FFCP PHASE1:Hg19::chr13:34922094..34922105,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:34922094..34922105,+ | |||
|coexpression_cluster_id=C372 | |coexpression_cluster_id=C372 | ||
|description=CAGE_peak_at_chr13:34922094..34922105,+ | |description=CAGE_peak_at_chr13:34922094..34922105,+ | ||
|id=chr13:34922094..34922105,+ | |id=chr13:34922094..34922105,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.62e-23;3!UBERON:0003057;2.62e-23;3!UBERON:0006601;7.35e-07;82 | |||
|ontology_enrichment_disease=DOID:5662!4.08e-07!1 | |ontology_enrichment_disease=DOID:5662!4.08e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.26e-37!57;UBERON:0005068!2.26e-37!57;UBERON:0006241!2.26e-37!57;UBERON:0007135!2.26e-37!57;UBERON:0002298!3.55e-37!8;UBERON:0003076!8.16e-32!15;UBERON:0003057!8.16e-32!15;UBERON:0007023!6.10e-30!115;UBERON:0002616!1.27e-28!59;UBERON:0005743!2.01e-28!86;UBERON:0001017!3.41e-27!82;UBERON:0000955!1.83e-26!69;UBERON:0006238!1.83e-26!69;UBERON:0003075!4.70e-26!86;UBERON:0007284!4.70e-26!86;UBERON:0000073!2.34e-25!94;UBERON:0001016!2.34e-25!94;UBERON:0002346!1.03e-24!90;UBERON:0004733!2.90e-24!12;UBERON:0002028!2.90e-24!12;UBERON:0007277!2.90e-24!12;UBERON:0004732!2.48e-22!13;UBERON:0001896!2.40e-19!3;UBERON:0005290!2.40e-19!3;UBERON:0010096!2.40e-19!3;UBERON:0006331!3.06e-19!3;UBERON:0000988!4.15e-19!3;UBERON:0000033!1.47e-18!123;UBERON:0000153!1.69e-17!129;UBERON:0007811!1.69e-17!129;UBERON:0004121!1.02e-16!169;UBERON:0000924!3.21e-16!173;UBERON:0006601!3.21e-16!173;UBERON:0002780!4.68e-15!41;UBERON:0001890!4.68e-15!41;UBERON:0006240!4.68e-15!41;UBERON:0003080!1.17e-14!42;UBERON:0002148!2.71e-13!2;UBERON:0009662!2.71e-13!2;UBERON:0001870!9.05e-13!2;UBERON:0002020!2.96e-12!34;UBERON:0003528!2.96e-12!34;UBERON:0003056!2.12e-11!61;UBERON:0002680!4.92e-11!9;UBERON:0001895!4.92e-11!9;UBERON:0010092!4.92e-11!9;UBERON:0002308!5.32e-11!9;UBERON:0000125!5.32e-11!9;UBERON:0000025!2.64e-10!194;UBERON:0002791!5.92e-10!33;UBERON:0001893!1.23e-09!34;UBERON:0004111!2.34e-09!241;UBERON:0002240!2.51e-09!3;UBERON:0000475!6.26e-09!365;UBERON:0001894!2.22e-08!7;UBERON:0006222!2.22e-08!7;UBERON:0000477!5.96e-08!286;UBERON:0002038!1.12e-07!1;UBERON:0009661!1.12e-07!1;UBERON:0002702!1.36e-07!1;UBERON:0002336!1.97e-07!1;UBERON:0001018!1.97e-07!1;UBERON:0002473!1.97e-07!1;UBERON:0005340!1.97e-07!1;UBERON:0002316!1.97e-07!1;UBERON:0003544!1.97e-07!1;UBERON:0001020!1.97e-07!1;UBERON:0005970!1.97e-07!1;UBERON:0002437!1.97e-07!1;UBERON:0001736!2.23e-07!1;UBERON:0006298!2.23e-07!1;UBERON:0006834!5.19e-07!1;UBERON:0000483!6.10e-07!309;UBERON:0002581!6.20e-07!1;UBERON:0000119!7.95e-07!312;UBERON:0001950!9.01e-07!20 | |ontology_enrichment_uberon=UBERON:0001049!2.26e-37!57;UBERON:0005068!2.26e-37!57;UBERON:0006241!2.26e-37!57;UBERON:0007135!2.26e-37!57;UBERON:0002298!3.55e-37!8;UBERON:0003076!8.16e-32!15;UBERON:0003057!8.16e-32!15;UBERON:0007023!6.10e-30!115;UBERON:0002616!1.27e-28!59;UBERON:0005743!2.01e-28!86;UBERON:0001017!3.41e-27!82;UBERON:0000955!1.83e-26!69;UBERON:0006238!1.83e-26!69;UBERON:0003075!4.70e-26!86;UBERON:0007284!4.70e-26!86;UBERON:0000073!2.34e-25!94;UBERON:0001016!2.34e-25!94;UBERON:0002346!1.03e-24!90;UBERON:0004733!2.90e-24!12;UBERON:0002028!2.90e-24!12;UBERON:0007277!2.90e-24!12;UBERON:0004732!2.48e-22!13;UBERON:0001896!2.40e-19!3;UBERON:0005290!2.40e-19!3;UBERON:0010096!2.40e-19!3;UBERON:0006331!3.06e-19!3;UBERON:0000988!4.15e-19!3;UBERON:0000033!1.47e-18!123;UBERON:0000153!1.69e-17!129;UBERON:0007811!1.69e-17!129;UBERON:0004121!1.02e-16!169;UBERON:0000924!3.21e-16!173;UBERON:0006601!3.21e-16!173;UBERON:0002780!4.68e-15!41;UBERON:0001890!4.68e-15!41;UBERON:0006240!4.68e-15!41;UBERON:0003080!1.17e-14!42;UBERON