FFCP PHASE1:Hg19::chr15:59469780..59469790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:59469780..59469790,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr15:59469780..59469790,+ | |description=CAGE_peak_at_chr15:59469780..59469790,+ | ||
|id=chr15:59469780..59469790,+ | |id=chr15:59469780..59469790,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.23e-99!42;CL:0000860!7.34e-92!45;CL:0002009!1.61e-82!65;CL:0002194!2.90e-81!63;CL:0000576!2.90e-81!63;CL:0000040!2.90e-81!63;CL:0000559!2.90e-81!63;CL:0000766!4.29e-77!76;CL:0000557!9.10e-75!71;CL:0000839!3.13e-72!70;CL:0000763!1.41e-51!112;CL:0000049!1.41e-51!112;CL:0000738!3.56e-41!140;CL:0002087!1.18e-40!119;CL:0002031!1.29e-38!124;CL:0002032!1.30e-31!165;CL:0000837!1.30e-31!165;CL:0000037!1.65e-31!172;CL:0000566!1.65e-31!172;CL:0000988!3.51e-29!182;CL:0002393!8.92e-13!9;CL:0002397!8.92e-13!9;CL:0000767!2.26e-11!3;CL:0000134!1.53e-09!358;CL:0002320!3.70e-09!365;CL:0000219!8.25e-08!390 | |ontology_enrichment_celltype=CL:0002057!4.23e-99!42;CL:0000860!7.34e-92!45;CL:0002009!1.61e-82!65;CL:0002194!2.90e-81!63;CL:0000576!2.90e-81!63;CL:0000040!2.90e-81!63;CL:0000559!2.90e-81!63;CL:0000766!4.29e-77!76;CL:0000557!9.10e-75!71;CL:0000839!3.13e-72!70;CL:0000763!1.41e-51!112;CL:0000049!1.41e-51!112;CL:0000738!3.56e-41!140;CL:0002087!1.18e-40!119;CL:0002031!1.29e-38!124;CL:0002032!1.30e-31!165;CL:0000837!1.30e-31!165;CL:0000037!1.65e-31!172;CL:0000566!1.65e-31!172;CL:0000988!3.51e-29!182;CL:0002393!8.92e-13!9;CL:0002397!8.92e-13!9;CL:0000767!2.26e-11!3;CL:0000134!1.53e-09!358;CL:0002320!3.70e-09!365;CL:0000219!8.25e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.46e-98;33!CL:0002057;2.46e-98;33!CL:0000473;2.61e-68;39!CL:0000234;2.61e-68;39!CL:0000576;2.04e-47;48!CL:0000766;5.88e-32;69!CL:0000767;2.53e-23;3!CL:0000763;1.01e-13;100!CL:0002087;1.06e-11;104!CL:0000094;4.21e-09;8!CL:0000738;4.02e-08;136!CL:0000081;9.56e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.91e-85,42;CL:0002057,3.91e-85,42;CL:0000473,4.68e-74,48;CL:0000234,4.68e-74,48;CL:0000766,4.94e-62,72;CL:0002194,1.54e-58,59;CL:0000576,1.54e-58,59;CL:0000040,1.54e-58,59;CL:0000559,1.54e-58,59;CL:0002009,1.55e-56,61;CL:0000839,4.75e-52,66;CL:0000557,3.13e-51,67;CL:0000763,2.62e-40,108;CL:0000049,2.62e-40,108;CL:0000738,2.75e-31,136;CL:0002087,1.61e-28,115;CL:0002031,3.47e-27,120;CL:0002032,7.36e-26,161;CL:0000837,7.36e-26,161;CL:0000037,1.26e-24,168;CL:0000767,2.34e-23,3;CL:0000988,3.50e-23,177;CL:0000134,1.39e-09,354;CL:0002320,2.57e-09,361;CL:0000094,4.10e-09,8;CL:0000219,2.26e-08,386;CL:0000048,3.24e-07,427;CL:0000723,4.68e-07,433;CL:0000034,7.54e-07,441;CL:0000081,9.37e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.95e-64;42!CL:0000049;1.10e-11;108!UBERON:0005425;9.17e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.72e-65!80;UBERON:0001474!4.59e-60!86;UBERON:0002390!1.08e-51!102;UBERON:0003061!1.08e-51!102;UBERON:0004765!1.10e-49!101;UBERON:0001434!1.10e-49!101;UBERON:0002193!3.55e-46!112;UBERON:0002405!2.01e-42!115;UBERON:0002204!4.62e-26!167;UBERON:0003081!5.51e-19!216;UBERON:0006331!8.14e-10!3;UBERON:0002384!1.23e-08!375;UBERON:0000062!6.39e-08!511;UBERON:0005162!1.89e-07!2;UBERON:0000122!1.89e-07!2;UBERON:0002148!4.55e-07!2;UBERON:0009662!4.55e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.17e-09;1!UBERON:0001785;9.17e-09;1!UBERON:0002464;9.17e-09;1!UBERON:0004904;9.17e-09;1!UBERON:0001021;9.17e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.02e-45,76;UBERON:0001474,2.55e-41,82;UBERON:0004765,2.29e-37,90;UBERON:0002405,4.66e-36,93;UBERON:0002390,4.73e-34,98;UBERON:0003061,4.73e-34,98;UBERON:0001434,2.65e-33,100;UBERON:0002193,1.37e-30,108;UBERON:0002204,1.59e-18,167;UBERON:0003081,1.41e-14,203;UBERON:0002384,5.96e-09,371;UBERON:0000941,8.49e-09,1;UBERON:0001785,8.49e-09,1;UBERON:0002464,8.49e-09,1;UBERON:0004904,8.49e-09,1;UBERON:0001021,8.49e-09,1;UBERON:0003902,8.49e-09,1;UBERON:0005425,8.49e-09,1;UBERON:0000926,5.16e-08,315;UBERON:0004120,5.16e-08,315;UBERON:0006603,5.16e-08,315 | |||
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| ||
|short_description=p@chr15:59469780..59469790,+ | |short_description=p@chr15:59469780..59469790,+ | ||
}} | }} |
Latest revision as of 02:59, 25 July 2015
Short description: | p@chr15:59469780..59469790, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:59469780..59469790, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.91e-85 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.91e-85 | 42 |
defensive cell | 4.68e-74 | 48 |
phagocyte | 4.68e-74 | 48 |
myeloid leukocyte | 4.94e-62 | 72 |
monopoietic cell | 1.54e-58 | 59 |
monocyte | 1.54e-58 | 59 |
monoblast | 1.54e-58 | 59 |
promonocyte | 1.54e-58 | 59 |
macrophage dendritic cell progenitor | 1.55e-56 | 61 |
myeloid lineage restricted progenitor cell | 4.75e-52 | 66 |
granulocyte monocyte progenitor cell | 3.13e-51 | 67 |
myeloid cell | 2.62e-40 | 108 |
common myeloid progenitor | 2.62e-40 | 108 |
leukocyte | 2.75e-31 | 136 |
nongranular leukocyte | 1.61e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 3.47e-27 | 120 |
hematopoietic oligopotent progenitor cell | 7.36e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.36e-26 | 161 |
hematopoietic stem cell | 1.26e-24 | 168 |
basophil | 2.34e-23 | 3 |
hematopoietic cell | 3.50e-23 | 177 |
mesenchymal cell | 1.39e-09 | 354 |
connective tissue cell | 2.57e-09 | 361 |
granulocyte | 4.10e-09 | 8 |
motile cell | 2.26e-08 | 386 |
multi fate stem cell | 3.24e-07 | 427 |
somatic stem cell | 4.68e-07 | 433 |
stem cell | 7.54e-07 | 441 |
blood cell | 9.37e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.02e-45 | 76 |
bone element | 2.55e-41 | 82 |
skeletal element | 2.29e-37 | 90 |
immune system | 4.66e-36 | 93 |
hematopoietic system | 4.73e-34 | 98 |
blood island | 4.73e-34 | 98 |
skeletal system | 2.65e-33 | 100 |
hemolymphoid system | 1.37e-30 | 108 |
musculoskeletal system | 1.59e-18 | 167 |
lateral plate mesoderm | 1.41e-14 | 203 |
connective tissue | 5.96e-09 | 371 |
cranial nerve II | 8.49e-09 | 1 |
cranial nerve | 8.49e-09 | 1 |
nerve trunk | 8.49e-09 | 1 |
nerve connecting eye with brain | 8.49e-09 | 1 |
nerve | 8.49e-09 | 1 |
retinal neural layer | 8.49e-09 | 1 |
presumptive neural retina | 8.49e-09 | 1 |
mesoderm | 5.16e-08 | 315 |
mesoderm-derived structure | 5.16e-08 | 315 |
presumptive mesoderm | 5.16e-08 | 315 |