FFCP PHASE1:Hg19::chr3:100567644..100567686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:100567644..100567686,+ | |||
|coexpression_cluster_id=C404 | |coexpression_cluster_id=C404 | ||
|description=CAGE_peak_at_chr3:100567644..100567686,+ | |description=CAGE_peak_at_chr3:100567644..100567686,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!2.22e-07!75 | |ontology_enrichment_celltype=CL:0000057!2.22e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.18e-11;9!CL:0000447;2.18e-11;9!CL:0000327;3.94e-10;15!CL:0000214;2.61e-09;3!CL:0000511;1.58e-07;1!CL:0002625;1.58e-07;1!CL:0000216;1.58e-07;1!CL:0000569;3.97e-07;4 | |ontology_enrichment_celltype_v019=CL:0000153;2.18e-11;9!CL:0000447;2.18e-11;9!CL:0000327;3.94e-10;15!CL:0000214;2.61e-09;3!CL:0000511;1.58e-07;1!CL:0002625;1.58e-07;1!CL:0000216;1.58e-07;1!CL:0000569;3.97e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.12e-11,9;CL:0000447,2.12e-11,9;CL:0000327,3.48e-10,15;CL:0000214,2.51e-09,3;CL:0000511,1.74e-07,1;CL:0002625,1.74e-07,1;CL:0000216,1.74e-07,1;CL:0000151,1.86e-07,36;CL:0000569,3.85e-07,4;CL:0000011,3.85e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.03e-07;1!UBERON:0003852;2.03e-07;1!CL:0000011;3.97e-07;4 | |ontology_enrichment_development_v019=UBERON:0003099;2.03e-07;1!UBERON:0003852;2.03e-07;1!CL:0000011;3.97e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1192;3.09e-18;3!DOID:3193;1.54e-12;2!DOID:962;1.54e-12;2!DOID:3369;2.03e-07;1!DOID:1115;4.15e-07;20!DOID:2513;4.20e-07;1!DOID:4235;4.20e-07;1!DOID:3571;4.20e-07;1 | |ontology_enrichment_disease_v019=DOID:1192;3.09e-18;3!DOID:3193;1.54e-12;2!DOID:962;1.54e-12;2!DOID:3369;2.03e-07;1!DOID:1115;4.15e-07;20!DOID:2513;4.20e-07;1!DOID:4235;4.20e-07;1!DOID:3571;4.20e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1192,4.04e-18,3;DOID:3193,2.07e-12,2;DOID:962,2.07e-12,2;DOID:3369,1.97e-07,1;DOID:2513,2.52e-07,1;DOID:3571,3.02e-07,1;DOID:1115,4.48e-07,20;DOID:4235,4.89e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.61e-09;3!UBERON:0007616;2.61e-09;3!UBERON:0002217;2.61e-09;3!UBERON:0002018;2.61e-09;3!UBERON:0001136;1.58e-07;1!UBERON:0001343;1.58e-07;1!UBERON:0004910;1.58e-07;1!UBERON:0004813;1.58e-07;1!UBERON:0005705;2.03e-07;1!UBERON:0008193;2.03e-07;1!UBERON:0010912;2.03e-07;1!UBERON:0002514;2.03e-07;1!UBERON:0003457;2.03e-07;1!UBERON:0008907;2.03e-07;1!UBERON:0008001;2.03e-07;1!UBERON:0007213;2.03e-07;1!UBERON:0009891;2.03e-07;1!UBERON:0007914;2.03e-07;1!UBERON:0007375;2.03e-07;1!UBERON:0003323;2.03e-07;1!UBERON:0010258;2.03e-07;1!UBERON:0005253;2.03e-07;1!UBERON:0007842;2.03e-07;1!UBERON:0002397;2.03e-07;1!UBERON:0003113;2.03e-07;1!UBERON:0003277;2.03e-07;1!UBERON:0001709;2.03e-07;1!UBERON:0002244;2.03e-07;1!UBERON:0005620;2.03e-07;1!UBERON:0010364;2.03e-07;1!UBERON:0004288;2.03e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0006915;2.61e-09;3!UBERON:0007616;2.61e-09;3!UBERON:0002217;2.61e-09;3!UBERON:0002018;2.61e-09;3!UBERON:0001136;1.58e-07;1!UBERON:0001343;1.58e-07;1!UBERON:0004910;1.58e-07;1!UBERON:0004813;1.58e-07;1!UBERON:0005705;2.03e-07;1!UBERON:0008193;2.03e-07;1!UBERON:0010912;2.03e-07;1!UBERON:0002514;2.03e-07;1!UBERON:0003457;2.03e-07;1!UBERON:0008907;2.03e-07;1!UBERON:0008001;2.03e-07;1!UBERON:0007213;2.03e-07;1!UBERON:0009891;2.03e-07;1!UBERON:0007914;2.03e-07;1!UBERON:0007375;2.03e-07;1!UBERON:0003323;2.03e-07;1!UBERON:0010258;2.03e-07;1!UBERON:0005253;2.03e-07;1!UBERON:0007842;2.03e-07;1!UBERON:0002397;2.03e-07;1!UBERON:0003113;2.03e-07;1!UBERON:0003277;2.03e-07;1!UBERON:0001709;2.03e-07;1!UBERON:0002244;2.03e-07;1!UBERON:0005620;2.03e-07;1!UBERON:0010364;2.03e-07;1!UBERON:0004288;2.03e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.51e-09,3;UBERON:0007616,2.51e-09,3;UBERON:0002217,2.51e-09,3;UBERON:0002018,2.51e-09,3;UBERON:0001136,1.74e-07,1;UBERON:0001343,1.74e-07,1;UBERON:0004910,1.74e-07,1;UBERON:0005154,1.74e-07,1;UBERON:0005295,1.74e-07,1;UBERON:0004813,1.74e-07,1;UBERON:0005297,1.74e-07,1;UBERON:0005294,1.74e-07,1;UBERON:0010141,1.74e-07,1;UBERON:0005891,1.74e-07,1;UBERON:0005705,2.23e-07,1;UBERON:0008193,2.23e-07,1;UBERON:0010912,2.23e-07,1;UBERON:0002514,2.23e-07,1;UBERON:0003457,2.23e-07,1;UBERON:0008907,2.23e-07,1;UBERON:0008001,2.23e-07,1;UBERON:0007213,2.23e-07,1;UBERON:0009891,2.23e-07,1;UBERON:0007914,2.23e-07,1;UBERON:0009292,2.23e-07,1;UBERON:0003099,2.23e-07,1;UBERON:0007375,2.23e-07,1;UBERON:0003323,2.23e-07,1;UBERON:0010258,2.23e-07,1;UBERON:0007842,2.23e-07,1;UBERON:0009494,2.23e-07,1;UBERON:0010042,2.23e-07,1;UBERON:0010045,2.23e-07,1;UBERON:0010259,2.23e-07,1;UBERON:0010359,2.23e-07,1;UBERON:0009526,2.23e-07,1;UBERON:0002397,2.23e-07,1;UBERON:0003113,2.23e-07,1;UBERON:0003277,2.23e-07,1;UBERON:0001709,2.23e-07,1;UBERON:0004066,2.23e-07,1;UBERON:0002244,2.23e-07,1;UBERON:0005620,2.23e-07,1;UBERON:0004362,2.23e-07,1;UBERON:0010364,2.23e-07,1;UBERON:0010046,2.23e-07,1;UBERON:0005868,2.23e-07,1;UBERON:0007238,2.23e-07,1;UBERON:0004288,2.23e-07,1;UBERON:0004068,2.23e-07,1;UBERON:0010334,2.23e-07,1;UBERON:0003852,2.23e-07,1;UBERON:0010253,2.23e-07,1 | |||
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|short_description=p@chr3:100567644..100567686,+ | |short_description=p@chr3:100567644..100567686,+ | ||
}} | }} |
Latest revision as of 13:40, 29 July 2015
Short description: | p@chr3:100567644..100567686, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:100567644..100567686, + |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.12e-11 | 9 |
carbohydrate secreting cell | 2.12e-11 | 9 |
extracellular matrix secreting cell | 3.48e-10 | 15 |
synovial cell | 2.51e-09 | 3 |
androgen binding protein secreting cell | 1.74e-07 | 1 |
seminiferous tubule epithelial cell | 1.74e-07 | 1 |
Sertoli cell | 1.74e-07 | 1 |
secretory cell | 1.86e-07 | 36 |
cardiac mesenchymal cell | 3.85e-07 | 4 |
migratory trunk neural crest cell | 3.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 4.04e-18 | 3 |
peripheral nerve sheath neoplasm | 2.07e-12 | 2 |
neurofibroma | 2.07e-12 | 2 |
peripheral primitive neuroectodermal tumor | 1.97e-07 | 1 |
basal cell carcinoma | 2.52e-07 | 1 |
liver cancer | 3.02e-07 | 1 |
sarcoma | 4.48e-07 | 20 |
spindle cell sarcoma | 4.89e-07 | 1 |