FFCP PHASE1:Hg19::chr3:112081052..112081065,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:112081052..112081065,- | |||
|coexpression_cluster_id=C1896 | |||
|description=CAGE_peak_at_chr3:112081052..112081065,- | |||
|id=chr3:112081052..112081065,- | |||
|ontology_enrichment_celltype=CL:0000359!3.02e-20!32;CL:0000192!2.55e-16!42;CL:0000514!2.55e-16!42;CL:0000187!1.04e-11!54;CL:0000680!7.27e-11!57;CL:0000056!7.27e-11!57;CL:0000355!7.27e-11!57;CL:0002494!1.75e-10!16;CL:0000183!2.37e-10!59;CL:0002595!3.74e-10!5;CL:0000393!4.14e-10!60;CL:0000211!4.14e-10!60;CL:0002592!5.62e-10!3;CL:0005020!5.02e-08!6;CL:0002138!5.02e-08!6;CL:0005022!5.02e-08!6;CL:0002589!3.53e-07!2;CL:0000222!3.70e-07!119;CL:0002593!3.98e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.46e-36;32!CL:0002595;1.20e-24;5!CL:0002592;1.08e-23;3!CL:0000192;2.56e-21;43!CL:0002593;2.87e-16;2!CL:0002539;1.91e-12;10!CL:0000187;2.48e-09;55!CL:0002591;3.72e-09;1!CL:0000393;1.43e-08;61!CL:0000211;1.43e-08;61!CL:0002494;5.48e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.76e-38,32;CL:0000192,8.21e-28,43;CL:0000514,8.21e-28,43;CL:0002595,1.20e-24,5;CL:0002592,1.47e-23,3;CL:0000187,3.04e-21,55;CL:0000680,5.03e-20,58;CL:0000056,5.03e-20,58;CL:0000355,5.03e-20,58;CL:0000393,6.32e-19,61;CL:0000211,6.32e-19,61;CL:0002593,4.08e-16,2;CL:0002539,1.64e-12,10;CL:0000222,7.16e-10,121;CL:0002591,3.31e-09,1;CL:0002494,5.91e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.56e-21;43!UBERON:0005062;2.76e-18;4!UBERON:0007284;2.76e-18;4!CL:0000355;4.45e-10;58!UBERON:0004140;2.04e-09;1!UBERON:0010226;2.40e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.71e-31!27;UBERON:0001009!1.46e-29!113;UBERON:0004872!1.51e-27!84;UBERON:0004535!2.58e-25!110;UBERON:0000948!9.21e-25!24;UBERON:0005498!9.21e-25!24;UBERON:0004140!9.21e-25!24;UBERON:0009881!9.21e-25!24;UBERON:0004141!9.21e-25!24;UBERON:0003084!9.21e-25!24;UBERON:0007005!9.21e-25!24;UBERON:0004139!9.21e-25!24;UBERON:0004291!9.21e-25!24;UBERON:0000055!2.06e-24!69;UBERON:0002049!9.56e-24!79;UBERON:0007798!9.56e-24!79;UBERON:0001981!2.08e-20!60;UBERON:0007500!2.08e-20!60;UBERON:0004537!2.08e-20!60;UBERON:0006965!2.08e-20!60;UBERON:0001637!1.09e-18!42;UBERON:0003509!1.09e-18!42;UBERON:0004572!1.09e-18!42;UBERON:0003103!4.83e-18!69;UBERON:0004573!3.61e-17!33;UBERON:0004571!3.61e-17!33;UBERON:0003914!7.03e-16!118;UBERON:0003498!3.07e-15!5;UBERON:0005985!3.07e-15!5;UBERON:0002385!5.22e-15!63;UBERON:0001015!5.22e-15!63;UBERON:0000383!5.22e-15!63;UBERON:0001134!3.70e-14!61;UBERON:0002036!3.70e-14!61;UBERON:0003082!3.70e-14!61;UBERON:0004290!1.14e-11!70;UBERON:0000477!1.93e-10!286;UBERON:0003978!3.29e-10!3;UBERON:0009751!3.29e-10!3;UBERON:0000946!3.29e-10!3;UBERON:0002523!3.29e-10!3;UBERON:0005983!3.29e-10!3;UBERON:0002165!3.29e-10!3;UBERON:0002062!3.29e-10!3;UBERON:0007280!3.29e-10!3;UBERON:0003834!3.74e-10!5;UBERON:0001533!3.74e-10!5;UBERON:0001621!5.62e-10!3;UBERON:0004111!7.07e-10!241;