FFCP PHASE1:Hg19::chr2:177042846..177042858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=401bp_to_ENST00000426615_5end | |association_with_transcript=401bp_to_ENST00000426615_5end | ||
|cluster_id=chr2:177042846..177042858,+ | |||
|description=CAGE_peak_2_at_ENST00000426615_5end | |description=CAGE_peak_2_at_ENST00000426615_5end | ||
|id=chr2:177042846..177042858,+ | |id=chr2:177042846..177042858,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.43e-21!24;CL:0000115!6.20e-21!35;CL:0002078!2.67e-15!44;CL:0000071!1.66e-14!18;CL:0002546!1.66e-14!18;CL:0002543!1.29e-12!6;CL:0000213!2.15e-10!57;CL:0000215!2.15e-10!57;CL:1000449!3.37e-10!16;CL:0000066!6.27e-10!254;CL:1000612!6.78e-10!7;CL:1000746!6.78e-10!7;CL:0000666!6.13e-09!4;CL:0002188!6.13e-09!4;CL:1000497!8.31e-09!18;CL:0002518!8.31e-09!18;CL:0002681!1.72e-08!13;CL:0002584!1.72e-08!13;CL:0005020!1.79e-08!6;CL:0002138!1.79e-08!6;CL:0005022!1.79e-08!6;CL:0000076!7.72e-08!62;CL:0000346!4.92e-07!3;CL:1000428!4.92e-07!3;CL:0002618!6.11e-07!3 | |ontology_enrichment_celltype=CL:0002139!3.43e-21!24;CL:0000115!6.20e-21!35;CL:0002078!2.67e-15!44;CL:0000071!1.66e-14!18;CL:0002546!1.66e-14!18;CL:0002543!1.29e-12!6;CL:0000213!2.15e-10!57;CL:0000215!2.15e-10!57;CL:1000449!3.37e-10!16;CL:0000066!6.27e-10!254;CL:1000612!6.78e-10!7;CL:1000746!6.78e-10!7;CL:0000666!6.13e-09!4;CL:0002188!6.13e-09!4;CL:1000497!8.31e-09!18;CL:0002518!8.31e-09!18;CL:0002681!1.72e-08!13;CL:0002584!1.72e-08!13;CL:0005020!1.79e-08!6;CL:0002138!1.79e-08!6;CL:0005022!1.79e-08!6;CL:0000076!7.72e-08!62;CL:0000346!4.92e-07!3;CL:1000428!4.92e-07!3;CL:0002618!6.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.42e-51;24!CL:0000115;9.39e-44;36!CL:0000071;5.74e-41;18!CL:0002543;5.31e-32;6!CL:0002078;1.81e-24;45!CL:0000213;1.64e-18;58!CL:0000215;1.64e-18;58!CL:0000123;6.73e-17;2!CL:0000242;6.73e-17;2!CL:0002188;1.83e-14;5!CL:0002138;3.81e-12;6!CL:0000076;7.17e-12;63!CL:0002144;1.74e-11;3!CL:0002618;2.93e-11;3!CL:0000346;4.89e-11;3!CL:1000428;4.89e-11;3!CL:1000746;1.74e-10;7!CL:1000612;1.74e-10;7!CL:1001319;3.05e-09;1!CL:1000600;3.05e-09;1!CL:1000413;4.11e-08;9!CL:0000312;2.79e-07;5!CL:0002559;5.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.31e-51,24;CL:0000115,1.79e-51,36;CL:0000071,5.53e-41,18;CL:0002546,5.53e-41,18;CL:0002078,1.29e-40,45;CL:0002543,6.47e-32,6;CL:0000213,7.17e-31,58;CL:0000215,7.17e-31,58;CL:0000076,2.52e-18,63;CL:0000242,6.23e-17,2;CL:0002188,2.20e-14,5;CL:0000222,2.84e-13,121;CL:0000066,3.18e-12,253;CL:0005020,3.67e-12,6;CL:0002138,3.67e-12,6;CL:0005022,3.67e-12,6;CL:0002144,1.94e-11,3;CL:0000346,3.60e-11,3;CL:1000428,3.60e-11,3;CL:0002618,3.79e-11,3;CL:1000746,1.99e-10,7;CL:1000612,1.99e-10,7;CL:1001319,2.60e-09,1;CL:1000600,2.60e-09,1;CL:0002321,1.29e-08,250;CL:1000413,3.55e-08,9;CL:0000312,2.70e-07,5;CL:0002559,4.85e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;5.74e-41;18!CL:0005022;3.81e-12;