:0002148!2.71e-13!2;UBERON:0009662!2.71e-13!2;UBERON:0001870!9.05e-13!2;UBERON:0002020!2.96e-12!34;UBERON:0003528!2.96e-12!34;UBERON:0003056!2.12e-11!61;UBERON:0002680!4.92e-11!9;UBERON:0001895!4.92e-11!9;UBERON:0010092!4.92e-11!9;UBERON:0002308!5.32e-11!9;UBERON:0000125!5.32e-11!9;UBERON:0000025!2.64e-10!194;UBERON:0002791!5.92e-10!33;UBERON:0001893!1.23e-09!34;UBERON:0004111!2.34e-09!241;UBERON:0002240!2.51e-09!3;UBERON:0000475!6.26e-09!365;UBERON:0001894!2.22e-08!7;UBERON:0006222!2.22e-08!7;UBERON:0000477!5.96e-08!286;UBERON:0002038!1.12e-07!1;UBERON:0009661!1.12e-07!1;UBERON:0002702!1.36e-07!1;UBERON:0002336!1.97e-07!1;UBERON:0001018!1.97e-07!1;UBERON:0002473!1.97e-07!1;UBERON:0005340!1.97e-07!1;UBERON:0002316!1.97e-07!1;UBERON:0003544!1.97e-07!1;UBERON:0001020!1.97e-07!1;UBERON:0005970!1.97e-07!1;UBERON:0002437!1.97e-07!1;UBERON:0001736!2.23e-07!1;UBERON:0006298!2.23e-07!1;UBERON:0006834!5.19e-07!1;UBERON:0000483!6.10e-07!309;UBERON:0002581!6.20e-07!1;UBERON:0000119!7.95e-07!312;UBERON:0001950!9.01e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;3.34e-66;1!UBERON:0009661;3.34e-66;1!UBERON:0002950;3.34e-66;1!UBERON:0001891;3.34e-66;1!UBERON:0002148;5.96e-34;2!UBERON:0006331;5.96e-34;2!UBERON:0009662;5.96e-34;2!UBERON:0000125;3.59e-30;9!UBERON:0002308;3.59e-30;9!UBERON:0002240;2.62e-23;3!UBERON:0005174;2.62e-23;3!UBERON:0001137;2.62e-23;3!UBERON:0000988;3.66e-23;3!UBERON:0002298;2.59e-12;6!UBERON:0009663;9.43e-11;7!UBERON:0002680;1.16e-08;9!UBERON:0002420;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0001895;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9!UBERON:0004733;8.14e-07;12!UBERON:0002028;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.66e-66,1;UBERON:0009661,4.66e-66,1;UBERON:0002950,4.66e-66,1;UBERON:0001891,4.66e-66,1;UBERON:0009616,4.66e-66,1;UBERON:0010286,4.66e-66,1;UBERON:0002148,5.04e-34,2;UBERON:0006331,5.04e-34,2;UBERON:0009662,5.04e-34,2;UBERON:0000125,3.59e-30,9;UBERON:0002308,3.59e-30,9;UBERON:0002240,2.62e-23,3;UBERON:0005174,2.62e-23,3;UBERON:0001137,2.62e-23,3;UBERON:0000988,3.27e-23,3;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15;UBERON:0002298,2.45e-12,6;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0009663,9.89e-11,7;UBERON:0002680,1.12e-08,9;UBERON:0001895,1.12e-08,9;UBERON:0010092,1.12e-08,9;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0002420,1.21e-08,9;UBERON:0007245,1.21e-08,9;UBERON:0010009,1.21e-08,9;UBERON:0010011,1.21e-08,9;UBERON:0000454,1.21e-08,9;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0004733,7.92e-07,12;UBERON:0002028,7.92e-07,12;UBERON:0007277,7.92e-07,12 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0.573409195690071,0.998361463831671,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0.171488009437418,0.611727596791485,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,5.34683520588755,0,0,0,0,0,0,0,0.160482733378337,0,0.458729283404541,1.14671666521161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0.573409195690071,0.998361463831671,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0.171488009437418,0.611727596791485,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,5.34683520588755,0,0,0,0,0,0,0,0.160482733378337,0,0.458729283404541,1.14671666521161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr13:34922094..34922105,+ | |short_description=p@chr13:34922094..34922105,+ | ||
}} | }} |
Latest revision as of 15:44, 24 July 2015
Short description: | p@chr13:34922094..34922105, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:34922094..34922105, + |
Coexpression cluster: | C372_spinal_medulla_substantia_locus_thalamus_corpus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data