FFCP PHASE1:Hg19::chr17:77019030..77019042,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77019030..77019042,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr17:77019030..77019042,+ | |description=CAGE_peak_at_chr17:77019030..77019042,+ | ||
|id=chr17:77019030..77019042,+ | |id=chr17:77019030..77019042,+ | ||
|ontology_enrichment_celltype=CL:0002494!1.74e-20!16;CL:0000746!3.17e-10!3;CL:0000513!3.17e-10!3;CL:0000737!9.54e-08!4;CL:0002195!4.30e-07!2;CL:0002571!4.30e-07!2;CL:0000569!6.20e-07!4;CL:0000011!6.20e-07!4 | |ontology_enrichment_celltype=CL:0002494!1.74e-20!16;CL:0000746!3.17e-10!3;CL:0000513!3.17e-10!3;CL:0000737!9.54e-08!4;CL:0002195!4.30e-07!2;CL:0002571!4.30e-07!2;CL:0000569!6.20e-07!4;CL:0000011!6.20e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000746;6.50e-24;3!CL:0002494;1.35e-22;16!CL:0000737;4.28e-18;4!CL:0002548;6.01e-12;6!CL:0000632;6.00e-11;3!CL:0000511;7.85e-09;1!CL:0002625;7.85e-09;1!CL:0000216;7.85e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,6.26e-24,3;CL:0000513,6.26e-24,3;CL:0002494,1.52e-22,16;CL:0000737,4.16e-18,4;CL:0002548,7.83e-12,6;CL:0000632,6.65e-11,3;CL:0000511,5.75e-09,1;CL:0002625,5.75e-09,1;CL:0000216,5.75e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000513;6.50e-24;3!UBERON:0005754;1.88e-09;1!UBERON:0010226;2.13e-09;1!UBERON:0010227;2.71e-09;1!UBERON:0000358;4.19e-09;1!UBERON:0005062;7.00e-09;4!UBERON:0007284;7.00e-09;4 | |||
|ontology_enrichment_disease=DOID:114!1.31e-07!2 | |ontology_enrichment_disease=DOID:114!1.31e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;3.43e-17;2!DOID:178;2.13e-09;1!DOID:326;2.13e-09;1!DOID:3978;2.13e-09;1!DOID:3394;2.13e-09;1!DOID:5844;2.13e-09;1!DOID:1287;4.82e-09;4!DOID:3571;7.85e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.57e-17,2;DOID:178,2.22e-09,1;DOID:326,2.22e-09,1;DOID:3978,2.22e-09,1;DOID:3394,2.22e-09,1;DOID:5844,2.22e-09,1;DOID:1287,4.92e-09,4;DOID:3571,1.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.91e-40!27;UBERON:0000948!2.06e-32!24;UBERON:0005498!2.06e-32!24;UBERON:0004140!2.06e-32!24;UBERON:0009881!2.06e-32!24;UBERON:0004141!2.06e-32!24;UBERON:0003084!2.06e-32!24;UBERON:0007005!2.06e-32!24;UBERON:0004139!2.06e-32!24;UBERON:0004291!2.06e-32!24;UBERON:0003103!2.07e-22!69;UBERON:0004872!4.43e-20!84;UBERON:0003914!7.11e-17!118;UBERON:0001009!1.48e-15!113;UBERON:0007023!2.19e-15!115;UBERON:0004535!3.03e-12!110;UBERON:0001048!3.90e-11!168;UBERON:0000025!1.15e-10!194;UBERON:0004151!1.58e-10!3;UBERON:0004111!2.01e-10!241;UBERON:0000477!8.10e-10!286;UBERON:0000483!2.13e-09!309;UBERON:0000119!3.34e-09!312;UBERON:0005904!7.98e-08!4;UBERON:0000481!8.37e-08!347;UBERON:0002081!1.44e-07!2;UBERON:0002133!1.73e-07!2 | |ontology_enrichment_uberon=UBERON:0007100!1.91e-40!27;UBERON:0000948!2.06e-32!24;UBERON:0005498!2.06e-32!24;UBERON:0004140!2.06e-32!24;UBERON:0009881!2.06e-32!24;UBERON:0004141!2.06e-32!24;UBERON:0003084!2.06e-32!24;UBERON:0007005!2.06e-32!24;UBERON:0004139!2.06e-32!24;UBERON:0004291!2.06e-32!24;UBERON:0003103!2.07e-22!69;UBERON:0004872!4.43e-20!84;UBERON:0003914!7.11e-17!118;UBERON:0001009!1.48e-15!113;UBERON:0007023!2.19e-15!115;UBERON:0004535!3.03e-12!110;UBERON:0001048!3.90e-11!168;UBERON:0000025!1.15e-10!194;UBERON:0004151!1.58e-10!3;UBERON:0004111!2.01e-10!241;UBERON:0000477!8.10e-10!286;UBERON:0000483!2.13e-09!309;UBERON:0000119!3.34e-09!312;UBERON:0005904!7.98e-08!4;UBERON:0000481!8.37e-08!347;UBERON:0002081!1.44e-07!2;UBERON:0002133!1.73e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.56e-58;25!UBERON:0000948;1.42e-40;22!UBERON:0004151;1.11e-24;3!UBERON:0005904;3.20e-18;4!UBERON:0002081;4.72e-17;2!UBERON:0002133;7.30e-17;2!UBERON:0006947;1.18e-11;3!UBERON:0004054;1.18e-11;3!UBERON:0003978;1.49e-11;3!UBERON:0000946;1.49e-11;3!UBERON:0002134;1.74e-09;1!UBERON:0005208;1.74e-09;1!UBERON:0004145;1.74e-09;1!UBERON:0005946;1.74e-09;1!UBERON:0005965;1.74e-09;1!UBERON:0002078;1.74e-09;1!UBERON:0000998;1.88e-09;1!UBERON:0006868;1.88e-09;1!UBERON:0002084;2.13e-09;1!UBERON:0002082;2.13e-09;1!UBERON:0002079;2.71e-09;1!UBERON:0001000;2.71e-09;1!UBERON:0005352;2.71e-09;1!UBERON:0002135;4.19e-09;1!UBERON:0001136;7.85e-09;1!UBERON:0001343;7.85e-09;1!UBERON:0004910;7.85e-09;1!UBERON:0004813;7.85e-09;1!UBERON:0003103;8.85e-09;61!UBERON:0000058;1.35e-07;10!UBERON:0003135;6.06e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.33e-54,27;UBERON:0000948,5.24e-37,24;UBERON:0005498,5.24e-37,24;UBERON:0004140,5.24e-37,24;UBERON:0009881,5.24e-37,24;UBERON:0004141,5.24e-37,24;UBERON:0003084,5.24e-37,24;UBERON:0007005,5.24e-37,24;UBERON:0004139,5.24e-37,24;UBERON:0004291,5.24e-37,24;UBERON:0004151,1.02e-24,3;UBERON:0003103,5.28e-23,68;UBERON:0005904,2.61e-18,4;UBERON:0002081,4.54e-17,2;UBERON:0010227,4.54e-17,2;UBERON:0002133,7.30e-17,2;UBERON:0004872,1.43e-15,83;UBERON:0001009,7.99e-13,112;UBERON:0001048,3.27e-12,160;UBERON:0003914,5.51e-12,117;UBERON:0006947,1.21e-11,3;UBERON:0004054,1.21e-11,3;UBERON:0003978,1.49e-11,3;UBERON:0009751,1.49e-11,3;UBERON:0000946,1.49e-11,3;UBERON:0002523,1.49e-11,3;UBERON:0005983,1.49e-11,3;UBERON:0002165,1.49e-11,3;UBERON:0002062,1.49e-11,3;UBERON:0007280,1.49e-11,3;UBERON:0002134,1.74e-09,1;UBERON:0005208,1.74e-09,1;UBERON:0005946,1.74e-09,1;UBERON:0005965,1.74e-09,1;UBERON:0002078,1.74e-09,1;UBERON:0000998,1.89e-09,1;UBERON:0006868,1.89e-09,1;UBERON:0002084,2.04e-09,1;UBERON:0002082,2.04e-09,1;UBERON:0010226,2.04e-09,1;UBERON:0002079,2.60e-09,1;UBERON:0001000,2.82e-09,1;UBERON:0005352,2.82e-09,1;UBERON:0002135,4.19e-09,1;UBERON:0001136,5.75e-09,1;UBERON:0001343,5.75e-09,1;UBERON:0004910,5.75e-09,1;UBERON:0005154,5.75e-09,1;UBERON:0005295,5.75e-09,1;UBERON:0004813,5.75e-09,1;UBERON:0005297,5.75e-09,1;UBERON:0005294,5.75e-09,1;UBERON:0010141,5.75e-09,1;UBERON:0005891,5.75e-09,1;UBERON:0004535,4.43e-08,109;UBERON:0003081,8.72e-08,203;UBERON:0004111,4.84e-07,240;UBERON:0003135,5.65e-07,11 | |||