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;3.57e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.29e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.66e-14!18;UBERON:0004638!1.66e-14!18;UBERON:0004852!1.66e-14!18;UBERON:0000487!3.62e-13!22;UBERON:0006914!3.76e-11!25;UBERON:0000489!8.47e-11!32;UBERON:0001638!1.57e-10!9;UBERON:0003920!1.57e-10!9;UBERON:0004582!1.57e-10!9;UBERON:0004211!3.37e-10!16;UBERON:0001285!3.37e-10!16;UBERON:0007684!3.37e-10!16;UBERON:0003220!3.37e-10!16;UBERON:0004208!3.37e-10!16;UBERON:0002113!4.33e-10!27;UBERON:0003918!4.33e-10!27;UBERON:0005095!4.33e-10!27;UBERON:0007687!4.33e-10!27;UBERON:0000074!6.78e-10!7;UBERON:0001229!6.78e-10!7;UBERON:0001230!6.78e-10!7;UBERON:0005749!6.78e-10!7;UBERON:0004199!6.78e-10!7;UBERON:0004209!6.78e-10!7;UBERON:0004198!6.78e-10!7;UBERON:0006555!1.84e-09!17;UBERON:0005103!1.84e-09!17;UBERON:0000083!1.84e-09!17;UBERON:0009201!1.84e-09!17;UBERON:0004819!1.84e-09!17;UBERON:0006553!1.84e-09!17;UBERON:0003074!1.84e-09!17;UBERON:0003060!1.84e-09!17;UBERON:0000080!8.31e-09!18;UBERON:0002120!8.31e-09!18;UBERON:0004875!8.31e-09!18;UBERON:0005721!8.31e-09!18;UBERON:0005754!8.31e-09!18;UBERON:0007297!8.31e-09!18;UBERON:0003887!1.37e-08!21;UBERON:0001225!1.72e-08!13;UBERON:0008987!1.72e-08!13;UBERON:0004876!1.07e-07!20;UBERON:0000412!4.92e-07!3;UBERON:0001992!4.92e-07!3;UBERON:0006554!8.93e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.74e-41;18!UBERON:0001986;5.74e-41;18!UBERON:0004852;5.74e-41;18!UBERON:0000487;3.03e-33;22!UBERON:0006914;4.52e-29;25!UBERON:0001638;2.54e-21;9!UBERON:0003920;2.54e-21;9!UBERON:0004582;2.54e-21;9!UBERON:0000490;4.40e-19;33!UBERON:0010523;1.74e-11;3!UBERON:0001915;1.74e-11;3!UBERON:0001982;1.74e-11;3!UBERON:0000412;4.89e-11;3!UBERON:0001992;4.89e-11;3!UBERON:0000074;1.74e-10;7!UBERON:0001229;1.74e-10;7!UBERON:0000055;3.26e-10;65!UBERON:0004645;3.05e-09;1!UBERON:0001256;3.05e-09;1!UBERON:0001259;3.05e-09;1!UBERON:0001473;3.09e-09;8!UBERON:0004536;3.09e-09;8!UBERON:0006558;3.09e-09;8!UBERON:0003914;6.89e-09;74!UBERON:0001003;1.84e-08;15!UBERON:0007376;1.84e-08;15!UBERON:0000025;2.24e-08;93!UBERON:0003915;4.11e-08;9!UBERON:0004700;4.11e-08;9!UBERON:0001917;4.11e-08;9!UBERON:0002049;7.13e-08;75!UBERON:0007798;7.13e-08;75!UBERON:0007500;1.25e-07;56!UBERON:0001981;1.25e-07;56!UBERON:0004537;1.25e-07;56!UBERON:0000119;1.39e-07;139!UBERON:0002465;1.75e-07;10!UBERON:0004111;3.65e-07;130!UBERON:0002066;4.29e-07;5!UBERON:0002073;5.81e-07;5!UBERON:0000483;6.50e-07;136 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.53e-41,18;UBERON:0001986,5.53e-41,18;UBERON:0004852,5.53e-41,18;UBERON:0000487,2.94e-33,22;UBERON:0006914,4.40e-29,25;UBERON:0001638,2.89e-21,9;UBERON:0003920,2.89e-21,9;UBERON:0004582,2.89e-21,9;UBERON:0000055,9.72e-17,68;UBERON:0002049,2.70e-14,78;UBERON:0007798,2.70e-14,78;UBERON:0010523,1.94e-11,3;UBERON:0001915,1.94e-11,3;UBERON:0001982,1.94e-11,3;UBERON:0007500,2.08e-11,59;UBERON:0001