FFCP PHASE1:Hg19::chr1:40840233..40840259,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:40840233..40840259,- | |||
|coexpression_cluster_id=C1852 | |coexpression_cluster_id=C1852 | ||
|description=CAGE_peak_at_chr1:40840233..40840259,- | |description=CAGE_peak_at_chr1:40840233..40840259,- | ||
|id=chr1:40840233..40840259,- | |id=chr1:40840233..40840259,- | ||
|ontology_enrichment_celltype=CL:0000860;4.90e-25;33!CL:0002057;4.90e-25;33!CL:0000576;9.56e-24;48!CL:0000791;1.44e-22;18!CL:0000789;1.44e-22;18!CL:0002419;1.44e-22;18!CL:0002087;5.14e-20;104!CL:0000766;7.94e-20;69!CL:0000473;8.58e-17;39!CL:0000234;8.58e-17;39!CL:0000084;1.68e-16;25!CL:0000542;1.50e-15;53!CL:0000738;1.53e-15;136!CL:0000625;2.81e-15;11!CL:0000236;8.20e-15;13!CL:0000094;1.17e-12;8!CL:0000988;5.21e-12;177!CL:0000624;1.27e-10;6!CL:0002393;1.07e-09;6!CL:0002397;1.07e-09;6!CL:0000763;1.50e-09;100!CL:0000081;1.14e-08;11!CL:0000219;1.42e-08;193!CL:0000945;1.16e-07;24 | |ontology_enrichment_celltype=CL:0000738!3.04e-55!140;CL:0000037!3.71e-52!172;CL:0000566!3.71e-52!172;CL:0000988!5.22e-50!182;CL:0002032!4.01e-49!165;CL:0000837!4.01e-49!165;CL:0002031!1.87e-44!124;CL:0002087!1.67e-42!119;CL:0000838!1.54e-24!52;CL:0000542!1.78e-24!53;CL:0000051!1.78e-24!53;CL:0000763!1.03e-23!112;CL:0000049!1.03e-23!112;CL:0000766!3.51e-23!76;CL:0002057!1.73e-22!42;CL:0000860!5.07e-21!45;CL:0000557!1.42e-18!71;CL:0000839!2.04e-18!70;CL:0002009!3.82e-17!65;CL:0002194!4.76e-16!63;CL:0000576!4.76e-16!63;CL:0000040!4.76e-16!63;CL:0000559!4.76e-16!63;CL:0000134!6.64e-16!358;CL:0002320!7.77e-15!365;CL:0000791!1.79e-13!18;CL:0000789!1.79e-13!18;CL:0002420!1.79e-13!18;CL:0002419!1.79e-13!18;CL:0000790!1.79e-13!18;CL:0000945!6.98e-12!24;CL:0000826!6.98e-12!24;CL:0000219!8.93e-12!390;CL:0000084!1.18e-11!25;CL:0000827!1.18e-11!25;CL:0000236!2.62e-09!14;CL:0000625!1.40e-08!11;CL:0000048!1.28e-07!430;CL:0000094!2.80e-07!8;CL:0002393!4.46e-07!9;CL:0002397!4.46e-07!9;CL:0000723!4.90e-07!436 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;4.90e-25;33!CL:0002057;4.90e-25;33!CL:0000576;9.56e-24;48!CL:0000791;1.44e-22;18!CL:0000789;1.44e-22;18!CL:0002419;1.44e-22;18!CL:0002087;5.14e-20;104!CL:0000766;7.94e-20;69!CL:0000473;8.58e-17;39!CL:0000234;8.58e-17;39!CL:0000084;1.68e-16;25!CL:0000542;1.50e-15;53!CL:0000738;1.53e-15;136!CL:0000625;2.81e-15;11!CL:0000236;8.20e-15;13!CL:0000094;1.17e-12;8!CL:0000988;5.21e-12;177!CL:0000624;1.27e-10;6!CL:0002393;1.07e-09;6!CL:0002397;1.07e-09;6!CL:0000763;1.50e-09;100!CL:0000081;1.14e-08;11!CL:0000219;1.42e-08;193!CL:0000945;1.16e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.56e-79,136;CL:0000037,4.00e-63,168;CL:0002031,6.17e-63,120;CL:0002087,2.49e-61,115;CL:0002032,4.44e-60,161;CL:0000837,4.44e-60,161;CL:0000988,2.02e-58,177;CL:0000766,1.89e-44,72;CL:0000860,1.17e-38,42;CL:0002057,1.17e-38,42;CL:0000557,1.02e-35,67;CL:0002009,5.06e-33,61;CL:0000839,8.74e-33,66;CL:0000763,2.11e-32,108;CL:0000049,2.11e-32,108;CL:0000473,2.98e-32,48;CL:0000234,2.98e-32,48;CL:0002194,7.97e-31,59;CL:0000576,7.97e-31,59;CL:0000040,7.97e-31,59;CL:0000559,7.97e-31,59;CL:0000838,1.20e-25,52;CL:0000542,6.01e-25,53;CL:0000051,6.01e-25,53;CL:0000791,1.65e-22,18;CL:0000789,1.65e-22,18;CL:0002420,1.65e-