FFCP PHASE1:Hg19::chr12:131118436..131118449,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000541840_5end | |association_with_transcript=-30bp_to_ENST00000541840_5end | ||
|cluster_id=chr12:131118436..131118449,- | |||
|coexpression_cluster_id=C3255 | |coexpression_cluster_id=C3255 | ||
|description=CAGE_peak_2_at_ENST00000541840_5end | |description=CAGE_peak_2_at_ENST00000541840_5end | ||
|id=chr12:131118436..131118449,- | |id=chr12:131118436..131118449,- | ||
|ontology_enrichment_celltype=CL:0000123;4.19e-12;2!CL:0000242;4.19e-12;2!CL:0000540;2.20e-08;6!CL:0000404;2.20e-08;6!CL:0002553;9.47e-07;1 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000123;4.19e-12;2!CL:0000242;4.19e-12;2!CL:0000540;2.20e-08;6!CL:0000404;2.20e-08;6!CL:0002553;9.47e-07;1 | ||
|ontology_enrichment_disease=DOID:169;1.30e-08;6!DOID:0050619;4.85e-07;1!DOID:1357;4.85e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000242,4.68e-12,2;CL:0000047,1.04e-10,8;CL:0000540,2.21e-08,6;CL:0000031,2.21e-08,6;CL:0000404,2.21e-08,6 | ||
|ontology_enrichment_uberon=UBERON:0003296;2.60e-13;4!UBERON:0010133;2.60e-13;4!UBERON:0000007;1.54e-12;2!UBERON:0000073;5.17e-08;53!UBERON:0002616;5.17e-08;53!UBERON:0002780;7.02e-08;41!UBERON:0001890;7.02e-08;41!UBERON:0001894;8.63e-08;7!UBERON:0002619;1.76e-07;22!UBERON:0001764;4.85e-07;1!UBERON:0001825;4.85e-07;1 | |ontology_enrichment_development_v019=CL:0000031;2.20e-08;6 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.30e-08;6!DOID:0050619;4.85e-07;1!DOID:1357;4.85e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.18e-08,6;DOID:0050619,4.85e-07,1;DOID:1357,4.85e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003296;2.60e-13;4!UBERON:0010133;2.60e-13;4!UBERON:0000007;1.54e-12;2!UBERON:0000073;5.17e-08;53!UBERON:0002616;5.17e-08;53!UBERON:0002780;7.02e-08;41!UBERON:0001890;7.02e-08;41!UBERON:0001894;8.63e-08;7!UBERON:0002619;1.76e-07;22!UBERON:0001764;4.85e-07;1!UBERON:0001825;4.85e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.00e-20,89;UBERON:0001017,2.06e-16,81;UBERON:0003296,2.61e-13,4;UBERON:0010133,2.61e-13,4;UBERON:0001049,8.51e-13,56;UBERON:0005068,8.51e-13,56;UBERON:0006241,8.51e-13,56;UBERON:0007135,8.51e-13,56;UBERON:0000007,1.55e-12,2;UBERON:0000073,1.57e-11,53;UBERON:0002616,1.57e-11,53;UBERON:0011216,4.10e-11,223;UBERON:0004121,5.96e-11,171;UBERON:0000924,5.96e-11,171;UBERON:0006601,5.96e-11,171;UBERON:0002780,1.33e-10,41;UBERON:0001890,1.33e-10,41;UBERON:0003080,1.33e-10,41;UBERON:0006240,1.33e-10,41;UBERON:0000955,5.98e-10,68;UBERON:0006238,5.98e-10,68;UBERON:0003075,2.26e-09,82;UBERON:0007284,2.26e-09,82;UBERON:0010371,2.48e-09,104;UBERON:0002346,8.20e-09,86;UBERON:0003056,4.65e-08,61;UBERON:0001894,8.64e-08,7;UBERON:0006222,8.64e-08,7;UBERON:0002619,2.04e-07,22;UBERON:0001764,4.85e-07,1;UBERON:0001825,4.85e-07,1 | |||
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| ||
|short_description=p2@ENST00000541840 | |short_description=p2@ENST00000541840 | ||
}} | }} |
Latest revision as of 06:45, 24 July 2015
Short description: | p2@ENST00000541840 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000541840_5end |
Coexpression cluster: | C3255_pituitary_smallcell_maxillary_neuroblastoma_argyrophil_gastrointestinal_small |
Association with transcript: | -30bp_to_ENST00000541840_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.68e-12 | 2 |
neuronal stem cell | 1.04e-10 | 8 |
neuron | 2.21e-08 | 6 |
neuroblast | 2.21e-08 | 6 |
electrically signaling cell | 2.21e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.00e-20 | 89 |
central nervous system | 2.06e-16 | 81 |
gland of diencephalon | 2.61e-13 | 4 |
neuroendocrine gland | 2.61e-13 | 4 |
neural tube | 8.51e-13 | 56 |
neural rod | 8.51e-13 | 56 |
future spinal cord | 8.51e-13 | 56 |
neural keel | 8.51e-13 | 56 |
pituitary gland | 1.55e-12 | 2 |
regional part of nervous system | 1.57e-11 | 53 |
regional part of brain | 1.57e-11 | 53 |
organ system subdivision | 4.10e-11 | 223 |
ectoderm-derived structure | 5.96e-11 | 171 |
ectoderm | 5.96e-11 | 171 |
presumptive ectoderm | 5.96e-11 | 171 |
regional part of forebrain | 1.33e-10 | 41 |
forebrain | 1.33e-10 | 41 |
anterior neural tube | 1.33e-10 | 41 |
future forebrain | 1.33e-10 | 41 |
brain | 5.98e-10 | 68 |
future brain | 5.98e-10 | 68 |
neural plate | 2.26e-09 | 82 |
presumptive neural plate | 2.26e-09 | 82 |
ecto-epithelium | 2.48e-09 | 104 |
neurectoderm | 8.20e-09 | 86 |
pre-chordal neural plate | 4.65e-08 | 61 |
diencephalon | 8.64e-08 | 7 |
future diencephalon | 8.64e-08 | 7 |
regional part of cerebral cortex | 2.04e-07 | 22 |
maxillary sinus | 4.85e-07 | 1 |
paranasal sinus | 4.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.18e-08 | 6 |
paranasal sinus cancer | 4.85e-07 | 1 |
maxillary sinus cancer | 4.85e-07 | 1 |