FFCP PHASE1:Hg19::chr12:124942085..124942126,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:124942085..124942126,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:124942085..124942126,- | |description=CAGE_peak_at_chr12:124942085..124942126,- | ||
|id=chr12:124942085..124942126,- | |id=chr12:124942085..124942126,- | ||
|ontology_enrichment_celltype=CL:0000738!1.82e-36!140;CL:0002057!5.85e-35!42;CL:0002087!3.67e-33!119;CL:0000988!3.92e-33!182;CL:0002031!2.31e-32!124;CL:0000037!1.80e-31!172;CL:0000566!1.80e-31!172;CL:0000860!2.42e-31!45;CL:0002032!3.85e-31!165;CL:0000837!3.85e-31!165;CL:0000766!3.00e-27!76;CL:0000557!5.25e-25!71;CL:0000839!1.88e-24!70;CL:0002194!3.85e-23!63;CL:0000576!3.85e-23!63;CL:0000040!3.85e-23!63;CL:0000559!3.85e-23!63;CL:0002009!4.96e-23!65;CL:0000763!1.73e-21!112;CL:0000049!1.73e-21!112;CL:0000542!5.60e-09!53;CL:0000051!5.60e-09!53;CL:0000838!9.51e-09!52;CL:0002393!9.98e-08!9;CL:0002397!9.98e-08!9;CL:0000791!5.33e-07!18;CL:0000789!5.33e-07!18;CL:0002420!5.33e-07!18;CL:0002419!5.33e-07!18;CL:0000790!5.33e-07!18 | |ontology_enrichment_celltype=CL:0000738!1.82e-36!140;CL:0002057!5.85e-35!42;CL:0002087!3.67e-33!119;CL:0000988!3.92e-33!182;CL:0002031!2.31e-32!124;CL:0000037!1.80e-31!172;CL:0000566!1.80e-31!172;CL:0000860!2.42e-31!45;CL:0002032!3.85e-31!165;CL:0000837!3.85e-31!165;CL:0000766!3.00e-27!76;CL:0000557!5.25e-25!71;CL:0000839!1.88e-24!70;CL:0002194!3.85e-23!63;CL:0000576!3.85e-23!63;CL:0000040!3.85e-23!63;CL:0000559!3.85e-23!63;CL:0002009!4.96e-23!65;CL:0000763!1.73e-21!112;CL:0000049!1.73e-21!112;CL:0000542!5.60e-09!53;CL:0000051!5.60e-09!53;CL:0000838!9.51e-09!52;CL:0002393!9.98e-08!9;CL:0002397!9.98e-08!9;CL:0000791!5.33e-07!18;CL:0000789!5.33e-07!18;CL:0002420!5.33e-07!18;CL:0002419!5.33e-07!18;CL:0000790!5.33e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-45;33!CL:0002057;1.77e-45;33!CL:0000473;1.36e-32;39!CL:0000234;1.36e-32;39!CL:0000576;1.59e-29;48!CL:0000766;3.73e-24;69!CL:0002087;2.57e-12;104!CL:0000763;3.46e-11;100!CL:0000738;3.37e-08;136!CL:0000097;5.61e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.14e-57,42;CL:0002057,1.14e-57,42;CL:0000473,2.15e-51,48;CL:0000234,2.15e-51,48;CL:0000766,5.67e-48,72;CL:0000839,3.20e-42,66;CL:0000557,2.16e-41,67;CL:0002194,1.61e-38,59;CL:0000576,1.61e-38,59;CL:0000040,1.61e-38,59;CL:0000559,1.61e-38,59;CL:0000738,2.15e-37,136;CL:0002009,7.26e-37,61;CL:0002087,3.43e-32,115;CL:0002031,3.84e-32,120;CL:0000988,3.32e-30,177;CL:0000763,7.15e-30,108;CL:0000049,7.15e-30,108;CL:0000037,4.39e-29,168;CL:0002032,2.08e-27,161;CL:0000837,2.08e-27,161;CL:0002393,1.85e-09,9;CL:0002397,1.85e-09,9;CL:0000097,5.63e-07,5;CL:0002028,5.63e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.27e-42;42!CL:0000049;1.78e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.44e-28!102;UBERON:0003061!3.44e-28!102;UBERON:0002193!1.69e-25!112;UBERON:0002371!7.02e-21!80;UBERON:0001474!5.29e-18!86;UBERON:0007023!4.27e-16!115;UBERON:0002405!4.13e-14!115;UBERON:0004765!6.92e-14!101;UBERON:0001434!6.92e-14!101;UBERON:0002619!1.01e-11!22;UBERON:0001950!2.10e-10!20;UBERON:0001869!1.33e-09!32;UBERON:0000956!1.52e-09!25;UBERON:0000203!1.52e-09!25;UBERON:0001893!2.42e-09!34;UBERON:0002020!6.13e-09!34;UBERON:0003528!6.13e-09!34;UBERON:0002780!9.12e-09!41;UBERON:0001890!9.12e-09!41;UBERON:0006240!9.12e-09!41;UBERON:0002791!1.07e-08!33;UBERON:0003080!2.33e-08!42;UBERON:0003081!3.20e-08!216;UBERON:0001049!4.26e-08!57;UBERON:0005068!4.26e-08!57;UBERON:0006241!4.26e-08!57;UBERON:0007135!4.26e-08!57;UBERON:0000955!9.59e-07!69;UBERON:0006238!9.59e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.61e-21;22!UBERON:0001950;1.97e-18;20!UBERON:0000956;5.94e-18;25!UBERON:0000203;5.94e-18;25!UBERON:0001869;7.13e-15;32!UBERON:0001893;1.18e-13;34!UBERON:0002791;5.05e-13;32!UBERON:0003528;4.87