FFCP PHASE1:Hg19::chr14:61112231..61112235,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:61112231..61112235,- | |||
|description=CAGE_peak_at_chr14:61112231..61112235,- | |description=CAGE_peak_at_chr14:61112231..61112235,- | ||
|id=chr14:61112231..61112235,- | |id=chr14:61112231..61112235,- | ||
|ontology_enrichment_celltype=CL:0000499!1.27e-11!27;CL:0000327!2.15e-07!14;CL:0000153!4.13e-07!9;CL:0000447!4.13e-07!9 | |ontology_enrichment_celltype=CL:0000499!1.27e-11!27;CL:0000327!2.15e-07!14;CL:0000153!4.13e-07!9;CL:0000447!4.13e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000197;6.93e-15;6!CL:0000098;6.93e-15;6!CL:0002167;6.93e-15;6!CL:0000153;6.52e-10;9!CL:0000447;6.52e-10;9!CL:0000327;8.01e-09;15!CL:0000499;1.85e-08;28!CL:0002540;2.57e-08;6!CL:0002564;3.18e-08;3!CL:0000214;3.48e-08;3!CL:0000515;4.88e-08;3!CL:0000135;7.71e-08;3!CL:0000388;7.71e-08;3!CL:0000319;8.48e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,4.78e-15,6;CL:0000098,4.78e-15,6;CL:0002167,4.78e-15,6;CL:0000153,8.24e-10,9;CL:0000447,8.24e-10,9;CL:0000327,1.05e-08,15;CL:0000499,2.25e-08,28;CL:0002564,2.86e-08,3;CL:0002540,3.96e-08,6;CL:0000214,5.07e-08,3;CL:0000135,7.72e-08,3;CL:0000388,7.72e-08,3;CL:0000319,8.97e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;4.08e-07;1!UBERON:0003852;4.08e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;8.48e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.97e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;5.29e-17;8!UBERON:0000982;5.29e-17;8!UBERON:0004770;5.29e-17;8!UBERON:0000075;7.28e-12;16!UBERON:0011135;1.54e-10;5!UBERON:0002216;1.54e-10;5!UBERON:0011134;1.54e-10;5!UBERON:0002209;1.54e-10;5!UBERON:0002213;1.54e-10;5!UBERON:0007844;1.54e-10;5!UBERON:0011138;1.54e-10;5!UBERON:0001130;1.54e-10;5!UBERON:0001066;1.54e-10;5!UBERON:0001468;1.54e-10;5!UBERON:0001434;3.58e-10;36!UBERON:0002204;2.21e-09;70!UBERON:0004765;2.69e-09;26!UBERON:0002242;3.18e-08;3!UBERON:0006915;3.48e-08;3!UBERON:0007616;3.48e-08;3!UBERON:0002217;3.48e-08;3!UBERON:0002018;3.48e-08;3!UBERON:0007846;7.71e-08;3!UBERON:0000043;7.71e-08;3!UBERON:0007845;7.71e-08;3!UBERON:0005705;4.08e-07;1!UBERON:0008193;4.08e-07;1!UBERON:0010912;4.08e-07;1!UBERON:0002514;4.08e-07;1!UBERON:0003457;4.08e-07;1!UBERON:0008907;4.08e-07;1!UBERON:0008001;4.08e-07;1!UBERON:0007213;4.08e-07;1!UBERON:0009891;4.08e-07;1!UBERON:0007914;4.08e-07;1!UBERON:0007375;4.08e-07;1!UBERON:0003323;4.08e-07;1!UBERON:0010258;4.08e-07;1!UBERON:0005253;4.08e-07;1!UBERON:0007842;4.08e-07;1!UBERON:0002397;4.08e-07;1!UBERON:0003113;4.08e-07;1!UBERON:0003277;4.08e-07;1!UBERON:0001709;4.08e-07;1!UBERON:0002244;4.08e-07;1!UBERON:0005620;4.08e-07;1!UBERON:0010364;4.08e-07;1!UBERON:0004288;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,7.17e-17,8;UBERON:0000982,7.17e-17,8;UBERON:0004770,7.17e-17,8;UBERON:0000075,6.89e-12,16;UBERON:0011135,1.47e-10,5;UBERON:0002216,1.47e-10,5;UBERON:0011134,1.47e-10,5;UBERON:0002209,1.47e-10,5;UBERON:0002213,1.47e-10,5;UBERON:0005856,1.47e-10,5;UBERON:0005866,1.47e-10,5;UBERON:0005863,1.47e-10,5;UBERON:0007844,1.47e-10,5;UBERON:0011138,1.47e-10,5;UBERON:0001130,1.47e-10,5;UBERON:0001066,1.47e-10,5;UBERON:0001468,1.47e-10,5;UBERON:0011137,1.25e-09,14;UBERON:0002242,2.86e-08,3;UBERON:0003068,2.86e-08,3;UBERON:0002328,2.86e-08,3;UBERON:0004880,2.86e-08,3;UBERON:0006915,5.07e-08,3;UBERON:0007616,5.07e-08,3;UBERON:0002217,5.07e-08,3;UBERON:0002018,5.07e-08,3;UBERON:0007846,7.72e-08,3;UBERON:0000043,7.72e-08,3;UBERON:0007845,7.72e-08,3;UBERON:0005705,4.09e-07,1;UBERON:0008193,4.09e-07,1;UBERON:0010912,4.09e-07,1;UBERON:0002514,4.09e-07,1;UBERON:0003457,4.09e-07,1;UBERON:0008907,4.09e-07,1;UBERON:0008001,4.09e-07,1;UBERON:0007213,4.09e-07,1;UBERON:0009891,4.09e-07,1;UBERON:0007914,4.09e-07,1;UBERON:0009292,4.09e-07,1;UBERON:0003099,4.09e-07,1;UBERON:0007375,4.09e-07,1;UBERON:0003323,4.09e-07,1;UBERON:0010258,4.09e-07,1;UBERON:0007842,4.09e-07,1;UBERON:0009494,4.09e-07,1;UBERON:0010042,4.09e-07,1;UBERON:0010045,4.09e-07,1;UBERON:0010259,4.09e-07,1;UBERON:0010359,4.09e-07,1;UBERON:0009526,4.09e-07,1;UBERON:0002397,4.09e-07,1;UBERON:0003113,4.09e-07,1;UBERON:0003277,4.09e-07,1;UBERON:0001709,4.09e-07,1;UBERON:0004066,4.09e-07,1;UBERON:0002244,4.09e-07,1;UBERON:0005620,4.09e-07,1;UBERON:0004362,4.09e-07,1;UBERON:0010364,4.09e-07,1;UBERON:0010046,4.09e-07,1;UBERON:0005868,4.09e-07,1;UBERON:0007238,4.09e-07,1;UBERON:0004288,4.09e-07,1;UBERON:0004068,4.09e-07,1;UBERON:0010334,4.09e-07,1;UBERON:0003852,4.09e-07,1;UBERON:0010253,4.09e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,4.33182235360163,0.331397375727916,0,0,0,0,0,0.408001382488506,0.940364164434263,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,3.33146993609895,0,2.43317435151318,0.567208902984407,0.443458794925128,0.702678285545008,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0,0,0,1.12135520028461,0,0,0,0,0,0,0.576175924479999,0,0,0,0.597794722207204,0,0,0,0.816616685019573,4.79053837515895,0,1.18800285728205,0.989067717114227,0,0,3.19838616512726,0.500474079487857,0,0,1.5324389789951,0.600952235626387,0,0,0.640672166455702,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,1.44375896333917,0.354920400119532,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,1.24675085895615,0,0,1.690605505112,0,0,1.02882949704857,1.41849132023278,1.3321108950805,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,1.4377491329495,0,0,2.46128221334885,1.84928690295345,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,5.39842563564216,1.50051156317903,0.271265023699736,4.78332981520856,3.56857977594324,3.31175071571263,1.7571212248907,0.300946099727719,0,0,0,0.184369168541703,0.868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0,0.200506470303285,0.368323955743585,0.459257792658427,0.728364672026868,0.786746489756545,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,1.83674364755032,0.308097234229289,0.15350367472613,0,0.751941714077915,0.435050081742686,0.93749290157711,0.534192213880424,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,3.72158369359667,0.632758849437452,0,0.767693373934002,0.42793898803392,0,0,0.359744915166629,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,4.43326034125095,0.329294892959902,0,0,0.288666338176536,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11443384277478,0.568272293612826,0,0,0,0,0,0.779160935160341,0.16480387422676,0.422250816255987,0,0,0.503865495708552,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,0.254253650292766,0.236387681767936,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0.370691816839509,0.104421949505455,0,0,0,0,0,0.485560759068186,0,0,0,0.31593289814244,0.60129367765797,0.414752765588989,0,0.992975867626496,0,0,0,0,0.520679215005393,0.293977192243133,0.0870592065804026,0,1.37588825977293,0.19351266257817,0.0730893170861856,0,0,0.0882561266915003,0.225980740780532,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0.611989305817931,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.919036730290385,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0.705797459094515,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20022211730523,0.686791410365586,1.6837474438296,0,0,0,0,0.226705925512272,0,0.734210113519403,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,1.63804924423206,2.21195617878347,0,0,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,7.05351887381368,0.6124909547064,0,0,0,0,0,0,0,0,0.294443155503077,0.825788063434183,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0,0.236387681767936,0.778619813244484,0,0,0,0,0,0,0,0,0.348724276104376,0.869291361512897,0,0.414432328326074,0.17071847709395,0,0,0.236664001461131,0,0,0.22910686854405,0,0.955538938977433,0.111855431797792,0,0,0,0.718639647993729,0,0,0.701818390386317,0,0.118920090777569,0.11294608203896,0,0.452888530700021,0,0,0,0,0,0,0,0.4226557275834,0.679708458751268,0,0,0,0.357107877211315,0,0.320965466756673,0,0,0,1.10440093535229,0,0,0,1.48798007266701,1.38652688589425,0,0,0,0,0,0,0,0,0.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| ||
|short_description=p@chr14:61112231..61112235,- | |short_description=p@chr14:61112231..61112235,- | ||
}} | }} |
Latest revision as of 21:34, 24 July 2015
Short description: | p@chr14:61112231..61112235, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:61112231..61112235, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 4.78e-15 | 6 |
sensory epithelial cell | 4.78e-15 | 6 |
olfactory epithelial cell | 4.78e-15 | 6 |
GAG secreting cell | 8.24e-10 | 9 |
carbohydrate secreting cell | 8.24e-10 | 9 |
extracellular matrix secreting cell | 1.05e-08 | 15 |
stromal cell | 2.25e-08 | 28 |
nucleus pulposus cell of intervertebral disc | 2.86e-08 | 3 |
mesenchymal stem cell of the bone marrow | 3.96e-08 | 6 |
synovial cell | 5.07e-08 | 3 |
fibrocyte | 7.72e-08 | 3 |
tendon cell | 7.72e-08 | 3 |
mucus secreting cell | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.97e-07 | 1 |