22,18;CL:0002419,1.65e-22,18;CL:0000790,1.65e-22,18;CL:0000134,1.70e-17,354;CL:0002320,1.25e-16,361;CL:0000084,1.68e-16,25;CL:0000827,1.68e-16,25;CL:0000625,3.11e-15,11;CL:0000219,1.32e-13,386;CL:0000236,2.05e-13,14;CL:0000094,1.04e-12,8;CL:0002393,2.57e-12,9;CL:0002397,2.57e-12,9;CL:0000624,1.31e-10,6;CL:0000048,5.12e-10,427;CL:0000723,1.55e-09,433;CL:0000034,2.17e-09,441;CL:0000081,1.05e-08,11;CL:0000945,1.31e-07,24;CL:0000826,1.31e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-26;42!CL:0000790;1.44e-22;18!CL:0000051;1.50e-15;53!CL:0000049;5.93e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;6.04e-12;15!UBERON:0000179;6.04e-12;15!UBERON:0000463;6.04e-12;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.57e-25!102;UBERON:0003061!3.57e-25!102;UBERON:0002193!1.54e-22!112;UBERON:0002384!2.05e-15!375;UBERON:0002371!3.31e-15!80;UBERON:0001474!2.55e-14!86;UBERON:0002405!2.17e-12!115;UBERON:0004765!3.34e-12!101;UBERON:0001434!3.34e-12!101;UBERON:0000178!3.54e-09!15;UBERON:0000179!3.54e-09!15;UBERON:0000463!3.54e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.04e-12;15!UBERON:0000179;6.04e-12;15!UBERON:0000463;6.04e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.00e-41,98;UBERON:0003061,7.00e-41,98;UBERON:0002193,1.03e-36,108;UBERON:0002371,9.96e-30,76;UBERON:0002405,1.23e-26,93;UBERON:0001474,1.77e-26,82;UBERON:0004765,7.68e-23,90;UBERON:0001434,3.82e-19,100;UBERON:0002384,1.89e-15,371;UBERON:0000178,7.85e-12,15;UBERON:0000179,7.85e-12,15;UBERON:0000463,7.85e-12,15;UBERON:0003081,3.76e-11,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0.764134057479513,0.821005894499457,1.41679406364623,5.11373559903575,3.83829398097213,4.18003532953405,0,0,0,0.309868802321207,0.568676929949686,0,5.53995408531877,10.0272223735071,6.72733699219141,0.895661896959697,1.29557466407592,1.03030227053675,1.59938062657521,0.377875943688809,0.970336244751265,1.85943229524548,1.23350366406548,2.47765096716083,7.76769459269806,13.0641960329841,8.0403958162119,3.7922024881028,1.93645405075148,4.06279459783025,0.376484679085209,0,0,4.59125838556354,3.85114832491312,5.11469700639233,3.29851300186716,5.58498241340569,3.40979800426155,1.7412554317715,2.8369261234557,2.4912889959823,8.54245461872927,14.0800387973454,6.73285418585862,3.63239701580021,4.05105399586321,2.21523671208619,3.59133986730301,7.44115049877652,5.2414661377094,3.59451619668784,2.70318407114711,4.98249318760948,1.42506371870624,2.98375015798635,1.27864907635244,5.27988733383968,6.55366333514558,3.55803701545422,2.56038133539904,8.40831572775626,5.74752439954483,7.27149360063348,7.63243003628291,9.67662047486062,2.34894875748376,2.6759125968766,0,3.92355994087075,0,14.3598132183098,13.7553766962208,9.86887195197644,0.668745981562712,6.19252306603822,10.8892995318989,9.74133642039557,2.22820913770347,6.18672405697158,5.98141515375777,4.33286182024025,2.0494611156108,2.60118695119756,1.47994114143309,2.21080014228679,3.18783394308558,11.7146384898028,8.02622484269139,11.4989076185474,1.13309342697566,13.4127172760672,7.21617635513523,10.6268270648191,3.18565414324097,4.55758417699493,4.75226022224187,3.46322773878877,8.95906278080929,2.49861453104692,3.55165878066025,3.28451198768419,5.24177532384