UBERON:0004145!9.53e-10!3;UBERON:0001042!1.31e-09!10;UBERON:0009145!1.31e-09!10;UBERON:0000486!3.15e-09!82;UBERON:0000914!4.66e-09!83;UBERON:0002329!4.66e-09!83;UBERON:0003077!4.66e-09!83;UBERON:0003059!4.66e-09!83;UBERON:0007282!4.66e-09!83;UBERON:0009618!4.66e-09!83;UBERON:0007285!4.66e-09!83;UBERON:0006562!1.14e-08!11;UBERON:0000025!1.31e-08!194;UBERON:0000481!3.56e-08!347;UBERON:0003081!4.28e-08!216;UBERON:0002133!2.46e-07!2;UBERON:0001529!3.53e-07!2;UBERON:0007204!3.53e-07!2;UBERON:0002456!3.98e-07!2;UBERON:0003104!4.95e-07!238;UBERON:0009142!4.95e-07!238;UBERON:0000483!5.11e-07!309;UBERON:0007497!6.01e-07!2;UBERON:0003643!6.01e-07!2;UBERON:0003504!6.01e-07!2;UBERON:0003469!6.01e-07!2;UBERON:0003496!6.01e-07!2;UBERON:0004797!6.01e-07!2;UBERON:0002012!6.01e-07!2;UBERON:0008886!6.01e-07!2;UBERON:0007303!6.01e-07!2;UBERON:0002061!6.01e-07!2;UBERON:0005432!6.01e-07!2;UBERON:0004363!6.01e-07!2;UBERON:0002465!7.07e-07!10;UBERON:0000119!7.42e-07!312;UBERON:0001630!8.76e-07!2;UBERON:0005090!8.76e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.14e-36;25!UBERON:0004573;1.13e-30;33!UBERON:0004571;1.13e-30;33!UBERON:0000948;1.66e-27;22!UBERON:0001637;1.51e-25;42!UBERON:0003509;1.51e-25;42!UBERON:0004572;1.51e-25;42!UBERON:0003834;1.20e-24;5!UBERON:0001533;1.20e-24;5!UBERON:0003978;3.61e-24;3!UBERON:0000946;3.61e-24;3!UBERON:0003498;1.08e-23;3!UBERON:0005985;1.08e-23;3!UBERON:0001621;1.08e-23;3!UBERON:0003513;1.10e-17;7!UBERON:0002133;8.89e-17;2!UBERON:0002456;2.87e-16;2!UBERON:0007500;1.30e-13;56!UBERON:0001981;1.30e-13;56!UBERON:0004537;1.30e-13;56!UBERON:0010313;9.08e-13;10!UBERON:0004237;1.91e-12;10!UBERON:0004695;1.91e-12;10!UBERON:0002111;1.91e-12;10!UBERON:0004178;1.91e-12;10!UBERON:0000055;6.38e-12;65!UBERON:0004151;1.70e-11;3!UBERON:0002049;1.94e-10;75!UBERON:0007798;1.94e-10;75!UBERON:0002084;2.40e-09;1!UBERON:0002135;2.40e-09;1!UBERON:0002082;2.40e-09;1!UBERON:0002146;3.72e-09;1!UBERON:0002134;3.72e-09;1!UBERON:0005208;3.72e-09;1!UBERON:0005623;3.72e-09;1!UBERON:0004145;3.72e-09;1!UBERON:0005946;3.72e-09;1!UBERON:0005965;3.72e-09;1!UBERON:0002078;3.72e-09;1!UBERON:0003914;5.06e-09;74!UBERON:0000947;6.41e-09;21!UBERON:0010191;6.41e-09;21!UBERON:0001009;1.40e-08;112!UBERON:0003103;1.95e-08;61!UBERON:0001135;2.38e-08;15!UBERON:0004535;9.02e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.78e-39,27;UBERON:0004573,8.26e-37,33;UBERON:0004571,8.26e-37,33;UBERON:0007500,1.55e-34,59;UBERON:0001981,1.55e-34,59;UBERON:0004537,1.55e-34,59;UBERON:0006965,1.55e-34,59;UBERON:0004872,9.35e-34,83;UBERON:0000055,2.50e-33,68;UBERON:0001637,3.52e-33,42;UBERON:0003509,3.52e-33,42;UBERON:0004572,3.52e-33,42;UBERON:0001009,1.24e-32,112;UBERON:0000948,5.74e-31,24;UBERON:0005498,5.74e-31,24;UBERON:0004140,5.74e-31,24;UBERON:0009881,5.74e-31,24;UBERON:0004141,5.74e-31,24;UBERON:0003084,5.74e-31,24;UBERON:0007005,5.74e-31,24;UBERON:0004139,5.74e-31,24;UBERON:0004291,5.74e-31,24;UBERON:0002049,1.21