FFCP PHASE1:Hg19::chr12:62654594..62654600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:62654594..62654600,- | |||
|coexpression_cluster_id=C370 | |coexpression_cluster_id=C370 | ||
|description=CAGE_peak_at_chr12:62654594..62654600,- | |description=CAGE_peak_at_chr12:62654594..62654600,- | ||
|id=chr12:62654594..62654600,- | |id=chr12:62654594..62654600,- | ||
|ontology_enrichment_celltype=CL:0000037!1.88e-61!172;CL:0000566!1.88e-61!172;CL:0000988!6.58e-57!182;CL:0002032!3.82e-55!165;CL:0000837!3.82e-55!165;CL:0000738!6.23e-46!140;CL:0000763!1.16e-38!112;CL:0000049!1.16e-38!112;CL:0002031!2.66e-37!124;CL:0002087!2.86e-35!119;CL:0002057!5.22e-30!42;CL:0000860!2.37e-28!45;CL:0000766!1.94e-25!76;CL:0000839!7.24e-22!70;CL:0000557!3.37e-21!71;CL:0002009!4.25e-20!65;CL:0002194!7.00e-19!63;CL:0000576!7.00e-19!63;CL:0000040!7.00e-19!63;CL:0000559!7.00e-19!63;CL:0000542!4.67e-14!53;CL:0000051!4.67e-14!53;CL:0000838!1.22e-13!52;CL:0000134!8.28e-13!358;CL:0002320!6.08e-12!365;CL:0000219!2.19e-09!390;CL:0000084!3.56e-07!25;CL:0000827!3.56e-07!25;CL:0000791!9.28e-07!18;CL:0000789!9.28e-07!18;CL:0002420!9.28e-07!18;CL:0002419!9.28e-07!18;CL:0000790!9.28e-07!18;CL:0000094!9.50e-07!8 | |ontology_enrichment_celltype=CL:0000037!1.88e-61!172;CL:0000566!1.88e-61!172;CL:0000988!6.58e-57!182;CL:0002032!3.82e-55!165;CL:0000837!3.82e-55!165;CL:0000738!6.23e-46!140;CL:0000763!1.16e-38!112;CL:0000049!1.16e-38!112;CL:0002031!2.66e-37!124;CL:0002087!2.86e-35!119;CL:0002057!5.22e-30!42;CL:0000860!2.37e-28!45;CL:0000766!1.94e-25!76;CL:0000839!7.24e-22!70;CL:0000557!3.37e-21!71;CL:0002009!4.25e-20!65;CL:0002194!7.00e-19!63;CL:0000576!7.00e-19!63;CL:0000040!7.00e-19!63;CL:0000559!7.00e-19!63;CL:0000542!4.67e-14!53;CL:0000051!4.67e-14!53;CL:0000838!1.22e-13!52;CL:0000134!8.28e-13!358;CL:0002320!6.08e-12!365;CL:0000219!2.19e-09!390;CL:0000084!3.56e-07!25;CL:0000827!3.56e-07!25;CL:0000791!9.28e-07!18;CL:0000789!9.28e-07!18;CL:0002420!9.28e-07!18;CL:0002419!9.28e-07!18;CL:0000790!9.28e-07!18;CL:0000094!9.50e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.58e-31;33!CL:0002057;8.58e-31;33!CL:0000473;4.08e-21;39!CL:0000234;4.08e-21;39!CL:0000576;7.25e-17;48!CL:0000763;3.35e-15;100!CL:0000766;1.51e-11;69!CL:0002087;5.02e-10;104!CL:0000094;3.74e-09;8!CL:0000988;7.80e-08;177!CL:0000738;2.70e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.06e-48,168;CL:0000988,9.89e-45,177;CL:0000763,4.18e-42,108;CL:0000049,4.18e-42,108;CL:0002032,6.43e-41,161;CL:0000837,6.43e-41,161;CL:0000860,2.87e-32,42;CL:0002057,2.87e-32,42;CL:0000738,8.66e-30,136;CL:0000473,3.38e-27,48;CL:0000234,3.38e-27,48;CL:0000766,6.66e-26,72;CL:0002087,1.70e-22,115;CL:0002009,1.92e-22,61;CL:0002194,9.18e-22,59;CL:0000576,9.18e-22,59;CL:0000040,9.18e-22,59;CL:0000559,9.18e-22,59;CL:0002031,5.06e-21,120;CL:0000839,4.32e-20,66;CL:0000557,1.04e-19,67;CL:0000134,2.61e-13,354;CL:0002320,1.03e-12,361;CL:0000219,1.23e-10,386;CL:0000094,4.54e-09,8;CL:0000034,6.40e-09,441;CL:0000048,3.81e-08,427;CL:0000723,8.28e-08,433;CL:0000784,8.74e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.38e-23;42!CL:0000049;1.28e-11;108 | |||