|phase1_expression=0.181678379270557,0.428201047781966,1.40954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,6.70700859703636,1.2786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,2.17847724779836,1.0776853765575,1.14423332179421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857867961948885,2.71310802695722,0,0,2.13235169245527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.924100740528266,0,0,0,0.286249773483982,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0.404364963146632,1.58510321173008,0,0,0,0,0,0,0,0,1.99031692572366,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,5.12959723704208,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,0,9.33234931949858,7.18844401796368,23.1782065993748,4.01708623395371,0.806201669840715,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,5.71756261098694,7.28301167401975,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0.919036730290385,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756154618816195,0.310874401165561,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,8.04435395362765,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,1.12780701575824,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,1.0820016907288,0.202117188958219,0,0,0,0.286888821570705,0,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.428201047781966,1.40954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,6.70700859703636,1.2786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,2.17847724779836,1.0776853765575,1.14423332179421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857867961948885,2.71310802695722,0,0,2.13235169245527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.924100740528266,0,0,0,0.286249773483982,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0.404364963146632,1.58510321173008,0,0,0,0,0,0,0,0,1.99031692572366,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,5.12959723704208,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,0,9.33234931949858,7.18844401796368,23.1782065993748,4.01708623395371,0.806201669840715,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,5.71756261098694,7.28301167401975,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0.919036730290385,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756154618816195,0.310874401165561,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,8.04435395362765,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,1.12780701575824,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,1.0820016907288,0.202117188958219,0,0,0,0.286888821570705,0,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr17:77019030..77019042,+ | |short_description=p@chr17:77019030..77019042,+ | ||
}} | }} |
Latest revision as of 22:11, 25 July 2015
Short description: | p@chr17:77019030..77019042, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77019030..77019042, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 6.26e-24 | 3 |
cardiac muscle myoblast | 6.26e-24 | 3 |
cardiocyte | 1.52e-22 | 16 |
striated muscle cell | 4.16e-18 | 4 |
cardiac fibroblast | 7.83e-12 | 6 |
hepatic stellate cell | 6.65e-11 | 3 |
androgen binding protein secreting cell | 5.75e-09 | 1 |
seminiferous tubule epithelial cell | 5.75e-09 | 1 |
Sertoli cell | 5.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.57e-17 | 2 |
vascular disease | 2.22e-09 | 1 |
ischemia | 2.22e-09 | 1 |
extrinsic cardiomyopathy | 2.22e-09 | 1 |
myocardial ischemia | 2.22e-09 | 1 |
myocardial infarction | 2.22e-09 | 1 |
cardiovascular system disease | 4.92e-09 | 4 |
liver cancer | 1.07e-08 | 1 |