FFCP PHASE1:Hg19::chr13:111180990..111181011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:111180990..111181011,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr13:111180990..111181011,+ | |description=CAGE_peak_at_chr13:111180990..111181011,+ | ||
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|ontology_enrichment_celltype=CL:0002057!4.00e-127!42;CL:0000860!4.33e-118!45;CL:0000766!5.30e-86!76;CL:0002194!4.47e-85!63;CL:0000576!4.47e-85!63;CL:0000040!4.47e-85!63;CL:0000559!4.47e-85!63;CL:0002009!3.08e-82!65;CL:0000839!7.66e-76!70;CL:0000557!1.14e-74!71;CL:0000763!9.92e-56!112;CL:0000049!9.92e-56!112;CL:0000738!4.27e-50!140;CL:0002087!5.69e-49!119;CL:0002031!2.38e-39!124;CL:0000037!4.18e-39!172;CL:0000566!4.18e-39!172;CL:0000988!1.86e-36!182;CL:0002032!4.95e-35!165;CL:0000837!4.95e-35!165;CL:0002393!8.03e-21!9;CL:0002397!8.03e-21!9;CL:0000134!7.23e-15!358;CL:0002320!2.13e-14!365;CL:0000219!9.62e-13!390;CL:0000842!2.57e-12!3;CL:0000048!9.21e-11!430;CL:0000723!1.76e-10!436;CL:0000034!4.08e-10!444;CL:0000224!2.34e-09!4;CL:0000094!2.32e-08!8 | |ontology_enrichment_celltype=CL:0002057!4.00e-127!42;CL:0000860!4.33e-118!45;CL:0000766!5.30e-86!76;CL:0002194!4.47e-85!63;CL:0000576!4.47e-85!63;CL:0000040!4.47e-85!63;CL:0000559!4.47e-85!63;CL:0002009!3.08e-82!65;CL:0000839!7.66e-76!70;CL:0000557!1.14e-74!71;CL:0000763!9.92e-56!112;CL:0000049!9.92e-56!112;CL:0000738!4.27e-50!140;CL:0002087!5.69e-49!119;CL:0002031!2.38e-39!124;CL:0000037!4.18e-39!172;CL:0000566!4.18e-39!172;CL:0000988!1.86e-36!182;CL:0002032!4.95e-35!165;CL:0000837!4.95e-35!165;CL:0002393!8.03e-21!9;CL:0002397!8.03e-21!9;CL:0000134!7.23e-15!358;CL:0002320!2.13e-14!365;CL:0000219!9.62e-13!390;CL:0000842!2.57e-12!3;CL:0000048!9.21e-11!430;CL:0000723!1.76e-10!436;CL:0000034!4.08e-10!444;CL:0000224!2.34e-09!4;CL:0000094!2.32e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-99;33!CL:0002057;3.31e-99;33!CL:0000473;9.05e-68;39!CL:0000234;9.05e-68;39!CL:0000576;2.97e-56;48!CL:0000766;2.41e-38;69!CL:0000763;1.23e-15;100!CL:0002087;1.68e-15;104!CL:0002393;9.08e-11;6!CL:0002397;9.08e-11;6!CL:0000738;5.67e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;3.31e-99;33!CL:0002057;3.31e-99;33!CL:0000473;9.05e-68;39!CL:0000234;9.05e-68;39!CL:0000576;2.97e-56;48!CL:0000766;2.41e-38;69!CL:0000763;1.23e-15;100!CL:0002087;1.68e-15;104!CL:0002393;9.08e-11;6!CL:0002397;9.08e-11;6!CL:0000738;5.67e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.92e-107,42;CL:0002057,6.92e-107,42;CL:0000473,5.32e-93,48;CL:0000234,5.32e-93,48;CL:0002194,1.50e-73,59;CL:0000576,1.50e-73,59;CL:0000040,1.50e-73,59;CL:0000559,1.50e-73,59;CL:0002009,4.85e-71,61;CL:0000766,8.50e-70,72;CL:0000839,2.03e-65,66;CL:0000557,2.15e-64,67;CL:0000763,2.74e-45,108;CL:0000049,2.74e-45,108;CL:0002087,6.16e-36,115;CL:0000738,4.10e-35,136;CL:0002031,2.87e-34,120;CL:0002032,5.43e-29,161;CL:0000837,5.43e-29,161;CL:0000037,1.33e-27,168;CL:0000988,5.67e-26,177;CL:0000134,1.19e-10,354;CL:0002320,2.39e-10,361;CL:0000219,2.75e-09,386;CL:0000048,5.50e-08,427;CL:0000723,8.32e-08,433;CL:0000034,1.42e-07,441;CL:0002393,2.50e-07,9;CL:0002397,2.50e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-73;42!CL:0000049;1.39e-11;108!UBERON:0005425;6.03e-08;1 | |ontology_enrichment_development_v019=CL:0002057;1.04e-73;42!CL:0000049;1.39e-11;108!UBERON:0005425;6.03e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000941;6.03e-08;1!UBERON:0001785;6.03e-08;1!UBERON:0002464;6.03e-08;1!UBERON:0004904;6.03e-08;1!UBERON:0001021;6.03e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0000941;6.03e-08;1!UBERON:0001785;6.03e-08;1!UBERON:0002464;6.03e-08;1!UBERON:0004904;6.03e-08;1!UBERON:0001021;6.03e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-56,76;UBERON:0001474,5.66e-52,82;UBERON:0004765,5.08e-47,90;UBERON:0002405,2.22e-45,93;UBERON:0002390,7.24e-43,98;UBERON:0003061,7.24e-43,98;UBERON:0001434,6.25e-42,100;UBERON:0002193,1.57e-38,108;UBERON:0002204,2.02e-23,167;UBERON:0003081,1.76e-18,203;UBERON:0000926,2.88e-10,315;UBERON:0004120,2.88e-10,315;UBERON:0006603,2.88e-10,315;UBERON:0002384,6.14e-10,371;UBERON:0000941,5.82e-08,1;UBERON:0001785,5.82e-08,1;UBERON:0002464,5.82e-08,1;UBERON:0004904,5.82e-08,1;UBERON:0001021,5.82e-08,1;UBERON:0003902,5.82e-08,1;UBERON:0005425,5.82e-08,1 | |||
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|short_description=p@chr13:111180990..111181011,+ | |short_description=p@chr13:111180990..111181011,+ | ||
}} | }} |
Latest revision as of 14:33, 24 July 2015
Short description: | p@chr13:111180990..111181011, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111180990..111181011, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.92e-107 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.92e-107 | 42 |
defensive cell | 5.32e-93 | 48 |
phagocyte | 5.32e-93 | 48 |
monopoietic cell | 1.50e-73 | 59 |
monocyte | 1.50e-73 | 59 |
monoblast | 1.50e-73 | 59 |
promonocyte | 1.50e-73 | 59 |
macrophage dendritic cell progenitor | 4.85e-71 | 61 |
myeloid leukocyte | 8.50e-70 | 72 |
myeloid lineage restricted progenitor cell | 2.03e-65 | 66 |
granulocyte monocyte progenitor cell | 2.15e-64 | 67 |
myeloid cell | 2.74e-45 | 108 |
common myeloid progenitor | 2.74e-45 | 108 |
nongranular leukocyte | 6.16e-36 | 115 |
leukocyte | 4.10e-35 | 136 |
hematopoietic lineage restricted progenitor cell | 2.87e-34 | 120 |
hematopoietic oligopotent progenitor cell | 5.43e-29 | 161 |
hematopoietic multipotent progenitor cell | 5.43e-29 | 161 |
hematopoietic stem cell | 1.33e-27 | 168 |
hematopoietic cell | 5.67e-26 | 177 |
mesenchymal cell | 1.19e-10 | 354 |
connective tissue cell | 2.39e-10 | 361 |
motile cell | 2.75e-09 | 386 |
multi fate stem cell | 5.50e-08 | 427 |
somatic stem cell | 8.32e-08 | 433 |
stem cell | 1.42e-07 | 441 |
intermediate monocyte | 2.50e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-56 | 76 |
bone element | 5.66e-52 | 82 |
skeletal element | 5.08e-47 | 90 |
immune system | 2.22e-45 | 93 |
hematopoietic system | 7.24e-43 | 98 |
blood island | 7.24e-43 | 98 |
skeletal system | 6.25e-42 | 100 |
hemolymphoid system | 1.57e-38 | 108 |
musculoskeletal system | 2.02e-23 | 167 |
lateral plate mesoderm | 1.76e-18 | 203 |
mesoderm | 2.88e-10 | 315 |
mesoderm-derived structure | 2.88e-10 | 315 |
presumptive mesoderm | 2.88e-10 | 315 |
connective tissue | 6.14e-10 | 371 |
cranial nerve II | 5.82e-08 | 1 |
cranial nerve | 5.82e-08 | 1 |
nerve trunk | 5.82e-08 | 1 |
nerve connecting eye with brain | 5.82e-08 | 1 |
nerve | 5.82e-08 | 1 |
retinal neural layer | 5.82e-08 | 1 |
presumptive neural retina | 5.82e-08 | 1 |