|ontology_enrichment_disease=DOID:2531!2.72e-14!51;DOID:0060083!2.72e-14!51;DOID:1240!6.58e-12!39;DOID:8692!5.11e-10!31 | |ontology_enrichment_disease=DOID:2531!2.72e-14!51;DOID:0060083!2.72e-14!51;DOID:1240!6.58e-12!39;DOID:8692!5.11e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;7.59e-15;31!DOID:1036;2.57e-10;8!DOID:1240;9.70e-10;39!DOID:2531;1.25e-07;51!DOID:0060083;1.25e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.14e-15,31;DOID:1240,1.27e-12,39;DOID:1036,3.40e-10,8;DOID:2531,9.40e-10,51;DOID:0060083,9.40e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.85e-28!102;UBERON:0003061!5.85e-28!102;UBERON:0002193!1.50e-24!112;UBERON:0002371!2.99e-18!80;UBERON:0001474!6.74e-16!86;UBERON:0002405!2.44e-12!115;UBERON:0004765!2.28e-11!101;UBERON:0001434!2.28e-11!101;UBERON:0002384!8.81e-11!375;UBERON:0000178!8.55e-09!15;UBERON:0000179!8.55e-09!15;UBERON:0000463!8.55e-09!15;UBERON:0003081!5.95e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!5.85e-28!102;UBERON:0003061!5.85e-28!102;UBERON:0002193!1.50e-24!112;UBERON:0002371!2.99e-18!80;UBERON:0001474!6.74e-16!86;UBERON:0002405!2.44e-12!115;UBERON:0004765!2.28e-11!101;UBERON:0001434!2.28e-11!101;UBERON:0002384!8.81e-11!375;UBERON:0000178!8.55e-09!15;UBERON:0000179!8.55e-09!15;UBERON:0000463!8.55e-09!15;UBERON:0003081!5.95e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.68e-12;15!UBERON:0000179;1.68e-12;15!UBERON:0000463;1.68e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.14e-25,98;UBERON:0003061,8.14e-25,98;UBERON:0002193,1.75e-21,108;UBERON:0002371,6.76e-18,76;UBERON:0001474,5.49e-16,82;UBERON:0004765,7.56e-14,90;UBERON:0002405,3.82e-13,93;UBERON:0000178,1.91e-12,15;UBERON:0000179,1.91e-12,15;UBERON:0000463,1.91e-12,15;UBERON:0002384,6.60e-12,371;UBERON:0001434,1.13e-11,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3743854128627,1.53531759238885,0.619264493264304,0,0.30120591877825,0,0.619737604642413,0.142169232487422,4.9912074686924,1.10799081706375,1.80490002723128,1.73608696572681,0,0,0,1.45398238779565,0.755751887377619,0.485168122375632,2.78914844286822,0.822335776043652,1.54853185447552,20.4261598548727,12.0395532068677,8.51336027598907,8.96338769915208,5.80936215225443,2.70852973188684,0.564727018627814,0,0.224723484445085,18.977201326996,2.56743221660875,7.67204550958849,15.8328624089624,5.98390972864896,8.95071976118658,3.77272010217159,3.40431134814684,2.4912889959823,24.1198718646474,7.30076085788282,10.2078757011405,4.84319602106695,3.68277635987565,2.53169909952708,0,0.637812899895131,0.419317291016752,0.561643155732475,0.300353785683013,0.32145117339416,0,0,0,0,0,0,1.28019066769952,0.400395987036012,0,0.661044872784862,0.954053754535364,2.27685187643779,1.76171156811282,3.05818582500183,2.64342657158052,2.80254281490768,2.89722493252585,1.37696839079683,0.786021525498329,2.67281948699362,8.69369776031526,1.62961133316795,3.31413464014313,3.89653456815823,2.33961959458865,3.53527088969805,3.76607620792156,4.87446954777028,5.63601806792971,7.41338281091306,2.46656856905514,1.65810010671509,0.869409257205157,1.33457906845854,1.87278579662799,0,1.0197840842781,0.383220493601921,1.03088233644789,0.506039384039006,0.318565414324097,0,0,0,0.383959833463255,0,0.236777252044017,0,0.403213486449465,1.33720097891754,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.43094374583205,3.43196946468077,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,1.50939302401662,1.66845947163673,0,0,0,0,0,2.24702107184155,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.94142780736755,1.38745825144478,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,1.31555925987561,0.784306353074702,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,5.58192370155386,5.35246044999663,7.40541343326411,2.85878130549347,2.05681136543097,1.29694662238543,3.24018862342869,3.17250