e-12;34!UBERON:0002020;4.87e-12;34!UBERON:0002780;8.75e-11;41!UBERON:0001890;8.75e-11;41!UBERON:0000200;1.38e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.68e-36,98;UBERON:0003061,2.68e-36,98;UBERON:0002371,6.43e-35,76;UBERON:0002193,1.64e-31,108;UBERON:0001474,2.14e-31,82;UBERON:0002405,1.60e-27,93;UBERON:0004765,1.94e-27,90;UBERON:0001434,1.22e-24,100;UBERON:0002619,4.28e-21,22;UBERON:0001950,1.46e-18,20;UBERON:0000956,4.69e-18,25;UBERON:0000203,4.69e-18,25;UBERON:0001869,1.04e-16,32;UBERON:0001893,2.00e-15,34;UBERON:0002791,8.26e-15,32;UBERON:0002780,1.45e-14,41;UBERON:0001890,1.45e-14,41;UBERON:0003080,1.45e-14,41;UBERON:0006240,1.45e-14,41;UBERON:0003528,1.17e-13,34;UBERON:0002020,1.17e-13,34;UBERON:0003081,6.62e-12,203;UBERON:0002204,3.83e-11,167;UBERON:0000200,8.75e-11,6;UBERON:0000073,5.20e-10,53;UBERON:0002616,5.20e-10,53;UBERON:0001049,3.47e-09,56;UBERON:0005068,3.47e-09,56;UBERON:0006241,3.47e-09,56;UBERON:0007135,3.47e-09,56;UBERON:0000955,4.58e-09,68;UBERON:0006238,4.58e-09,68;UBERON:0003056,5.28e-08,61;UBERON:0001017,2.03e-07,81;UBERON:0007023,6.65e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.492603536699674,0.550975469195755,2.75354993794233,2.30297638858328,4.18003532953405,0,0,0,0,0.284338464974843,0,39.8876694142952,32.8892893851032,37.1088588924107,0,0,0,3.63495596948912,7.55751887377619,10.1885305698883,11.6214518452842,21.3807301771349,20.7503268499719,11.2200033005639,15.1134816852169,12.2970759542064,22.0637235671436,28.4013260776883,41.9822108442459,4.32957380947991,11.1891521523717,4.49446968890169,16.2224462956578,20.53945773287,20.4587880255693,2.63881040149373,11.1699648268114,8.52449501065388,39.1782472148588,48.795129323438,61.0365804015663,9.2962006144995,17.2089363078666,13.6828972164223,22.3997815974346,36.0912083267813,24.0511414455072,0.211255286311942,2.33864729961548,0.419317291016752,0.336985893439485,0,0.16072558669708,1.42506371870624,1.9891667719909,1.64397738388171,0,0,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,0,1.76171156811282,0.382273228125229,2.64342657158052,8.40762844472304,0,0.590129310341499,2.35806457649499,0.616804496998528,0.167186495390678,0,0,1.94826728407911,0.557052284425868,0,0.221533894583621,0,1.0247305578054,0.390178042679635,1.47994114143309,1.65810010671509,1.15921234294021,0.14828656316206,0,1.04535523804977,0.339928028092699,1.53288197440768,0.34362744548263,1.26509846009751,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.255973222308837,1.24930726552346,0.473554504088034,0,2.21767417547206,1.87208137048455,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.916853528483988,0,0,0.324547393654683,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,6.4275356829655,21.1474677851587,11.8178361801908,20.4512742150735,0.126995788584338,0.381988425558278,0,0,0.102827492703324,1.20137223137567,0.285826432630578,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.699810938274399,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0,0.672510863961164,2.95546140302891,4.31255149719035,4.10697716095195,0,0,0,0.167516265334349,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,1.6541442089831,4.09856981555372,3.52200940751366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.812839312631559,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0.569647187174163,0.952927101831156,0.822724546172388,0.648473311192717,0.540031437238115,1.58625035258854,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0.423347165447766,0.324621940274555,0,0,0,2.50634477090067,0.169291777801603,0.481764225311099,0,0,0.343505344755765,0,0,0.166849141711909,0.390776190804081,0,0,1.35227839237992,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,2.95405774462077,0,0,0,0.398495976502139,0.552567831062295,0,0,3.07712013652674,0.311039587661807,0,0,0,1.7755813014