FFCP PHASE1:Hg19::chr12:6341836..6341857,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6341836..6341857,+ | |||
|description=CAGE_peak_at_chr12:6341836..6341857,+ | |description=CAGE_peak_at_chr12:6341836..6341857,+ | ||
|id=chr12:6341836..6341857,+ | |id=chr12:6341836..6341857,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.40e-14!254;CL:0002321!9.95e-09!248;CL:0000220!2.27e-08!246;CL:0002078!7.14e-08!44;CL:0000115!7.72e-07!35 | |ontology_enrichment_celltype=CL:0000066!1.40e-14!254;CL:0002321!9.95e-09!248;CL:0000220!2.27e-08!246;CL:0002078!7.14e-08!44;CL:0000115!7.72e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002188;3.24e-15;5!CL:0000115;2.42e-12;36!CL:0002681;2.27e-11;12!CL:0002584;2.27e-11;12!CL:1000746;9.16e-11;7!CL:1000612;9.16e-11;7!CL:1000449;6.99e-09;15!CL:1000497;1.03e-07;17!CL:0002518;1.03e-07;17!CL:0002078;1.16e-07;45!CL:0000575;4.28e-07;2!CL:0002139;9.40e-07;24 | |ontology_enrichment_celltype_v019=CL:0002188;3.24e-15;5!CL:0000115;2.42e-12;36!CL:0002681;2.27e-11;12!CL:0002584;2.27e-11;12!CL:1000746;9.16e-11;7!CL:1000612;9.16e-11;7!CL:1000449;6.99e-09;15!CL:1000497;1.03e-07;17!CL:0002518;1.03e-07;17!CL:0002078;1.16e-07;45!CL:0000575;4.28e-07;2!CL:0002139;9.40e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.64e-15,5;CL:0002078,4.65e-13,45;CL:0000115,4.95e-13,36;CL:0002681,2.17e-11,12;CL:0002584,2.17e-11,12;CL:1000746,9.92e-11,7;CL:1000612,9.92e-11,7;CL:1000449,6.73e-09,15;CL:0000213,4.62e-08,58;CL:0000215,4.62e-08,58;CL:1000497,9.98e-08,17;CL:0002518,9.98e-08,17;CL:0000575,2.23e-07,2;CL:0000222,3.30e-07,121 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.70e-08;10 | |ontology_enrichment_development_v019=UBERON:0005795;3.70e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;7.47e-11;3!DOID:127;7.47e-11;3!DOID:0060072;3.23e-08;4 | |ontology_enrichment_disease_v019=DOID:0060084;7.47e-11;3!DOID:127;7.47e-11;3!DOID:0060072;3.23e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.25e-11,3;DOID:127,7.25e-11,3;DOID:0060072,3.16e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000467!2.24e-11!625;UBERON:0000480!3.29e-11!626;UBERON:0000468!1.03e-10!659;UBERON:0000922!1.46e-10!612;UBERON:0000477!1.52e-09!286;UBERON:0002050!4.05e-09!605;UBERON:0005423!4.05e-09!605;UBERON:0000923!6.41e-09!604;UBERON:0005291!6.41e-09!604;UBERON:0006598!6.41e-09!604;UBERON:0002532!6.41e-09!604;UBERON:0004111!4.62e-08!241;UBERON:0005156!5.01e-08!59;UBERON:0000990!5.01e-08!59;UBERON:0004876!5.34e-08!20;UBERON:0003064!1.33e-07!37;UBERON:0000464!3.28e-07!104;UBERON:0000080!7.82e-07!18;UBERON:0002120!7.82e-07!18;UBERON:0004875!7.82e-07!18;UBERON:0005721!7.82e-07!18;UBERON:0005754!7.82e-07!18;UBERON:0007297!7.82e-07!18;UBERON:0000058!8.12e-07!26 | |ontology_enrichment_uberon=UBERON:0000467!2.24e-11!625;UBERON:0000480!3.29e-11!626;UBERON:0000468!1.03e-10!659;UBERON:0000922!1.46e-10!612;UBERON:0000477!1.52e-09!286;UBERON:0002050!4.05e-09!605;UBERON:0005423!4.05e-09!605;UBERON:0000923!6.41e-09!604;UBERON:0005291!6.41e-09!604;UBERON:0006598!6.41e-09!604;UBERON:0002532!6.41e-09!604;UBERON:0004111!4.62e-08!241;UBERON:0005156!5.01e-08!59;UBERON:0000990!5.01e-08!59;UBERON:0004876!5.34e-08!20;UBERON:0003064!1.33e-07!37;UBERON:0000464!3.28e-07!104;UBERON:0000080!7.82e-07!18;UBERON:0002120!7.82e-07!18;UBERON:0004875!7.82e-07!18;UBERON:0005721!7.82e-07!18;UBERON:0005754!7.82e-07!18;UBERON:0007297!7.82e-07!18;UBERON:0000058!8.12e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.74e-11;15!UBERON:0001225;2.27e-11;12!UBERON:0008987;2.27e-11;12!UBERON:0000074;9.16e-11;7!UBERON:0001229;9.16e-11;7!UBERON:0000473;1.91e-09;8!UBERON:0001851;6.99e-09;15!UBERON:0006555;6.99e-09;15!UBERON:0004819;6.99e-09;15!UBERON:0001285;6.99e-09;15!UBERON:0007684;6.99e-09;15!UBERON:0001044;6.76e-08;6!UBERON:0003293;6.76e-08;6!UBERON:0003294;6.76e-08;6!UBERON:0010047;6.76e-08;6!UBERON:0003408;6.76e-08;6!UBERON:0000167;6.76e-08;6!UBERON:0000487;2.24e-07;22!UBERON:0003135;9.23e-07;11!UBERON:0001829;9.74e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000353;1.74e-11;15!UBERON:0001225;2.27e-11;12!UBERON:0008987;2.27e-11;12!UBERON:0000074;9.16e-11;7!UBERON:0001229;9.16e-11;7!UBERON:0000473;1.91e-09;8!UBERON:0001851;6.99e-09;15!UBERON:0006555;6.99e-09;15!UBERON:0004819;6.99e-09;15!UBERON:0001285;6.99e-09;15!UBERON:0007684;6.99e-09;15!UBERON:0001044;6.76e-08;6!UBERON:0003293;6.76e-08;6!UBERON:0003294;6.76e-08;6!UBERON:0010047;6.76e-08;6!UBERON:0003408;6.76e-08;6!UBERON:0000167;6.76e-08;6!UBERON:0000487;2.24e-07;22!UBERON:0003135;9.23e-07;11!UBERON:0001829;9.74e-07;2 | ||
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| ||
|short_description=p@chr12:6341836..6341857,+ | |short_description=p@chr12:6341836..6341857,+ | ||
}} | }} |
Latest revision as of 11:11, 24 July 2015
Short description: | p@chr12:6341836..6341857, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6341836..6341857, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.64e-15 | 5 |
meso-epithelial cell | 4.65e-13 | 45 |
endothelial cell | 4.95e-13 | 36 |
kidney cortical cell | 2.17e-11 | 12 |
renal cortical epithelial cell | 2.17e-11 | 12 |
glomerular cell | 9.92e-11 | 7 |
kidney corpuscule cell | 9.92e-11 | 7 |
epithelial cell of nephron | 6.73e-09 | 15 |
lining cell | 4.62e-08 | 58 |
barrier cell | 4.62e-08 | 58 |
kidney cell | 9.98e-08 | 17 |
kidney epithelial cell | 9.98e-08 | 17 |
corneal epithelial cell | 2.23e-07 | 2 |
mesodermal cell | 3.30e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.25e-11 | 3 |
leiomyoma | 7.25e-11 | 3 |
benign neoplasm | 3.16e-08 | 4 |