304,8.82552646085574,7.82051780967114,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0.26591592103773,2.14641561874808,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,7.75560528296651,0.436094052142534,0.496971951695318,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0.910161361938026,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0.882926198829301,0,0.171567810298526,0.109750285408626,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.088048434013226,4.97587477297853,7.63835753109896,1.76739406796932,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.896681151948218,6.69904584686553,13.8001647910091,9.49738468470138,0.254094624222463,0,0,0,0,21.7212036944683,26.9245313283622,22.7928532389819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,12.2957094466612,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0.457847324091717,0.330037999682352,0,0,0,0,0.308097234229289,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.178064071293475,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,6.117097657139,2.84823593587081,4.04994018278241,4.52498500394814,3.8908398671563,1.08006287447623,6.34500141035416,0,0,0,0.185803175125719,1.00988449083511,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0.280797178113459,0.456469358066384,0.156679895773023,0,0,0.481764225311099,0.201799707191048,0,0.687010689511529,1.53620382154229,1.56573275524691,0.834245708559542,0.19538809540204,0,0,0,0.33307196799782,0,0.18714054040822,0.146508179271894,0,0.780103689942349,0,0,0,0.307160702099232,0,1.40669416410513,0,0.988823245360557,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0.738508832766417,0.311039587661807,0,0,1.02314474045374,0.295930216910801,2.3948309234694,0,0,0.463840490809256,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0.583209226766509,0.347249989866585,0,0.60298219312704,3.05163472634166,1.54810963903714,0.295547618953547,0,0,0,0,0.113942055847001,0.23056390438806,0,0,0.957003479195758,0,0.533034776018635,0,0.470940769185074,0,0.676786981851542,0.784250137270958,1.34257269580674,0.189753732724185,0.158936578980379,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0.593042257361244,0.494255755786011,0.313265848516366,0.067401132980677,0,0,0.547364367646998,0,0.242780379534093,0.394584402849391,0,0,1.13735843331278,0.300646838828985,0,0,0,0,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| ||
|short_description=p@chr1:40840233..40840259,- | |short_description=p@chr1:40840233..40840259,- | ||
}} | }} |
Latest revision as of 08:11, 28 July 2015
Short description: | p@chr1:40840233..40840259, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:40840233..40840259, - |
Coexpression cluster: | C1852_Neutrophils_CD19_CD4_Peripheral_Eosinophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.00e-41 | 98 |
blood island | 7.00e-41 | 98 |
hemolymphoid system | 1.03e-36 | 108 |
bone marrow | 9.96e-30 | 76 |
immune system | 1.23e-26 | 93 |
bone element | 1.77e-26 | 82 |
skeletal element | 7.68e-23 | 90 |
skeletal system | 3.82e-19 | 100 |
connective tissue | 1.89e-15 | 371 |
blood | 7.85e-12 | 15 |
haemolymphatic fluid | 7.85e-12 | 15 |
organism substance | 7.85e-12 | 15 |
lateral plate mesoderm | 3.76e-11 | 203 |