FFCP PHASE1:Hg19::chr1:19414386..19414391,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:19414386..19414391,- to FFCP PHASE1:Hg19::chr1:19414386..19414391,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:19414386..19414391,- | |||
|description=CAGE_peak_at_chr1:19414386..19414391,- | |||
|id=chr1:19414386..19414391,- | |||
|ontology_enrichment_celltype=CL:1000497!7.29e-11!18;CL:0002518!7.29e-11!18;CL:1000507!2.11e-08!12;CL:1000494!2.11e-08!12;CL:1000449!7.30e-08!16;CL:0000128!1.79e-07!7;CL:0000126!1.79e-07!7;CL:0000127!1.79e-07!7;CL:0002453!1.79e-07!7;CL:0002605!4.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000650;2.82e-21;2!CL:1000500;2.82e-21;2!CL:1000618;2.82e-21;2!CL:1001318;2.82e-21;2!CL:0002173;2.82e-21;2!CL:1000497;1.30e-14;17!CL:0002518;1.30e-14;17!CL:0000945;1.53e-14;24!CL:1000746;1.53e-13;7!CL:1000612;1.53e-13;7!CL:0000946;2.96e-11;1!CL:0000786;2.96e-11;1!CL:0000669;4.02e-11;4!CL:1000449;6.24e-11;15!CL:1000507;1.21e-09;10!CL:1000494;1.21e-09;10!CL:0000453;4.96e-09;5!CL:0002681;4.05e-08;12!CL:0002584;4.05e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,2.55e-21,2;CL:1000500,2.55e-21,2;CL:1000618,2.55e-21,2;CL:1001318,2.55e-21,2;CL:0002173,2.55e-21,2;CL:0000945,1.41e-14,24;CL:0000826,1.41e-14,24;CL:1000497,1.46e-14,17;CL:0002518,1.46e-14,17;CL:1000746,1.66e-13,7;CL:1000612,1.66e-13,7;CL:0000946,1.78e-11,1;CL:0000786,1.78e-11,1;CL:0000980,1.78e-11,1;CL:0000669,3.83e-11,4;CL:1000449,7.30e-11,15;CL:1000507,1.32e-09,10;CL:1000494,1.32e-09,10;CL:0000453,4.15e-09,5;CL:0002681,4.25e-08,12;CL:0002584,4.25e-08,12;CL:0000988,1.83e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.30e-09;10!UBERON:0007687;1.30e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;2.96e-11;1!DOID:0050177;2.96e-11;1!DOID:0050427;2.96e-11;1!DOID:2355;2.96e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.28e-11,1;DOID:0050177,3.28e-11,1;DOID:0050427,3.28e-11,1;DOID:2355,5.43e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.28e-11!27;UBERON:0003918!2.28e-11!27;UBERON:0005095!2.28e-11!27;UBERON:0007687!2.28e-11!27;UBERON:0006554!2.86e-11!44;UBERON:0001008!6.49e-11!45;UBERON:0005172!2.63e-09!55;UBERON:0005173!2.63e-09!55;UBERON:0003064!3.52e-09!37;UBERON:0000489!4.56e-09!32;UBERON:0003887!2.03e-08!21;UBERON:0009773!2.11e-08!12;UBERON:0001231!2.11e-08!12;UBERON:0004810!2.11e-08!12;UBERON:0002417!6.41e-08!61;UBERON:0000916!6.41e-08!61;UBERON:0004211!7.30e-08!16;UBERON:0001285!7.30e-08!16;UBERON:0007684!7.30e-08!16;UBERON:0003220!7.30e-08!16;UBERON:0004208!7.30e-08!16;UBERON:0006555!2.63e-07!17;UBERON:0005103!2.63e-07!17;UBERON:0000083!2.63e-07!17;UBERON:0009201!2.63e-07!17;UBERON:0004819!2.63e-07!17;UBERON:0006553!2.63e-07!17;UBERON:0003074!2.63e-07!17;UBERON:0003060!2.63e-07!17;UBERON:0000080!8.19e-07!18;UBERON:0002120!8.19e-07!18;UBERON:0004875!8.19e-07!18;UBERON:0005721!8.19e-07!18;UBERON:0005754!8.19e-07!18;UBERON:0007297!8.19e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;2.82e-21;2!UBERON:0003838;2.82e-21;2!UBERON:0003586;2.82e-21;2!UBERON:0005169;2.82e-21;2!UBERON:0002321;2.82e-21;2!UBERON:0005215;2.82e-21;2!UBERON:0002303;2.82e-21;2!UBERON:0002319;2.82e-21;2!UBERON:0002113;9.39e-20;24!UBERON:0011143;9.39e-20;24!UBERON:0000489;3.07e-16;29!UBERON:0006554;1.12e