070517708,0,0,0.245040215981032,0.185803175125719,0.577076851905779,0.284567373393656,0,0,5.36215036370627,4.65681881992542,0,5.05434920604226,0,0,7.51903431270201,1.69291777801603,1.4452926759333,0.605399121573143,0.851692475380653,0.687010689511529,0,0,0,0,0,9.84699191581699,31.64331438169,2.99764771198038,115.609344172037,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0.246169610922139,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0,0,11.9565700127106,11.3716269904289,15.4395860017775,4.17458211993207,0,0,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0.364909578431332,0,0,0,0,0.61214552326098,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0,0.640358984218058,0,0,0.229073192331831,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,11.0824903011608,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0.992332043623902,0.197611631897944,0.974340787047167,0,0,0,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0.22589216407792,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.375935671919414,0.386747327841463,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0.213233981900981,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0,0,0.332660356546013,0,0.213454691755431,0,0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|short_description=p@chr12:62654594..62654600,- | |short_description=p@chr12:62654594..62654600,- | ||
}} | }} |
Latest revision as of 11:07, 24 July 2015
Short description: | p@chr12:62654594..62654600, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:62654594..62654600, - |
Coexpression cluster: | C370_acute_chronic_leukemia_CD34_testicular_Mast_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.06e-48 | 168 |
hematopoietic cell | 9.89e-45 | 177 |
myeloid cell | 4.18e-42 | 108 |
common myeloid progenitor | 4.18e-42 | 108 |
hematopoietic oligopotent progenitor cell | 6.43e-41 | 161 |
hematopoietic multipotent progenitor cell | 6.43e-41 | 161 |
classical monocyte | 2.87e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-32 | 42 |
leukocyte | 8.66e-30 | 136 |
defensive cell | 3.38e-27 | 48 |
phagocyte | 3.38e-27 | 48 |
myeloid leukocyte | 6.66e-26 | 72 |
nongranular leukocyte | 1.70e-22 | 115 |
macrophage dendritic cell progenitor | 1.92e-22 | 61 |
monopoietic cell | 9.18e-22 | 59 |
monocyte | 9.18e-22 | 59 |
monoblast | 9.18e-22 | 59 |
promonocyte | 9.18e-22 | 59 |
hematopoietic lineage restricted progenitor cell | 5.06e-21 | 120 |
myeloid lineage restricted progenitor cell | 4.32e-20 | 66 |
granulocyte monocyte progenitor cell | 1.04e-19 | 67 |
mesenchymal cell | 2.61e-13 | 354 |
connective tissue cell | 1.03e-12 | 361 |
motile cell | 1.23e-10 | 386 |
granulocyte | 4.54e-09 | 8 |
stem cell | 6.40e-09 | 441 |
multi fate stem cell | 3.81e-08 | 427 |
somatic stem cell | 8.28e-08 | 433 |
plasmacytoid dendritic cell | 8.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.14e-25 | 98 |
blood island | 8.14e-25 | 98 |
hemolymphoid system | 1.75e-21 | 108 |
bone marrow | 6.76e-18 | 76 |
bone element | 5.49e-16 | 82 |
skeletal element | 7.56e-14 | 90 |
immune system | 3.82e-13 | 93 |
blood | 1.91e-12 | 15 |
haemolymphatic fluid | 1.91e-12 | 15 |
organism substance | 1.91e-12 | 15 |
connective tissue | 6.60e-12 | 371 |
skeletal system | 1.13e-11 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.14e-15 | 31 |
leukemia | 1.27e-12 | 39 |
chronic leukemia | 3.40e-10 | 8 |
hematologic cancer | 9.40e-10 | 51 |
immune system cancer | 9.40e-10 | 51 |