FFCP PHASE1:Hg19::chr17:27621306..27621324,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:27621306..27621324,+
|short_description=p@chr17:27621306..27621324,+
|description=CAGE_peak_at_chr17:27621306..27621324,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:27621306..27621324,+ | |||
|description=CAGE_peak_at_chr17:27621306..27621324,+ | |||
|id=chr17:27621306..27621324,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.41e-27!140;CL:0000037!2.44e-27!172;CL:0000566!2.44e-27!172;CL:0000988!2.46e-25!182;CL:0002087!8.28e-25!119;CL:0002032!2.32e-24!165;CL:0000837!2.32e-24!165;CL:0002031!2.68e-24!124;CL:0002057!9.10e-20!42;CL:0000860!2.45e-19!45;CL:0000557!2.88e-13!71;CL:0002009!1.38e-12!65;CL:0000542!2.17e-12!53;CL:0000051!2.17e-12!53;CL:0000763!2.37e-12!112;CL:0000049!2.37e-12!112;CL:0000766!5.37e-12!76;CL:0000838!5.62e-12!52;CL:0000839!8.53e-12!70;CL:0002194!8.85e-12!63;CL:0000576!8.85e-12!63;CL:0000040!8.85e-12!63;CL:0000559!8.85e-12!63;CL:0000003!4.87e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.86e-18;33!CL:0002057;1.86e-18;33!CL:0000473;1.70e-13;39!CL:0000234;1.70e-13;39!CL:0000791;2.22e-13;18!CL:0000789;2.22e-13;18!CL:0002419;2.22e-13;18!CL:0000576;1.35e-12;48!CL:0000084;5.72e-11;25!CL:0000898;1.96e-09;3!CL:0002087;2.05e-09;104!CL:0000623;2.75e-09;3!CL:0000767;4.93e-09;3!CL:0000624;3.83e-08;6!CL:0000766;1.72e-07;69!CL:0000542;5.13e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.23e-28,136;CL:0002087,5.53e-26,115;CL:0000037,2.14e-25,168;CL:0000988,1.05e-24,177;CL:0002031,1.39e-24,120;CL:0000860,2.34e-23,42;CL:0002057,2.34e-23,42;CL:0002032,6.47e-23,161;CL:0000837,6.47e-23,161;CL:0000473,1.00e-19,48;CL:0000234,1.00e-19,48;CL:0002009,2.15e-17,61;CL:0000766,6.88e-17,72;CL:0000557,7.23e-17,67;CL:0002194,2.46e-16,59;CL:0000576,2.46e-16,59;CL:0000040,2.46e-16,59;CL:0000559,2.46e-16,59;CL:0000839,4.99e-14,66;CL:0000791,6.50e-14,18;CL:0000789,6.50e-14,18;CL:0002420,6.50e-14,18;CL:0002419,6.50e-14,18;CL:0000790,6.50e-14,18;CL:0000763,2.43e-13,108;CL:0000049,2.43e-13,108;CL:0000084,2.71e-11,25;CL:0000827,2.71e-11,25;CL:0000838,7.89e-10,52;CL:0000898,1.09e-09,3;CL:0000542,1.43e-09,53;CL:0000051,1.43e-09,53;CL:0000623,2.05e-09,3;CL:0000825,2.05e-09,3;CL:0000767,3.58e-09,3;CL:0000624,2.72e-08,6;CL:0002320,3.08e-07,361;CL:0000134,4.28e-07,354;CL:0000815,6.82e-07,2;CL:0000792,6.82e-07,2;CL:0002677,6.82e-07,2;CL:0000893,7.87e-07,2;CL:0002489,7.87e-07,2;CL:0000809,7.87e-07,2;CL:0000808,7.87e-07,2;CL:0000894,7.87e-07,2;CL:0000806,7.87e-07,2;CL:0000807,7.87e-07,2;CL:0000805,7.87e-07,2;CL:0002425,7.87e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.75e-19;42!CL:0000790;2.22e-13;18!CL:0000051;5.13e-07;53!CL:0002425;9.53e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.22e-13!102;UBERON:0003061!1.22e-13!102;UBERON:0002371!1.30e-12!80;UBERON:0002193!5.84e-12!112;UBERON:0001474!1.81e-11!86;UBERON:0002405!1.73e-08!115;UBERON:0004765!3.28e-08!101;UBERON:0001434!3.28e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.18e-18,98;UBERON:0003061,1.18e-18,98;UBERON:0002193,3.48e-16,108;UBERON:0002371,1.18e-15,76;UBERON:0002405,1.29e-15,93;UBERON:0001474,4.75e-14,82;UBERON:0004765,2.17e-13,90;UBERON:0001434,2.06e-11,100;UBERON:0003081,1.51e-07,203;UBERON:0002370,2.52e-07,4;UBERON:0005058,2.52e-07,4;UBERON:0009113,2.52e-07,4;UBERON:0003295,2.52e-07,4;UBERON:0005562,2.52e-07,4;UBERON:0002384,9.67e-07,371 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0,0,0.626909442956176,0.286235987131057,0.410623275218653,0,0.305653622991805,0.246301768349837,0.236132343941038,3.14691421479123,1.53531759238885,1.54816123316076,0,0.6024118375565,0.369754010166788,0.232401601740905,0,2.05520307534393,0.553995408531877,1.20326668482085,0.868043482863407,0,0,0,1.16318591023652,0,0.242584061187816,1.39457422143411,0.822335776043652,1.54853185447552,1.1507695692886,1.2808035326455,2.12834006899727,1.72372840368309,0.645484683583826,5.41705946377367,1.69418105588344,0.818718450173537,0.674170453335254,0.918251677112708,0.320929027076094,0.639337125799041,1.31940520074686,1.99463657621632,2.55734850319616,1.7412554317715,0,1.24564449799115,0.75374599577023,2.08