-15;30!UBERON:0001008;1.12e-15;30!UBERON:0000074;1.53e-13;7!UBERON:0001229;1.53e-13;7!UBERON:0003891;4.02e-11;4!UBERON:0006555;6.24e-11;15!UBERON:0004819;6.24e-11;15!UBERON:0001285;6.24e-11;15!UBERON:0007684;6.24e-11;15!UBERON:0004211;1.21e-09;10!UBERON:0009773;1.21e-09;10!UBERON:0001231;1.21e-09;10!UBERON:0004810;1.21e-09;10!UBERON:0001225;4.05e-08;12!UBERON:0008987;4.05e-08;12!UBERON:0005172;9.38e-08;52!UBERON:0005173;9.38e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,2.55e-21,2;UBERON:0003838,2.55e-21,2;UBERON:0003586,2.55e-21,2;UBERON:0005169,2.55e-21,2;UBERON:0002321,2.55e-21,2;UBERON:0005215,2.55e-21,2;UBERON:0002303,2.55e-21,2;UBERON:0002319,2.55e-21,2;UBERON:0002113,3.34e-18,26;UBERON:0003918,3.34e-18,26;UBERON:0011143,3.34e-18,26;UBERON:0005095,3.34e-18,26;UBERON:0007687,3.34e-18,26;UBERON:0000489,3.66e-15,31;UBERON:0010532,1.66e-13,7;UBERON:0000074,1.66e-13,7;UBERON:0001229,1.66e-13,7;UBERON:0001230,1.66e-13,7;UBERON:0003220,1.66e-13,7;UBERON:0005749,1.66e-13,7;UBERON:0004199,1.66e-13,7;UBERON:0004209,1.66e-13,7;UBERON:0004198,1.66e-13,7;UBERON:0005103,6.89e-12,8;UBERON:0000083,6.89e-12,8;UBERON:0009201,6.89e-12,8;UBERON:0006553,6.89e-12,8;UBERON:0003074,6.89e-12,8;UBERON:0003060,6.89e-12,8;UBERON:0003891,3.83e-11,4;UBERON:0004211,7.30e-11,15;UBERON:0009773,7.30e-11,15;UBERON:0001231,7.30e-11,15;UBERON:0001285,7.30e-11,15;UBERON:0007684,7.30e-11,15;UBERON:0004208,7.30e-11,15;UBERON:0000080,1.25e-10,9;UBERON:0002120,1.25e-10,9;UBERON:0004875,1.25e-10,9;UBERON:0005721,1.25e-10,9;UBERON:0005754,1.25e-10,9;UBERON:0007297,1.25e-10,9;UBERON:0006555,3.39e-10,16;UBERON:0004819,3.39e-10,16;UBERON:0006554,9.07e-10,47;UBERON:0004810,1.32e-09,10;UBERON:0001008,1.50e-09,48;UBERON:0004876,8.65e-09,11;UBERON:0005172,2.07e-08,54;UBERON:0005173,2.07e-08,54;UBERON:0001225,4.25e-08,12;UBERON:0008987,4.25e-08,12;UBERON:0003887,4.25e-08,12;UBERON:0002417,1.69e-07,60;UBERON:0000916,1.69e-07,60 | |||
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|short_description=p@chr1:19414386..19414391,- | |||
}} | }} |
Latest revision as of 01:45, 28 July 2015
Short description: | p@chr1:19414386..19414391, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19414386..19414391, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 2.55e-21 | 2 |
kidney interstitial cell | 2.55e-21 | 2 |
juxtaglomerular complex cell | 2.55e-21 | 2 |
renal interstitial pericyte | 2.55e-21 | 2 |
extraglomerular mesangial cell | 2.55e-21 | 2 |
lymphocyte of B lineage | 1.41e-14 | 24 |
pro-B cell | 1.41e-14 | 24 |
kidney cell | 1.46e-14 | 17 |
kidney epithelial cell | 1.46e-14 | 17 |
glomerular cell | 1.66e-13 | 7 |
kidney corpuscule cell | 1.66e-13 | 7 |
antibody secreting cell | 1.78e-11 | 1 |
plasma cell | 1.78e-11 | 1 |
plasmablast | 1.78e-11 | 1 |
pericyte cell | 3.83e-11 | 4 |
epithelial cell of nephron | 7.30e-11 | 15 |
kidney tubule cell | 1.32e-09 | 10 |
nephron tubule epithelial cell | 1.32e-09 | 10 |
Langerhans cell | 4.15e-09 | 5 |
kidney cortical cell | 4.25e-08 | 12 |
renal cortical epithelial cell | 4.25e-08 | 12 |
hematopoietic cell | 1.83e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.28e-11 | 1 |
monogenic disease | 3.28e-11 | 1 |
xeroderma pigmentosum | 3.28e-11 | 1 |
anemia | 5.43e-11 | 1 |