648,0,0,3.87733098438087,3.15411533750294,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,1.97446857438575,0,0,0.846452843541768,0,0.46112780877612,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0.995261931078505,0.707660516026713,2.4441205797345,3.55825354416746,2.47127877893006,2.29728288912002,0.202203398942031,0,0,0,0,0,1.18375320854817,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,3.29216138970569,0,0,0.640358984218058,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,0,0,1.05154941711726,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,2.17925449778521,0,0,0,0.899895566206002,0,4.85996453264197,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0,1.65695622138878,0,1.38328142328561,0,0,0,0,0,0,0,1.77213635993397,3.41673541725497,3.505346059782,0,0,0.248385611765534,0,0,0,1.14186133417987,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.450772826991655,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0.168942440653073,0.76872455576384,0,0,3.594719339945,0.194860308839388,0,0.817826971279221,0,0,0,0.79994958341972,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0.1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|short_description=p@chr12:124942085..124942126,- | |short_description=p@chr12:124942085..124942126,- | ||
}} | }} |
Latest revision as of 06:24, 24 July 2015
Short description: | p@chr12:124942085..124942126, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:124942085..124942126, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.14e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-57 | 42 |
defensive cell | 2.15e-51 | 48 |
phagocyte | 2.15e-51 | 48 |
myeloid leukocyte | 5.67e-48 | 72 |
myeloid lineage restricted progenitor cell | 3.20e-42 | 66 |
granulocyte monocyte progenitor cell | 2.16e-41 | 67 |
monopoietic cell | 1.61e-38 | 59 |
monocyte | 1.61e-38 | 59 |
monoblast | 1.61e-38 | 59 |
promonocyte | 1.61e-38 | 59 |
leukocyte | 2.15e-37 | 136 |
macrophage dendritic cell progenitor | 7.26e-37 | 61 |
nongranular leukocyte | 3.43e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 3.84e-32 | 120 |
hematopoietic cell | 3.32e-30 | 177 |
myeloid cell | 7.15e-30 | 108 |
common myeloid progenitor | 7.15e-30 | 108 |
hematopoietic stem cell | 4.39e-29 | 168 |
hematopoietic oligopotent progenitor cell | 2.08e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-27 | 161 |
intermediate monocyte | 1.85e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.85e-09 | 9 |
mast cell | 5.63e-07 | 5 |
basophil mast progenitor cell | 5.63e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.68e-36 | 98 |
blood island | 2.68e-36 | 98 |
bone marrow | 6.43e-35 | 76 |
hemolymphoid system | 1.64e-31 | 108 |
bone element | 2.14e-31 | 82 |
immune system | 1.60e-27 | 93 |
skeletal element | 1.94e-27 | 90 |
skeletal system | 1.22e-24 | 100 |
regional part of cerebral cortex | 4.28e-21 | 22 |
neocortex | 1.46e-18 | 20 |
cerebral cortex | 4.69e-18 | 25 |
pallium | 4.69e-18 | 25 |
cerebral hemisphere | 1.04e-16 | 32 |
telencephalon | 2.00e-15 | 34 |
regional part of telencephalon | 8.26e-15 | 32 |
regional part of forebrain | 1.45e-14 | 41 |
forebrain | 1.45e-14 | 41 |
anterior neural tube | 1.45e-14 | 41 |
future forebrain | 1.45e-14 | 41 |
brain grey matter | 1.17e-13 | 34 |
gray matter | 1.17e-13 | 34 |
lateral plate mesoderm | 6.62e-12 | 203 |
musculoskeletal system | 3.83e-11 | 167 |
gyrus | 8.75e-11 | 6 |
regional part of nervous system | 5.20e-10 | 53 |
regional part of brain | 5.20e-10 | 53 |
neural tube | 3.47e-09 | 56 |
neural rod | 3.47e-09 | 56 |
future spinal cord | 3.47e-09 | 56 |
neural keel | 3.47e-09 | 56 |
brain | 4.58e-09 | 68 |
future brain | 4.58e-09 | 68 |
pre-chordal neural plate | 5.28e-08 | 61 |
central nervous system | 2.03e-07 | 81 |
adult organism | 6.65e-07 | 114 |