593167368081,2.6062661364614,2.42159801053347,0.736555271975129,0.949387162322653,0.211255286311942,0.637812899895131,1.25795187305026,0.561643155732475,0.901061357049038,0.803627933485401,0.570025487482497,1.39241674039363,1.82664153764634,0,0.546138611262131,1.77901850772711,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0.526768169550154,0.786839080455332,0,3.08402248499264,0.501559486172034,2.60737813306872,0.946895611469467,3.89653456815823,0.557052284425868,1.76763544484902,2.21533894583621,1.08321545506006,1.40900451698243,0.650296737799391,0.822189523018381,0.552700035571697,0.289803085735052,2.22429844743091,0.802622484269139,0,0.679856056185397,3.06576394881537,2.74901956386104,1.01207876807801,0.318565414324097,0,1.90090408889675,1.05402583354441,0.383959833463255,0,0.236777252044017,1.64225599384209,1.81446068902259,1.87208137048455,0.724122019413995,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.130979075497713,0.728590576585084,0.370784442784429,0,0.174129737299267,0.132957960518865,1.66943437013739,1.14398982156026,0.74291500265913,0.198762407366705,0,0,0,0.419499436209906,0,0.417989933073621,0,0.71153252537342,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0,0.554128230968366,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0.323292113637624,0,0.10075209822764,0,0,0,0,0.609868530647977,0.530119073285941,0.929551542956147,0.621966330092223,0,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0,0.220587945464788,0.435758888184812,0,0.269662616320329,0.392442930250692,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0.462985512576611,0.190254152234598,0.790204397959275,2.57545848628462,0,0,0,0,0,0.283550194484773,0,0,0,0,0.088048434013226,0.829312462163088,0.288239906833923,0.50496973370552,0,0.381988425558278,2.34434894420094,0,0.102827492703324,0,0,0.224262168690721,0,0,0.129271715757778,3.57656445851882,0,0,0,0.514414748524284,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,2.56139988262505,2.37190332345469,1.54011643535698,0,0,0,0.167516265334349,0,0,0,0.828831026872071,0.12269149171914,1.00034104211935,0,0.207970861530807,0,0.473107245101804,0,0.300946099727719,0,0,0,0,0.260650843404249,0.391602314925481,0,1.44737618286021,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0.462629081407967,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0.40101294060657,0,0.114814448164607,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,1.54227252690289,0,1.00337954770971,0,0.831076008928724,0.223874754722178,0,0.522870902049801,0.256450125116389,0.656029291399411,0,0.103041011647722,0.366277859273374,0.165018999841176,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.267096106940212,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,2.11300293513511,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0,0.709522128141196,0.211107635297664,0,0,0.349934720244983,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,1.62009431171434,0,0.106824071127473,0,0,0.743212700502875,0.577076851905779,0.142283686696828,0.159426272728822,0.199579371432817,0.191505370132367,0.423347165447766,0,0.561594356226918,0.228234679033192,0,0,0,0.321176150207399,0.605399121573143,0.425846237690326,0.343505344755765,0.614481528616916,0,0.834245708559542,0,0,1.23087398947712,0,0,0,0.37428108081644,0.146508179271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| ||
|short_description=p@chr17:27621306..27621324,+ | |||
}} | }} |
Latest revision as of 15:10, 25 July 2015
Short description: | p@chr17:27621306..27621324, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27621306..27621324, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.18e-18 | 98 |
blood island | 1.18e-18 | 98 |
hemolymphoid system | 3.48e-16 | 108 |
bone marrow | 1.18e-15 | 76 |
immune system | 1.29e-15 | 93 |
bone element | 4.75e-14 | 82 |
skeletal element | 2.17e-13 | 90 |
skeletal system | 2.06e-11 | 100 |
lateral plate mesoderm | 1.51e-07 | 203 |
thymus | 2.52e-07 | 4 |
hemolymphoid system gland | 2.52e-07 | 4 |
thymic region | 2.52e-07 | 4 |
pharyngeal gland | 2.52e-07 | 4 |
thymus primordium | 2.52e-07 | 4 |
connective tissue | 9.67e-07 | 371 |