981,2.08e-11,59;UBERON:0004537,2.08e-11,59;UBERON:0006965,2.08e-11,59;UBERON:0000412,3.60e-11,3;UBERON:0001992,3.60e-11,3;UBERON:0010532,1.99e-10,7;UBERON:0000074,1.99e-10,7;UBERON:0001229,1.99e-10,7;UBERON:0001230,1.99e-10,7;UBERON:0003220,1.99e-10,7;UBERON:0005749,1.99e-10,7;UBERON:0004199,1.99e-10,7;UBERON:0004209,1.99e-10,7;UBERON:0004198,1.99e-10,7;UBERON:0004535,1.44e-09,109;UBERON:0004645,2.60e-09,1;UBERON:0001256,2.60e-09,1;UBERON:0001259,2.60e-09,1;UBERON:0001009,3.00e-09,112;UBERON:0001473,3.00e-09,8;UBERON:0004536,3.00e-09,8;UBERON:0006558,3.00e-09,8;UBERON:0005103,3.46e-09,8;UBERON:0000083,3.46e-09,8;UBERON:0009201,3.46e-09,8;UBERON:0006553,3.46e-09,8;UBERON:0003074,3.46e-09,8;UBERON:0003060,3.46e-09,8;UBERON:0004111,3.59e-09,240;UBERON:0003914,9.72e-09,117;UBERON:0001003,1.61e-08,15;UBERON:0007376,1.61e-08,15;UBERON:0007383,1.61e-08,15;UBERON:0000483,2.69e-08,306;UBERON:0000080,3.21e-08,9;UBERON:0002120,3.21e-08,9;UBERON:0004875,3.21e-08,9;UBERON:0005721,3.21e-08,9;UBERON:0005754,3.21e-08,9;UBERON:0007297,3.21e-08,9;UBERON:0000119,3.54e-08,309;UBERON:0003915,3.55e-08,9;UBERON:0004700,3.55e-08,9;UBERON:0001917,3.55e-08,9;UBERON:0004872,1.20e-07,83;UBERON:0002465,1.72e-07,10;UBERON:0000025,3.15e-07,192;UBERON:0002073,4.85e-07,5;UBERON:0005086,4.85e-07,5;UBERON:0002066,5.00e-07,5;UBERON:0004876,8.31e-07,11 | |||
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| ||
|short_description=p2@ENST00000426615 | |short_description=p2@ENST00000426615 | ||
}} | }} |
Latest revision as of 02:48, 29 July 2015
Short description: | p2@ENST00000426615 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000426615_5end |
Coexpression cluster: | NA |
Association with transcript: | 401bp_to_ENST00000426615_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.31e-51 | 24 |
endothelial cell | 1.79e-51 | 36 |
blood vessel endothelial cell | 5.53e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.53e-41 | 18 |
meso-epithelial cell | 1.29e-40 | 45 |
vein endothelial cell | 6.47e-32 | 6 |
lining cell | 7.17e-31 | 58 |
barrier cell | 7.17e-31 | 58 |
squamous epithelial cell | 2.52e-18 | 63 |
Merkel cell | 6.23e-17 | 2 |
glomerular endothelial cell | 2.20e-14 | 5 |
mesodermal cell | 2.84e-13 | 121 |
epithelial cell | 3.18e-12 | 253 |
lymphangioblast | 3.67e-12 | 6 |
endothelial cell of lymphatic vessel | 3.67e-12 | 6 |
vascular lymphangioblast | 3.67e-12 | 6 |
capillary endothelial cell | 1.94e-11 | 3 |
hair follicle dermal papilla cell | 3.60e-11 | 3 |
stem cell of epidermis | 3.60e-11 | 3 |
endothelial cell of umbilical vein | 3.79e-11 | 3 |
glomerular cell | 1.99e-10 | 7 |
kidney corpuscule cell | 1.99e-10 | 7 |
bladder cell | 2.60e-09 | 1 |
lower urinary tract cell | 2.60e-09 | 1 |
embryonic cell | 1.29e-08 | 250 |
endothelial cell of artery | 3.55e-08 | 9 |
keratinocyte | 2.70e-07 | 5 |
hair follicle cell | 4.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.29e-07 | 5 |