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000524643_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000524643_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 1.26e-68 | 12 |
hindbrain | 1.26e-68 | 12 |
presumptive hindbrain | 1.26e-68 | 12 |
segmental subdivision of nervous system | 2.06e-63 | 13 |
posterior neural tube | 4.54e-55 | 15 |
chordal neural plate | 4.54e-55 | 15 |
cerebellum | 3.84e-50 | 6 |
rhombic lip | 3.84e-50 | 6 |
medulla oblongata | 1.91e-44 | 3 |
myelencephalon | 1.91e-44 | 3 |
future myelencephalon | 1.91e-44 | 3 |
regional part of metencephalon | 8.87e-34 | 9 |
metencephalon | 8.87e-34 | 9 |
future metencephalon | 8.87e-34 | 9 |
epididymis | 9.85e-34 | 1 |
brainstem | 7.58e-23 | 6 |
regional part of nervous system | 9.10e-16 | 53 |
regional part of brain | 9.10e-16 | 53 |
neural tube | 5.77e-15 | 56 |
neural rod | 5.77e-15 | 56 |
future spinal cord | 5.77e-15 | 56 |
neural keel | 5.77e-15 | 56 |
brain | 2.81e-12 | 68 |
future brain | 2.81e-12 | 68 |
male genital duct | 3.24e-12 | 3 |
internal male genitalia | 3.24e-12 | 3 |
adult organism | 7.60e-11 | 114 |
central nervous system | 2.00e-10 | 81 |
neural plate | 2.00e-10 | 82 |
presumptive neural plate | 2.00e-10 | 82 |
neurectoderm | 5.77e-10 | 86 |
duct of male reproductive system | 1.70e-09 | 4 |
nervous system | 1.91e-09 | 89 |
ecto-epithelium | 2.53e-08 | 104 |