e-28,78;UBERON:0007798,1.21e-28,78;UBERON:0004535,1.21e-27,109;UBERON:0003498,7.34e-25,5;UBERON:0005985,7.34e-25,5;UBERON:0003834,1.20e-24,5;UBERON:0001533,1.20e-24,5;UBERON:0003978,3.62e-24,3;UBERON:0009751,3.62e-24,3;UBERON:0000946,3.62e-24,3;UBERON:0002523,3.62e-24,3;UBERON:0005983,3.62e-24,3;UBERON:0002165,3.62e-24,3;UBERON:0002062,3.62e-24,3;UBERON:0007280,3.62e-24,3;UBERON:0001621,1.47e-23,3;UBERON:0003914,6.35e-23,117;UBERON:0003103,8.83e-20,68;UBERON:0001134,1.39e-18,62;UBERON:0002036,1.39e-18,62;UBERON:0003082,1.39e-18,62;UBERON:0004797,5.22e-18,7;UBERON:0002385,6.26e-18,64;UBERON:0001015,6.26e-18,64;UBERON:0000383,6.26e-18,64;UBERON:0003513,1.10e-17,7;UBERON:0002133,1.17e-16,2;UBERON:0002456,4.08e-16,2;UBERON:0002329,6.21e-16,71;UBERON:0003059,6.21e-16,71;UBERON:0007282,6.21e-16,71;UBERON:0004290,6.21e-16,71;UBERON:0009618,6.21e-16,71;UBERON:0003077,1.11e-15,72;UBERON:0007285,1.11e-15,72;UBERON:0007524,1.96e-15,73;UBERON:0007503,2.70e-14,78;UBERON:0000025,5.56e-14,192;UBERON:0000486,2.71e-13,83;UBERON:0004111,4.07e-13,240;UBERON:0010313,8.68e-13,10;UBERON:0002342,8.68e-13,10;UBERON:0005062,8.68e-13,10;UBERON:0004237,1.64e-12,10;UBERON:0004695,1.64e-12,10;UBERON:0002111,1.64e-12,10;UBERON:0004178,1.64e-12,10;UBERON:0003081,1.32e-11,203;UBERON:0004151,1.84e-11,3;UBERON:0004145,2.38e-11,3;UBERON:0002084,2.22e-09,1;UBERON:0002082,2.22e-09,1;UBERON:0010226,2.22e-09,1;UBERON:0003104,2.26e-09,160;UBERON:0009142,2.26e-09,160;UBERON:0002135,2.60e-09,1;UBERON:0002146,2.82e-09,1;UBERON:0005623,2.82e-09,1;UBERON:0002134,4.54e-09,1;UBERON:0005208,4.54e-09,1;UBERON:0005946,4.54e-09,1;UBERON:0005965,4.54e-09,1;UBERON:0002078,4.54e-09,1;UBERON:0000947,5.69e-09,21;UBERON:0010191,5.69e-09,21;UBERON:0001135,2.16e-08,15;UBERON:0005256,2.66e-08,122;UBERON:0000483,2.27e-07,306;UBERON:0000119,2.91e-07,309 | |||
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|short_description=p@chr3:112081052..112081065,- | |||
}} |
Latest revision as of 14:15, 29 July 2015
Short description: | p@chr3:112081052..112081065, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112081052..112081065, - |
Coexpression cluster: | C1896_Smooth_mesenchymal_heart_tongue_left_Fibroblast_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.76e-38 | 32 |
smooth muscle cell | 8.21e-28 | 43 |
smooth muscle myoblast | 8.21e-28 | 43 |
smooth muscle cell of the subclavian artery | 1.20e-24 | 5 |
smooth muscle cell of the coronary artery | 1.47e-23 | 3 |
muscle cell | 3.04e-21 | 55 |
muscle precursor cell | 5.03e-20 | 58 |
myoblast | 5.03e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.03e-20 | 58 |
electrically responsive cell | 6.32e-19 | 61 |
electrically active cell | 6.32e-19 | 61 |
smooth muscle cell of the internal thoracic artery | 4.08e-16 | 2 |
aortic smooth muscle cell | 1.64e-12 | 10 |
mesodermal cell | 7.16e-10 | 121 |
smooth muscle cell of the pulmonary artery | 3.31e-09 | 1 |
cardiocyte | 5.91e-08 | 16 |