FFCP PHASE1:Hg19::chr19:47113445..47113466,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:47113445..47113466,+
|short_description=p@chr19:47113445..47113466,+
|description=CAGE_peak_at_chr19:47113445..47113466,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:47113445..47113466,+ | |||
|coexpression_cluster_id=C1456 | |||
|description=CAGE_peak_at_chr19:47113445..47113466,+ | |||
|id=chr19:47113445..47113466,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.63e-14!32;UBERON:0001049!1.29e-13!57;UBERON:0005068!1.29e-13!57;UBERON:0006241!1.29e-13!57;UBERON:0007135!1.29e-13!57;UBERON:0002616!1.38e-13!59;UBERON:0002020!1.40e-13!34;UBERON:0003528!1.40e-13!34;UBERON:0000956!2.71e-13!25;UBERON:0000203!2.71e-13!25;UBERON:0002619!2.95e-13!22;UBERON:0003075!3.03e-13!86;UBERON:0007284!3.03e-13!86;UBERON:0001893!4.19e-13!34;UBERON:0002791!1.52e-12!33;UBERON:0001017!1.71e-12!82;UBERON:0002346!2.51e-12!90;UBERON:0005743!2.64e-12!86;UBERON:0001950!2.77e-12!20;UBERON:0000955!3.69e-11!69;UBERON:0006238!3.69e-11!69;UBERON:0007023!8.09e-11!115;UBERON:0002780!8.14e-11!41;UBERON:0001890!8.14e-11!41;UBERON:0006240!8.14e-11!41;UBERON:0003080!1.13e-10!42;UBERON:0003056!2.40e-10!61;UBERON:0000119!2.36e-09!312;UBERON:0000073!2.73e-09!94;UBERON:0001016!2.73e-09!94;UBERON:0000483!3.96e-09!309;UBERON:0000033!2.99e-08!123;UBERON:0000477!3.11e-08!286;UBERON:0000153!9.37e-08!129;UBERON:0007811!9.37e-08!129;UBERON:0004121!1.66e-07!169;UBERON:0000924!3.80e-07!173;UBERON:0006601!3.80e-07!173;UBERON:0000475!5.93e-07!365;UBERON:0000481!6.14e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.51e-17;22!UBERON:0000956;2.13e-16;25!UBERON:0000203;2.13e-16;25!UBERON:0001869;2.98e-16;32!UBERON:0001950;3.74e-16;20!UBERON:0003528;3.63e-15;34!UBERON:0002020;3.63e-15;34!UBERON:0002791;6.57e-15;32!UBERON:0001893;1.58e-14;34!UBERON:0002780;1.47e-10;41!UBERON:0001890;1.47e-10;41!UBERON:0000073;3.27e-10;53!UBERON:0002616;3.27e-10;53!UBERON:0000955;4.27e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.84e-19,53;UBERON:0002616,3.84e-19,53;UBERON:0001869,3.70e-18,32;UBERON:0001049,5.45e-18,56;UBERON:0005068,5.45e-18,56;UBERON:0006241,5.45e-18,56;UBERON:0007135,5.45e-18,56;UBERON:0002619,2.28e-17,22;UBERON:0003528,3.23e-17,34;UBERON:0002020,3.23e-17,34;UBERON:0000956,1.24e-16,25;UBERON:0000203,1.24e-16,25;UBERON:0002791,1.80e-16,32;UBERON:0001893,2.31e-16,34;UBERON:0003075,3.63e-16,82;UBERON:0007284,3.63e-16,82;UBERON:0001950,4.73e-16,20;UBERON:0002346,3.18e-15,86;UBERON:0001017,6.24e-15,81;UBERON:0000955,7.64e-15,68;UBERON:0006238,7.64e-15,68;UBERON:0002780,7.93e-15,41;UBERON:0001890,7.93e-15,41;UBERON:0003080,7.93e-15,41;UBERON:0006240,7.93e-15,41;UBERON:0010371,8.53e-14,104;UBERON:0003056,2.44e-13,61;UBERON:0001016,3.66e-12,89;UBERON:0010314,2.55e-10,132;UBERON:0007023,3.91e-10,114;UBERON:0000119,4.04e-09,309;UBERON:0000483,5.40e-09,306;UBERON:0004121,7.77e-09,171;UBERON:0000924,7.77e-09,171;UBERON:0006601,7.77e-09,171;UBERON:0000025,8.38e-08,192;UBERON:0004111,5.99e-07,240 | |||
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| ||
|short_description=p@chr19:47113445..47113466,+ | |||
}} | }} |
Latest revision as of 15:19, 27 July 2015
Short description: | p@chr19:47113445..47113466, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47113445..47113466, + |
Coexpression cluster: | C1456_medial_amygdala_brain_hippocampus_occipital_putamen_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data