FFCP PHASE1:Hg19::chr12:12775594..12775630,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:12775594..12775630,- | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_at_chr12:12775594..12775630,- | |description=CAGE_peak_at_chr12:12775594..12775630,- | ||
|id=chr12:12775594..12775630,- | |id=chr12:12775594..12775630,- | ||
|ontology_enrichment_celltype=CL:0000791!6.94e-33!18;CL:0000789!6.94e-33!18;CL:0002420!6.94e-33!18;CL:0002419!6.94e-33!18;CL:0000790!6.94e-33!18;CL:0000084!8.42e-23!25;CL:0000827!8.42e-23!25;CL:0000624!2.02e-22!6;CL:0000625!3.82e-16!11;CL:0000838!1.46e-14!52;CL:0000738!1.97e-14!140;CL:0000542!3.24e-14!53;CL:0000051!3.24e-14!53;CL:0000898!3.72e-12!3;CL:0000453!7.81e-12!5;CL:0000037!1.86e-11!172;CL:0000566!1.86e-11!172;CL:0000988!1.90e-10!182;CL:0002087!2.30e-10!119;CL:0002032!3.12e-10!165;CL:0000837!3.12e-10!165;CL:0000990!9.85e-10!8;CL:0002031!1.07e-09!124;CL:0000815!1.34e-08!2;CL:0000792!1.34e-08!2;CL:0002677!1.34e-08!2;CL:0000451!6.58e-08!10 | |ontology_enrichment_celltype=CL:0000791!6.94e-33!18;CL:0000789!6.94e-33!18;CL:0002420!6.94e-33!18;CL:0002419!6.94e-33!18;CL:0000790!6.94e-33!18;CL:0000084!8.42e-23!25;CL:0000827!8.42e-23!25;CL:0000624!2.02e-22!6;CL:0000625!3.82e-16!11;CL:0000838!1.46e-14!52;CL:0000738!1.97e-14!140;CL:0000542!3.24e-14!53;CL:0000051!3.24e-14!53;CL:0000898!3.72e-12!3;CL:0000453!7.81e-12!5;CL:0000037!1.86e-11!172;CL:0000566!1.86e-11!172;CL:0000988!1.90e-10!182;CL:0002087!2.30e-10!119;CL:0002032!3.12e-10!165;CL:0000837!3.12e-10!165;CL:0000990!9.85e-10!8;CL:0002031!1.07e-09!124;CL:0000815!1.34e-08!2;CL:0000792!1.34e-08!2;CL:0002677!1.34e-08!2;CL:0000451!6.58e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.01e-28;18!CL:0000789;7.01e-28;18!CL:0002419;7.01e-28;18!CL:0000624;8.59e-22;6!CL:0000084;4.88e-20;25!CL:0000898;6.82e-20;3!CL:0000895;2.38e-15;1!CL:0000625;3.72e-12;11!CL:0000815;1.55e-08;2!CL:0000792;1.55e-08;2!CL:0002677;1.55e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.36e-28,18;CL:0000789,7.36e-28,18;CL:0002420,7.36e-28,18;CL:0002419,7.36e-28,18;CL:0000790,7.36e-28,18;CL:0000624,1.27e-21,6;CL:0000084,5.05e-20,25;CL:0000827,5.05e-20,25;CL:0000898,9.53e-20,3;CL:0000810,3.66e-15,1;CL:0000895,3.66e-15,1;CL:0002436,3.66e-15,1;CL:0002427,3.66e-15,1;CL:0002428,3.66e-15,1;CL:0002429,3.66e-15,1;CL:0002433,3.66e-15,1;CL:0002431,3.66e-15,1;CL:0002432,3.66e-15,1;CL:0000625,3.13e-12,11;CL:0000838,1.67e-09,52;CL:0000542,2.55e-09,53;CL:0000051,2.55e-09,53;CL:0000815,1.61e-08,2;CL:0000792,1.61e-08,2;CL:0002677,1.61e-08,2;CL:0000893,3.08e-08,2;CL:0002489,3.08e-08,2;CL:0000809,3.08e-08,2;CL:0000808,3.08e-08,2;CL:0000894,3.08e-08,2;CL:0000806,3.08e-08,2;CL:0000807,3.08e-08,2;CL:0000805,3.08e-08,2;CL:0002425,3.08e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;7.01e-28;18!CL:0002427;2.38e-15;1!UBERON:0005425;2.38e-15;1!CL:0002425;2.48e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.38e-15;1!UBERON:0001785;2.38e-15;1!UBERON:0002464;2.38e-15;1!UBERON:0004904;2.38e-15;1!UBERON:0001021;2.38e-15;1!UBERON:0003714;2.48e-08;2!UBERON:0005162;2.48e-08;2!UBERON:0000122;2.48e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.38e-15,1;UBERON:0001785,2.38e-15,1;UBERON:0002464,2.38e-15,1;UBERON:0004904,2.38e-15,1;UBERON:0001021,2.38e-15,1;UBERON:0003902,2.38e-15,1;UBERON:0005425,2.38e-15,1;UBERON:0003714,2.48e-08,2;UBERON:0005162,2.48e-08,2;UBERON:0000122,2.48e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,0.393010762749165,0.411202997999018,0.334372990781356,0.32592226663359,0.946895611469467,3.89653456815823,0.557052284425868,3.53527088969805,2.65840673500345,17.602251144726,0.128091319725675,0.780356085359269,0,0.829050053357545,1.73881851441031,1.18629250529648,0.267540828089713,4.18142095219907,0.339928028092699,1.14966148080576,0.34362744548263,7.84361045260459,1.91139248594458,0,1.90090408889675,0,0.383959833463255,2.49861453104692,0.710331756132051,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0.327130788511688,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,0.393010762749165,0.411202997999018,0.334372990781356,0.32592226663359,0.946895611469467,3.89653456815823,0.557052284425868,3.53527088969805,2.65840673500345,17.602251144726,0.128091319725675,0.780356085359269,0,0.829050053357545,1.73881851441031,1.18629250529648,0.267540828089713,4.18142095219907,0.339928028092699,1.14966148080576,0.34362744548263,7.84361045260459,1.91139248594458,0,1.90090408889675,0,0.383959833463255,2.49861453104692,0.710331756132051,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,0.327130788511688,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:12775594..12775630,- | |short_description=p@chr12:12775594..12775630,- | ||
}} | }} |
Latest revision as of 06:37, 24 July 2015
Short description: | p@chr12:12775594..12775630, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12775594..12775630, - |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.38e-15 | 1 |
cranial nerve | 2.38e-15 | 1 |
nerve trunk | 2.38e-15 | 1 |
nerve connecting eye with brain | 2.38e-15 | 1 |
nerve | 2.38e-15 | 1 |
retinal neural layer | 2.38e-15 | 1 |
presumptive neural retina | 2.38e-15 | 1 |
neural tissue | 2.48e-08 | 2 |
multi cell component structure | 2.48e-08 | 2 |
neuron projection bundle | 2.48e-08 | 2 |