FFCP PHASE1:Hg19::chr12:50065547..50065560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:50065547..50065560,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:50065547..50065560,+ | |||
|id=chr12:50065547..50065560,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.36e-52!140;CL:0002057!2.67e-51!42;CL:0000860!3.05e-47!45;CL:0000766!1.30e-42!76;CL:0000557!3.47e-41!71;CL:0002031!3.93e-41!124;CL:0000037!3.39e-39!172;CL:0000566!3.39e-39!172;CL:0002087!1.07e-37!119;CL:0000988!1.12e-37!182;CL:0000839!4.07e-37!70;CL:0002009!8.65e-36!65;CL:0002032!2.26e-33!165;CL:0000837!2.26e-33!165;CL:0002194!1.67e-32!63;CL:0000576!1.67e-32!63;CL:0000040!1.67e-32!63;CL:0000559!1.67e-32!63;CL:0000763!1.55e-28!112;CL:0000049!1.55e-28!112;CL:0002320!8.63e-14!365;CL:0000134!1.22e-13!358;CL:0000219!4.32e-11!390;CL:0000048!2.65e-09!430;CL:0000034!4.13e-09!444;CL:0000723!5.82e-09!436;CL:0000623!2.58e-08!3;CL:0000825!2.58e-08!3;CL:0000842!2.78e-08!3;CL:0002274!3.23e-08!5;CL:0000457!3.23e-08!5;CL:0002191!3.23e-08!5;CL:0000097!3.23e-08!5;CL:0000831!3.23e-08!5;CL:0002028!3.23e-08!5;CL:0000767!5.39e-08!3;CL:0000624!8.13e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.46e-49;33!CL:0002057;3.46e-49;33!CL:0000473;4.86e-34;39!CL:0000234;4.86e-34;39!CL:0000576;1.80e-26;48!CL:0000766;6.19e-22;69!CL:0002087;1.05e-14;104!CL:0000763;3.17e-12;100!CL:0000738;1.51e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.83e-51,42;CL:0002057,1.83e-51,42;CL:0000473,1.70e-44,48;CL:0000234,1.70e-44,48;CL:0000766,1.64e-37,72;CL:0002009,3.91e-37,61;CL:0000557,5.63e-37,67;CL:0002194,9.77e-35,59;CL:0000576,9.77e-35,59;CL:0000040,9.77e-35,59;CL:0000559,9.77e-35,59;CL:0000839,4.83e-34,66;CL:0000738,2.42e-32,136;CL:0002031,1.78e-29,120;CL:0002087,1.84e-28,115;CL:0000763,7.27e-26,108;CL:0000049,7.27e-26,108;CL:0000037,4.00e-25,168;CL:0002032,2.04e-24,161;CL:0000837,2.04e-24,161;CL:0000988,1.47e-23,177;CL:0000134,9.02e-10,354;CL:0002320,1.83e-09,361;CL:0000219,2.21e-08,386;CL:0000034,2.27e-07,441;CL:0000048,4.69e-07,427;CL:0000723,7.15e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.67e-36;42!UBERON:0005425;6.12e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.33e-35!80;UBERON:0002390!2.12e-32!102;UBERON:0003061!2.12e-32!102;UBERON:0001474!3.75e-32!86;UBERON:0002193!5.59e-30!112;UBERON:0004765!8.33e-26!101;UBERON:0001434!8.33e-26!101;UBERON:0002405!1.27e-25!115;UBERON:0002384!5.39e-13!375;UBERON:0003081!2.08e-12!216;UBERON:0002204!1.34e-11!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.12e-07;1!UBERON:0001785;6.12e-07;1!UBERON:0002464;6.12e-07;1!UBERON:0004904;6.12e-07;1!UBERON:0001021;6.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.17e-32,76;UBERON:0001474,1.91e-29,82;UBERON:0004765,1.92e-26,90;UBERON:0002390,2.02e-26,98;UBERON:0003061,2.02e-26,98;UBERON:0002405,1.89e-25,93;UBERON:0002193,1.50e-23,108;UBERON:0001434,2.32e-23,100;UBERON:0002204,3.57e-12,167;UBERON:0003081,1.74e-11,203;UBERON:0002384,4.80e-09,371;UBERON:0000941,4.57e-07,1;UBERON:0001785,4.57e-07,1;UBERON:0002464,4.57e-07,1;UBERON:0004904,4.57e-07,1;UBERON:0001021,4.57e-07,1;UBERON:0003902,4.57e-07,1;UBERON:0005425,4.57e-07,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,1.18009283054671,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0.553995408531877,3.20871115952227,1.73608696572681,0,0,0,0.145398238779565,0,1.21292030593908,0.464858073811369,0.411167888021826,0.929119112685311,1.1507695692886,0.512321413058201,1.41889337933151,2.75796544589295,3.22742341791913,1.35426486594342,1.31769637679823,0.272906150057846,1.12361742222542,5.50951006267625,5.77672248736969,5.75403413219137,0,0.398927315243264,1.27867425159808,5.5139755339431,6.80862269629368,6.22822248995575,0,0,0.868755378820466,2.42159801053347,4.41933163185078,5.06339819905415,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,1.180258620683,0,1.43921049299656,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0,0,0,0.383220493601921,1.03088233644789,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,1.8735593944205,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.862510299438069,1.28343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.413536052245775,0.862856803274467,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:50065547..50065560,+ | |||
}} | }} |
Latest revision as of 09:05, 24 July 2015
Short description: | p@chr12:50065547..50065560, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:50065547..50065560, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.83e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-51 | 42 |
defensive cell | 1.70e-44 | 48 |
phagocyte | 1.70e-44 | 48 |
myeloid leukocyte | 1.64e-37 | 72 |
macrophage dendritic cell progenitor | 3.91e-37 | 61 |
granulocyte monocyte progenitor cell | 5.63e-37 | 67 |
monopoietic cell | 9.77e-35 | 59 |
monocyte | 9.77e-35 | 59 |
monoblast | 9.77e-35 | 59 |
promonocyte | 9.77e-35 | 59 |
myeloid lineage restricted progenitor cell | 4.83e-34 | 66 |
leukocyte | 2.42e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 1.78e-29 | 120 |
nongranular leukocyte | 1.84e-28 | 115 |
myeloid cell | 7.27e-26 | 108 |
common myeloid progenitor | 7.27e-26 | 108 |
hematopoietic stem cell | 4.00e-25 | 168 |
hematopoietic oligopotent progenitor cell | 2.04e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-24 | 161 |
hematopoietic cell | 1.47e-23 | 177 |
mesenchymal cell | 9.02e-10 | 354 |
connective tissue cell | 1.83e-09 | 361 |
motile cell | 2.21e-08 | 386 |
stem cell | 2.27e-07 | 441 |
multi fate stem cell | 4.69e-07 | 427 |
somatic stem cell | 7.15e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.17e-32 | 76 |
bone element | 1.91e-29 | 82 |
skeletal element | 1.92e-26 | 90 |
hematopoietic system | 2.02e-26 | 98 |
blood island | 2.02e-26 | 98 |
immune system | 1.89e-25 | 93 |
hemolymphoid system | 1.50e-23 | 108 |
skeletal system | 2.32e-23 | 100 |
musculoskeletal system | 3.57e-12 | 167 |
lateral plate mesoderm | 1.74e-11 | 203 |
connective tissue | 4.80e-09 | 371 |
cranial nerve II | 4.57e-07 | 1 |
cranial nerve | 4.57e-07 | 1 |
nerve trunk | 4.57e-07 | 1 |
nerve connecting eye with brain | 4.57e-07 | 1 |
nerve | 4.57e-07 | 1 |
retinal neural layer | 4.57e-07 | 1 |
presumptive neural retina | 4.57e-07 | 1 |